Contig 009256:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS093G03Sequence316009256 (2)ref|XP_006339852.1|4e-06PREDICTED: F-box protein SKIP2-like [Solanum tuberosum]
JMSF013J13Sequence552009256 (2)ref|XP_006339852.1|3e-23PREDICTED: F-box protein SKIP2-like [Solanum tuberosum]741022484ref|XP_009619626.1|8e-66PREDICTED: F-box protein At1g47056-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF013J13+ ACGAGGAGCCAC
                      ____________________________________________________________
consensus ACGAGGAGCCAC
 
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JMSF013J13+ TTCCGGCAGACGAGGGAGCAGCTTTTCCGGTCACCGGAGCTCAAGGATTGAAAAATCAGC
                      ____________________________________________________________
consensus TTCCGGCAGACGAGGGAGCAGCTTTTCCGGTCACCGGAGCTCAAGGATTGAAAAATCAGC
 
. : . : . : . : . : . :
JMFS093G03+ GCACCCTCCGAAACCGTCCTCCGAA
JMSF013J13+ GCTAAGCATTCGTCAGGAACCCCGTCGCTGTAATCGCACCCTCCGAAACCGTCCTCCGAA
                      ____________________________________________________________
consensus GCTAAGCATTCGTCAGGAACCCCGTCGCTGTAATCGCACCCTCCGAAACCGTCCTCCGAA
 
. : . : . : . : . : . :
JMFS093G03+ CTTGGCGCGGCGTCTTCATCCGACTGCACCATCGACAAAACATCCTGCTGTGAATGATCA
JMSF013J13+ CTTGGCGCGGCGTCTTCATCCGACTGCACCATCGACAAAACATCCTGCTGTGAATGATCA
                      ____________________________________________________________
consensus CTTGGCGCGGCGTCTTCATCCGACTGCACCATCGACAAAACATCCTGCTGTGAATGATCA
 
. : . : . : . : . : . :
JMFS093G03+ GACATTGATCGGCGATGTTTAGCAACAGGCTTCGGATAACAACTACGGGTACGGTGAGTA
JMSF013J13+ GACATTGATCGGCGATGTTTAGCAACAGGCTTCGGATAACAACTACGGTTACGGTGAGTA
                      ____________________________________________________________
consensus GACATTGATCGGCGATGTTTAGCAACAGGCTTCGGATAACAACTACGGTTACGGTGAGTA
 
. : . : . : . : . : . :
JMFS093G03+ GACCCACCAGGCCAGGATTGGTGGATCGACGGAGACTGGCCCATCCAGATTCGGCGATAT
JMSF013J13+ GACCCACCAGGCCAGGATTGGTGGATCGACGGAGACTGGCCCATCCAGATTCGGCGATAT
                      ____________________________________________________________
consensus GACCCACCAGGCCAGGATTGGTGGATCGACGGAGACTGGCCCATCCAGATTCGGCGATAT
 
. : . : . : . : . : . :
JMFS093G03+ AAGACACGAGGCCGATTCACGGCAAGCGCAATTCACGCGCCGCCCTAGATTCAACGCAGA
JMSF013J13+ AAGACACGAGGCCGATTCACGGCAAGCGCAATTCACGCGCCGCCCTAGATTCAACGCAGA
                      ____________________________________________________________
consensus AAGACACGAGGCCGATTCACGGCAAGCGCAATTCACGCGCCGCCCTAGATTCAACGCAGA
 
. : . : . : . : . : . :
JMFS093G03+ ATCGGGTGGTGTGCAGATTAGATTTGGGGATGAAAAAAAAACAAACAAACA
JMSF013J13+ ATCGGGTGGTGTACAGATTAGATTTGGGGATGAAAAAAAAACAAACAAACAAACGAGCGA
                      ____________________________________________________________
consensus ATCGGGTGGTGTGCAGATTAGATTTGGGGATGAAAAAAAAACAAACAAACAAACGAGCGA
 
. : . : . : . : . : . :
JMSF013J13+ TCGATGAATCTTTTGAGCAATTGGGGCAAATTGGCAAAGTTTTAATAGGAAGGAGGGTTT
                      ____________________________________________________________
consensus TCGATGAATCTTTTGAGCAATTGGGGCAAATTGGCAAAGTTTTAATAGGAAGGAGGGTTT
 
. : . : . : . : . : . :
JMSF013J13+ GACATTTGACCCGTCAAAACCAGATTGGACCGCCAAAGGGGCAACACCAATTTGTGCGCC
                      ____________________________________________________________
consensus GACATTTGACCCGTCAAAACCAGATTGGACCGCCAAAGGGGCAACACCAATTTGTGCGCC