Contig 009258:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF004H19Sequence355009258 (2)ref|XP_009774612.1|1e-38PREDICTED: transmembrane protein 33 homolog [Nicotiana sylvestris]
JMSF013M13Sequence270009258 (2)ref|XP_011085554.1|5e-22PREDICTED: transmembrane protein 33 homolog [Sesamum indicum]656001312 (2)ref|XP_009774612.1|7e-60PREDICTED: transmembrane protein 33 homolog [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF004H19+ CTGAGAAGATCTGCTAGGTGCCATTGGCTCAACCACCAGATCTGGATCAATGTGTCGCTG
                      ____________________________________________________________
consensus CTGAGAAGATCTGCTAGGTGCCATTGGCTCAACCACCAGATCTGGATCAATGTGTCGCTG
 
. : . : . : . : . : . :
JMSF004H19+ GTAGAACTTGCGCTTATAGTGGTCGACGACGTCGGAGCGGGAGGCCATGTGTGGTGGGAT
JMSF013M13+ GTCGGAGCGGGAGGCCATGTGTGGTGGGAT
                      ____________________________________________________________
consensus GTAGAACTTGCGCTTATAGTGGTCGACGACGTCGGAGCGGGAGGCCATGTGTGGTGGGAT
 
. : . : . : . : . : . :
JMSF004H19+ GAGAATATTGGACCAGTAATCGGCCCATTTGGGATCGTTCTCGTAGTCGTACGCCGCCGC
JMSF013M13+ GAGAATATTGGACCAGTAATCGGCCCATTTGGGATCGTTCTCGTAGTCGTACGCCGCCGC
                      ____________________________________________________________
consensus GAGAATATTGGACCAGTAATCGGCCCATTTGGGATCGTTCTCGTAGTCGTACGCCGCCGC
 
. : . : . : . : . : . :
JMSF004H19+ CGCTATCCTCTTCAGCTTCTGCGGATCCTCTCCTCCTCCTCCCATGTCCGCCGTTGACCT
JMSF013M13+ CGCTATCCTCTTCAGCTTCTGCGGATCCTCTCCTCCTCCTCCCATGTCCGCCGTTGACCT
                      ____________________________________________________________
consensus CGCTATCCTCTTCAGCTTCTGCGGATCCTCTCCTCCTCCTCCCATGTCCGCCGTTGACCT
 
. : . : . : . : . : . :
JMSF004H19+ TGAGTTCTGAGTCTTTTTACGGTCTACGATCGCTCGCTAGAGGGCGGAGATGTCCAGGAC
JMSF013M13+ TGAGTTCTGAGTCTTTTTACGGTCTACGATCGCTCGCTAGAGGGCGGAGATGTCCAGGAC
                      ____________________________________________________________
consensus TGAGTTCTGAGTCTTTTTACGGTCTACGATCGCTCGCTAGAGGGCGGAGATGTCCAGGAC
 
. : . : . : . : . : . :
JMSF004H19+ TCGAAGTAGTTTCTTCCAACCACAATTCTTTCTTCTTCTCGACTGCTATCAGTC
JMSF013M13+ TCGAAGTAGTTTCTTCCAACCACAATTCTTTCTTCTTCTCGACTGCTATCAGTCGCGCTC
                      ____________________________________________________________
consensus TCGAAGTAGTTTCTTCCAACCACAATTCTTTCTTCTTCTCGACTGCTATCAGTCGCGCTC