Contig 009262:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS035C05Sequence603009262 (5)emb|CDP21488.1|2e-78unnamed protein product [Coffea canephora]
JMFS102C05Sequence601009262 (5)emb|CDP21488.1|2e-74unnamed protein product [Coffea canephora]
JMFS103F01Sequence594009262 (5)emb|CDP21488.1|2e-70unnamed protein product [Coffea canephora]
JMFS151B11Sequence614009262 (5)emb|CDP21488.1|2e-78unnamed protein product [Coffea canephora]
JMSF014J18Sequence457009262 (5)emb|CDP21488.1|4e-51unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFS035C05+                                 GCACCACTGGCCGTGATAAACGAACCTTTCTCATACTT
JMFS151B11+                                 GCACCACTGGCCGTGATAAACGAACCTTTCTCATACTT
JMFS102C05+                                                     CGAACCTTTCTCATACTT
JMFS103F01+                                                                   ACTT
                      ____________________________________________________________
consensus                                   GCACCACTGGCCGTGATAAACGAACCTTTCTCATACTT
 
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JMFS035C05+           CAACGCTTGCTCATAAAGCTCAGCAGGAGAAAGATTGTAGAGAATATGGGTAAACTTGAG
JMFS151B11+           CAACGCTTGCTCATAAAGCTCAGCAGGAGAAAGATTGTAGAGAATATGGGTAAACTTGAG
JMFS102C05+           CAACGCTTGCTCATAAAGCTCAGCAGGAGAAAGATTGTAGAGAATATGGGTAAACTTGAG
JMFS103F01+           CAACGCTTGCTCATAAAGCTCAGCAGGAGAAAGATTGTAGAGAATATGGGTAAACTTGAG
                      ____________________________________________________________
consensus             CAACGCTTGCTCATAAAGCTCAGCAGGAGAAAGATTGTAGAGAATATGGGTAAACTTGAG
 
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JMFS035C05+           GGAACTGTCACTGATGTTGAGCGTCGGCGCGTGATGGTGGTGACTCACGTGCGAGTCATG
JMFS151B11+           GGAACTGTCACTGATGTTGAGCGTCGGCGCGTGATGATGGTGACTCACGTGCGAGTCATG
JMFS102C05+           GGAACTGTCACTGATGTTGAGCGTCGGCGCGTGATGATGGTGACTCACGTGCGAGTCATG
JMFS103F01+           GGAACTGTCACTGATGTTGAGCGTCGGCGCGTGATGATGGTGACTCACGTGCGAGTCATG
                      ____________________________________________________________
consensus             GGAACTGTCACTGATGTTGAGCGTCGGCGCGTGATGATGGTGACTCACGTGCGAGTCATG
 
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JMFS035C05+           TGACACCCGCGGCGTCTCCGGCGTCGTCCTCGCCGGATCTCCCTTCACCACATTCGGCCC
JMFS151B11+           TGACACCCGCGGCGTCTCCGGCGTCGTCCTCGCCGGATCTCCCTTCACCACATTCGGCCC
JMFS102C05+           TGACACCCGCGGCGTCTCCGGCGTCGTCCTCGCCGGATCTCCCTTCACCACATTCGGCCC
JMFS103F01+           TGACACCCGCGGCGTCTCCGGCGTCGTCCTCGCCGGATCTCCCTTCACCACATTCGGCCC
JMSF014J18+                                  TCGTCCTCGCCGGATCTCCCTTCACCACATTCGGCCC
                      ____________________________________________________________
consensus             TGACACCCGCGGCGTCTCCGGCGTCGTCCTCGCCGGATCTCCCTTCACCACATTCGGCCC
 
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JMFS035C05+           AGTCTCCCTCGTCAGCGATGCCAACGAAGCACTGATGGAATGCAACTGTTGTTTCTGCCG
JMFS151B11+           AGTCTCCCTCGTCAGCGATGCCAACGAAGCACTGATGGAATGCAACTGTTGTTTCTGCCG
JMFS102C05+           AGTCTCCCTCGTCAGCGATGCCAACGAAGCACTGATGGAATGCAACTGTTGTTTCTGCCG
JMFS103F01+           AGTCTCCCTCGTCAGCGATGCCAACGAAGCACTGATGGAATGCAACTGTTGTTTCTGCCG
JMSF014J18+           AGTCTCCCTCGTCAGCGATGCCAACGAAGCACTGATGGAATGCAACTGTTGTTTCTGCCG
                      ____________________________________________________________
consensus             AGTCTCCCTCGTCAGCGATGCCAACGAAGCACTGATGGAATGCAACTGTTGTTTCTGCCG
 
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JMFS035C05+           CTCTTCCTCGGAGACGGCGGCGGCGAAGGCGGTCTGAGTTCCGGTGAGCGGGGTGGTAGG
JMFS151B11+           CTCTTCCTCGGAGACGGCGGCGGCGAAGGCGGTCTGAGTTCCGGTGAGCGGGGTGGTAGG
JMFS102C05+           CTCTTCCTCGGAGACGGCGGCGGCGAAGGCGGTCTGAGTTCCGGTGAGCGGGGTGGTAGG
JMFS103F01+           CTCTTCCTCGGAGACGGCGGCGGCGAAGGCGGTCTGAGTTCCGGTGAGCGGGGTGGTAGG
JMSF014J18+           CTCTTCCTCGGAGACGGCGGCGGCGAAGGCGGTCTGAGTTCCGGTGAGCGGGGTGGTAGG
                      ____________________________________________________________
consensus             CTCTTCCTCGGAGACGGCGGCGGCGAAGGCGGTCTGAGTTCCGGTGAGCGGGGTGGTAGG
 
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JMFS035C05+           GGCGGACTTCTTCTTCTGCAGCGAGTGCAACTCCTCCAGCGTCTTAGCATTCACCGGCTT
JMFS151B11+           GGCGGACTTCTTCTTCTGCAGCGAGTGCAACTCCTCCAGCGTCTTAGCATTCACCGGCTT
JMFS102C05+           GGCGGACTTCTTCTTCTGCAGCGAGTGCAACTCCTCCAGCGTCTTAGCATTCACCGGCTT
JMFS103F01+           GGCGGACTTCTTCTTCTGCAGCGAGTGCAACTCCTCCAGCGTCTTAGCATTCACCGGCTT
JMSF014J18+           GGCGGACTTCTTCTTCTGCAGCGAGTGCAACTCCTCCAGCGTCTTAGCATTCACCGGCTT
                      ____________________________________________________________
consensus             GGCGGACTTCTTCTTCTGCAGCGAGTGCAACTCCTCCAGCGTCTTAGCATTCACCGGCTT
 
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JMFS035C05+           CGCGCTGTCGTCGTGGCAGATCTCGTCCTCCTTCGTCGTCTTCTGCGTCTGGATTTTCGG
JMFS151B11+           CGCGCTGTCGTCGTGGCAGATCTCGTCCTCCTTCGTCGTCTTCTGCGTCTGGATTTTCGG
JMFS102C05+           CGCGCTGTCGTCGTGGCAGATCTCGTCCTCCTTCGTCGTCTTCTGCGTCTGGATTTTCGG
JMFS103F01+           CGCGCTGTCGTCGTGGCAGATCTCGTCCTCCTTCGTCGTCTTCTGCGTCTGGATTTTCGG
JMSF014J18+           CGCGCNGTCGTCGTGGCAGATCTCGTCCTCCTTCGTCGTCTTCTGCGTCTGGATTTTCGG
                      ____________________________________________________________
consensus             CGCGCTGTCGTCGTGGCAGATCTCGTCCTCCTTCGTCGTCTTCTGCGTCTGGATTTTCGG
 
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JMFS035C05+           CAGTCCATTCCGCCCTTTTCCGGCGGTGGAGAAGCTAAACTCTCCGTTGTTCGCCGCCGC
JMFS151B11+           CAGTCCATTCCGCCCTTTTCCGGCGGTGGAGAAGCTAAACTCTCCGTTGTTCGCCGCCGC
JMFS102C05+           CAGTCCATTCCGCCCTTTTCCGGCGGTGGAGAAGCTAAACTCTCCGTTGTTCGCCGCCGC
JMFS103F01+           CAGTCCATTCCGCCCTTTTCCGGCGGTGGAGAAGCTAAACTCTCCGTTGTTCGCCGCCGC
JMSF014J18+           CAGTCCATTCCGCCCTTTTCCGGCGGTGGAGAAGCTAAACTCTCCGTTGTTCGCCGCCGC
                      ____________________________________________________________
consensus             CAGTCCATTCCGCCCTTTTCCGGCGGTGGAGAAGCTAAACTCTCCGTTGTTCGCCGCCGC
 
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JMFS035C05+           CATTATTTCTCCCAGAAAGGAAGGGGATATGATGAAGAAGGTGAAGAGTGGAAGATGGAA
JMFS151B11+           CATTATTTCTCCCAGAAAGGAAGGGGATATGATGAAGAAGGTGAAGAGTGGAAGATGGAA
JMFS102C05+           CATTATTTCTCCCAGAAAGGAAGGGGATATGATGAAGAAGGTGAAGAGTGGAAGATGGAA
JMFS103F01+           CATTATTTCTCCCAGAAAGGAAGGGGATATGATGAAGAAGGTGAAGAGTGGAAGATGGAA
JMSF014J18+           CATTATTTCTCCCAGAAAGGAAGGGGATATGATGAAGAAGGTGAAGAGTGGAAGATGGAA
                      ____________________________________________________________
consensus             CATTATTTCTCCCAGAAAGGAAGGGGATATGATGAAGAAGGTGAAGAGTGGAAGATGGAA
 
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JMFS035C05+           TTACGGAACGAAACGGAACGGGATG                                   
JMFS151B11+           TTACGGAACGAAACGGAACGGGATGGTCCAACCATA                        
JMFS102C05+           TTACGGAACGAAACGGAACGGGATGGTCCAACCATA                        
JMFS103F01+           TTACGGAACGAAACGGAACGGGATGGTCCAACCATACACAGTA                 
JMSF014J18+           TTACGGAACGAAACGGAACGGGATGGTCCAACCATACACAGTATAATAATGGAAGGTTTA
                      ____________________________________________________________
consensus             TTACGGAACGAAACGGAACGGGATGGTCCAACCATACACAGTATAATAATGGAAGGTTTA