Contig 009258:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF004H19Sequence355009258 (2)ref|XP_009774612.1|1e-38PREDICTED: transmembrane protein 33 homolog [Nicotiana sylvestris]
JMSF013M13Sequence270009258 (2)ref|XP_011085554.1|5e-22PREDICTED: transmembrane protein 33 homolog [Sesamum indicum]656001312 (2)ref|XP_009774612.1|7e-60PREDICTED: transmembrane protein 33 homolog [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF004H19+           CTGAGAAGATCTGCTAGGTGCCATTGGCTCAACCACCAGATCTGGATCAATGTGTCGCTG
                      ____________________________________________________________
consensus             CTGAGAAGATCTGCTAGGTGCCATTGGCTCAACCACCAGATCTGGATCAATGTGTCGCTG
 
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JMSF004H19+           GTAGAACTTGCGCTTATAGTGGTCGACGACGTCGGAGCGGGAGGCCATGTGTGGTGGGAT
JMSF013M13+                                         GTCGGAGCGGGAGGCCATGTGTGGTGGGAT
                      ____________________________________________________________
consensus             GTAGAACTTGCGCTTATAGTGGTCGACGACGTCGGAGCGGGAGGCCATGTGTGGTGGGAT
 
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JMSF004H19+           GAGAATATTGGACCAGTAATCGGCCCATTTGGGATCGTTCTCGTAGTCGTACGCCGCCGC
JMSF013M13+           GAGAATATTGGACCAGTAATCGGCCCATTTGGGATCGTTCTCGTAGTCGTACGCCGCCGC
                      ____________________________________________________________
consensus             GAGAATATTGGACCAGTAATCGGCCCATTTGGGATCGTTCTCGTAGTCGTACGCCGCCGC
 
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JMSF004H19+           CGCTATCCTCTTCAGCTTCTGCGGATCCTCTCCTCCTCCTCCCATGTCCGCCGTTGACCT
JMSF013M13+           CGCTATCCTCTTCAGCTTCTGCGGATCCTCTCCTCCTCCTCCCATGTCCGCCGTTGACCT
                      ____________________________________________________________
consensus             CGCTATCCTCTTCAGCTTCTGCGGATCCTCTCCTCCTCCTCCCATGTCCGCCGTTGACCT
 
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JMSF004H19+           TGAGTTCTGAGTCTTTTTACGGTCTACGATCGCTCGCTAGAGGGCGGAGATGTCCAGGAC
JMSF013M13+           TGAGTTCTGAGTCTTTTTACGGTCTACGATCGCTCGCTAGAGGGCGGAGATGTCCAGGAC
                      ____________________________________________________________
consensus             TGAGTTCTGAGTCTTTTTACGGTCTACGATCGCTCGCTAGAGGGCGGAGATGTCCAGGAC
 
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JMSF004H19+           TCGAAGTAGTTTCTTCCAACCACAATTCTTTCTTCTTCTCGACTGCTATCAGTC      
JMSF013M13+           TCGAAGTAGTTTCTTCCAACCACAATTCTTTCTTCTTCTCGACTGCTATCAGTCGCGCTC
                      ____________________________________________________________
consensus             TCGAAGTAGTTTCTTCCAACCACAATTCTTTCTTCTTCTCGACTGCTATCAGTCGCGCTC