Contig 009268:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF014M03Sequence466009268 (5)769004226 (3)emb|CAJ77510.1|3e-12putative cadmium/zinc-transporting ATPase [Solanum tuberosum]
JMSF015J05Sequence639009268 (5)778004226 (3)emb|CAJ77510.1|4e-12putative cadmium/zinc-transporting ATPase [Solanum tuberosum]
JMSF032D19Sequence732009268 (5)744004226 (3)emb|CAJ77510.1|3e-12putative cadmium/zinc-transporting ATPase [Solanum tuberosum]
JMSF039D06Sequence669009268 (5)913024644emb|CAJ77510.1|7e-12putative cadmium/zinc-transporting ATPase [Solanum tuberosum]
JMSF051O22Sequence666009268 (5)712023658emb|CAJ77510.1|7e-13putative cadmium/zinc-transporting ATPase [Solanum tuberosum]

Alignment

This contig is upended


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JMSF032D19+                                                         AGAAAAAAAATTGA
                      ____________________________________________________________
consensus                                                           AGAAAAAAAATTGA
 
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JMSF051O22+                                                             TGTTAAATAT
JMSF032D19+           TTAATGTCTAGCAACAAAACAGAATTTATACAGCAGTTTTATCAGTTGCATGTTAAATAT
JMSF039D06+                                                             TGTTAAATAT
                      ____________________________________________________________
consensus             TTAATGTCTAGCAACAAAACAGAATTTATACAGCAGTTTTATCAGTTGCATGTTAAATAT
 
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JMSF051O22+           TTAGTGCAAAAACCCTAATCTCATAGTTATATCAAAACCCTAATTCACATAAATAATCAT
JMSF032D19+           TTAGTGCAAAAACCCTAATCTCATAGTTATATCAAAACCCTAATTCACATAAATAATCAT
JMSF039D06+           TTAGTGCAAAAACCCTAATCTCATAGTTATATCAAAACCCTAATTCACATAAATAATCAT
JMSF015J05+                               TCATAGTTATATCAAAACCNTAATTCACATAAATAATCAT
                      ____________________________________________________________
consensus             TTAGTGCAAAAACCCTAATCTCATAGTTATATCAAAACCCTAATTCACATAAATAATCAT
 
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JMSF051O22+           AGGATGAAATAATCTTCCAGTTTAGACAAAATCTTAAAGAGGAATGCAAATACATAAACA
JMSF032D19+           AGGATGAAATAATCTTCCAGTTTAGACAAAATCTTAAAGAGGAATGCAAATACATAAACA
JMSF014M03+                                           CTTAAAGAGGAATGCAAATACATAAACA
JMSF039D06+           AGGATGAAATAATCTTCCAGTTTAGACAAAATCTTAAAGAGGAATGCAAATACATAAACA
JMSF015J05+           AGGATGAAATAATCTTCCAGTTTAGACAAAATCTTAAAGAGGAATGCAAATACATAAACA
                      ____________________________________________________________
consensus             AGGATGAAATAATCTTCCAGTTTAGACAAAATCTTAAAGAGGAATGCAAATACATAAACA
 
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JMSF051O22+           AATATACATTACAAGGTATGAAATAACTAAAGGAATAGGATACTTAGCTTTGTACATCCT
JMSF032D19+           AATATACATTACAAGGTATGAAATAACTAAAGGAATAGGATACTTAGCTTTGTACATCCT
JMSF014M03+           AATATACATTACAAGGTATGAAATAACTAAAGGAATAGGATACTTAGCTTTGTACATCCT
JMSF039D06+           AATATACATTACAAGGTATGAAATAACTAAAGGAATAGGATACTTAGCTTTGTACATCCT
JMSF015J05+           AATATACATTACAAGGTATGAAATAACTAAAGGAATAGGATACTTAGCTTTGTACATCCT
                      ____________________________________________________________
consensus             AATATACATTACAAGGTATGAAATAACTAAAGGAATAGGATACTTAGCTTTGTACATCCT
 
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JMSF051O22+           TGGACTGATTTGTATTCTATTAACATCTACATCATGTGAAATTAGCTGCCACGATGGTAA
JMSF032D19+           TGGACTGATTTGTATTCTATTAACATCTACATCATGTGAAATTAGCTGCCACGATGGTAA
JMSF014M03+           TGGACTGATTTGTATTCTATTAACATCTACATCATGTGAAATTAGCTGCCACGATGGTAA
JMSF039D06+           TGGACTGATTTGTATTCTATTAACATCTACATCATGTGAAATTAGCTGCCACGATGGTAA
JMSF015J05+           TGGACTGATTTGTATTCTATTAACATCTACATCATGTGAAATTAGCTGCCACGATGGTAA
                      ____________________________________________________________
consensus             TGGACTGATTTGTATTCTATTAACATCTACATCATGTGAAATTAGCTGCCACGATGGTAA
 
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JMSF051O22+           TTAGTATATGATGCACATTATTGTCTAAGCAATTTCTTATGCAAGGCATTTCGTCAAACA
JMSF032D19+           TTAGTATATGATGCACATTATTGTCTAAGCAATTTCTTATGCAAGGCATTTCGTCAAACA
JMSF014M03+           TTAGTATATGATGCACATTATTGTCTAAGCAATTTCTTATGCAAGGCATTTCGTCAAACA
JMSF039D06+           TTAGTATATGATGCACATTATTGTCTAAGCAATTTCTTATGCAAGGCATTTCGTCAAACA
JMSF015J05+           TTAGTATATGATGCACATTATTGTCTAAGCAATTTCTTATGCAAGGCATTTCGTCAAACA
                      ____________________________________________________________
consensus             TTAGTATATGATGCACATTATTGTCTAAGCAATTTCTTATGCAAGGCATTTCGTCAAACA
 
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JMSF051O22+           GTTCCGAGAATGTGTTCACCGGCGTTGAACTGCGCACCACCTCCGGGAGCTCTTTTAACA
JMSF032D19+           GTTCCGAGAATGTGTTCACCGGCGTTGAACTGCGCACCACCTCCGGGAGCTCTTTTAACA
JMSF014M03+           GTTCCGAGAATGTGTTCACCGGCGTTGAACTGCGCACCACCTCCGGGAGCTCTTTTAACA
JMSF039D06+           GTTCCGAGAATGTGTTCACCGGCGTTGAACTGCGCACCACCTCCGGGAGCTCTTTTAACA
JMSF015J05+           GTTCCGAGAATGTGTTCACCGGCGTTGAACTGCGCACCACCTCCGGGAGCTCTTTTAACA
                      ____________________________________________________________
consensus             GTTCCGAGAATGTGTTCACCGGCGTTGAACTGCGCACCACCTCCGGGAGCTCTTTTAACA
 
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JMSF051O22+           TCTACATCATGTGAAATTAGTGCCAGGTTGTAAACGAAGATAACGTACTTGAATTTCCAG
JMSF032D19+           TCTACATCATGTGAAATTAGTGCCAGGTTGTAAACGAAGATAACGTACTTGAATTTCCAG
JMSF014M03+           TCTACATCATGTGAAATTAGTGCCAGGTTGTAAACGAAGATAACGTACTTGAATTTCCAG
JMSF039D06+           TCTACATCATGTGAAATTAGTGCCAGGTTGTAAACGAAGATAACGTACTTGAATTTCCAG
JMSF015J05+           TCTACATCATGTGAAATTAGTGCCAGGTTGTAAACGAAGATAACGTACTTGAATTTCCAG
                      ____________________________________________________________
consensus             TCTACATCATGTGAAATTAGTGCCAGGTTGTAAACGAAGATAACGTACTTGAATTTCCAG
 
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JMSF051O22+           ATCTGTTGTTTTAAAGCACACAAAAAAATCCCCTCGCCATGAAGATTAACCTAGATTTAG
JMSF032D19+           ATCTGTTGTTTTAAAGCACACAAAAAAATCCCCTCGCCATGAAGATTAACCTAGATTTAG
JMSF014M03+           ATCTGTTGTTTTAAAGCACACAAAAAAATCCCCTCGCCATGAAGATTAACTTAGA     
JMSF039D06+           ATCTGTTGTTTTAAAGCACACAAAAAAATCCCCTCGCCATGAAGATTAACCTAGATTTAG
JMSF015J05+           ATCTGTTGTTTTAAAGCACACAAAAAAATCCCCTCGCCATGAAGATTAACCTAGATTTAG
                      ____________________________________________________________
consensus             ATCTGTTGTTTTAAAGCACACAAAAAAATCCCCTCGCCATGAAGATTAACCTAGATTTAG
 
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JMSF051O22+           GATATAAACAACAGCTCGGGTTTACCGTCGCGATTGCGTCTACAAAAAACCATATTTTAC
JMSF032D19+           GATATAAACAACAGCTCGGGTTTACCGTCGCGATTGCGTCTACAAAAAACCATATTTTAC
JMSF039D06+           GATATAAACAACAGCTCGGGTTTACCGTCGCGATTGCGTCTACAAAAAACCATATTTTAC
JMSF015J05+           GATATAAACAACAGCTCGGGTTTACCGTCGCGATTGCGTCTAC-AAAAACCATATTTTAC
                      ____________________________________________________________
consensus             GATATAAACAACAGCTCGGGTTTACCGTCGCGATTGCGTCTACAAAAAACCATATTTTAC
 
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JMSF051O22+           CTACCATTT---CAAAAACGGAAATTACAGACTTAGAAATTAGGGTAGAAGACCGCGATT
JMSF032D19+           CTACCATTTCACCAAAAACGGAAATTACAGACTTAGAAATTAGGGTAGAAGACCGCGATT
JMSF039D06+           CTACCATTTCACCAAAAACGGAAATTACAGACTTAGAAATTAGGGTAGAAGACCGCGATT
JMSF015J05+           CTACCATTTCACCAAAAACGGAAATTACAGACTTAGAAATTAGGGTAGAAGACCGCGATT
                      ____________________________________________________________
consensus             CTACCATTTCACCAAAAACGGAAATTACAGACTTAGAAATTAGGGTAGAAGACCGCGATT
 
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JMSF051O22+           CGGACAAGTCTAGAGAGAAAGGGAGAAGGGAAAAGAGAAGTCGAACATTCGGTAT     
JMSF032D19+           CGGACAAGTCTAGAGAGAAAGGGAGAAGGGAAAAGAGAAGTCGAACATTCGGTAT     
JMSF039D06+           CGGACAAGTCTAGAGAGAAAGGGAGAAGGGAAAAGAGAAGTCGAACATTCGGTAT     
JMSF015J05+           CGGACAAGTCTAGAGAGAAAGGGAGAAGGGAAAAGAGAAGTCGAACATTCGGTATCTGCC
                      ____________________________________________________________
consensus             CGGACAAGTCTAGAGAGAAAGGGAGAAGGGAAAAGAGAAGTCGAACATTCGGTATCTGCC