| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF015E24 | Sequence | 549 | 009253 (5) | ref|XP_004231043.1| | 7e-84 | PREDICTED: WD-40 repeat-containing protein MSI2-like [Solanum lycopersicum] | 530 | 002558 (3) | ref|XP_009791634.1| | 2e-57 | PREDICTED: WD-40 repeat-containing protein MSI2-like [Nicotiana sylvestris] |
| JMFF022L13 | Sequence | 505 | 009253 (5) | ref|XP_004231043.1| | 1e-63 | PREDICTED: WD-40 repeat-containing protein MSI2-like [Solanum lycopersicum] | |||||
| JMFF051P11 | Sequence | 631 | 009253 (5) | ref|XP_004231043.1| | 1e-85 | PREDICTED: WD-40 repeat-containing protein MSI2-like [Solanum lycopersicum] | 594 | 004716 (4) | ref|XP_007026646.1| | 2e-21 | Metallopeptidase M24 family protein isoform 1 [Theobroma cacao] gb|EOY07148.1| M |
| JMSF013G17 | Sequence | 446 | 009253 (5) | ref|XP_004231043.1| | 6e-48 | PREDICTED: WD-40 repeat-containing protein MSI2-like [Solanum lycopersicum] | 473 | 002558 (3) | ref|XP_009791634.1| | 2e-32 | PREDICTED: WD-40 repeat-containing protein MSI2-like [Nicotiana sylvestris] |
| JMSF013H03 | Sequence | 293 | 009253 (5) | ref|XP_004231043.1| | 4e-18 | PREDICTED: WD-40 repeat-containing protein MSI2-like [Solanum lycopersicum] | 690 | 002558 (3) | ref|XP_009791634.1| | 1e-101 | PREDICTED: WD-40 repeat-containing protein MSI2-like [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMFF015E24+ AATGGGCTCCATGACAAGCCATACCCT
JMFF051P11+ ACTCAAAAGACTCCCCTCTCTGAATGGGCTCCATGACAAGCCATACCCT
____________________________________________________________
consensus ACTCAAAAGACTCCCCTCTCTGAATGGGCTCCATGACAAGCCATACCCT
. : . : . : . : . : . :
JMFF015E24+ TCTTTATCATGACCTCTCAGTCTTAAGTAAGGGTCACAAGATCCCCCTTCATCATGATTC
JMFF051P11+ TCTTATCNATGACCTCTCAGTCTTAAGTAAGGGTCACAAGATCCCCCTTCATCATGATTC
____________________________________________________________
consensus TCTTTTTCATGACCTCTCAGTCTTAAGTAAGGGTCACAAGATCCCCCTTCATCATGATTC
. : . : . : . : . : . :
JMFF015E24+ AAATGCTGGTTGGCACTGTCAAACACGTAAACTTCACAGCCATTAGTTTTAGCTGCAACA
JMFF051P11+ AAATGCTGGTTGGCACTGTCAAACACGTAAACTTCACAGCCATTAGTTTTAGCTGCAACA
JMFF022L13+ GTCAAACACGTAAACTTCACAGCCATTAGTTTTAGCTGCAACA
____________________________________________________________
consensus AAATGCTGGTTGGCACTGTCAAACACGTAAACTTCACAGCCATTAGTTTTAGCTGCAACA
. : . : . : . : . : . :
JMFF015E24+ ACACCTGTGTTCTGCGGCATACATCTTGCCCTATTCACTTCCCCATCACAGAGTATCTTT
JMFF051P11+ ACACCTGTGTTCTGCGGCATACATCTTGCCCTATTCACTTCCCCATCACAGAGTATCTTT
JMFF022L13+ ACACCTGTGTTCTGCGGCATACATCTTGCCCTATTCACTTCCCCATCACAGAGTATCTTT
JMSF013G17+ TCACTTCCCCATCACAGAGTATCTTT
____________________________________________________________
consensus ACACCTGTGTTCTGCGGCATACATCTTGCCCTATTCACTTCCCCATCACAGAGTATCTTT
. : . : . : . : . : . :
JMFF015E24+ TGTACTATCTCAACCTTGGGGGTTTGAAATTCACTGAGATTGTGCTCTAGGCCAGAGGCA
JMFF051P11+ TGTACTATCTCAACCTTGGGGGTTTGAAATTCACTGAGATTGTGCTCTAGGCCAGAGGCA
JMFF022L13+ TGTACTATCTCAACCTTGGGGGTTTGAAATTCACTGAGATTGTGCTCTAGGCCAGAGGCA
JMSF013G17+ TGTACTATCTCAACCTTGGGGGTTTGAAATTCACTGAGATTGTGCTCTAGGCCAGAGGCA
____________________________________________________________
consensus TGTACTATCTCAACCTTGGGGGTTTGAAATTCACTGAGATTGTGCTCTAGGCCAGAGGCA
. : . : . : . : . : . :
JMFF015E24+ GGGTTCCGAGGAAGGTAGGCCTGAGCGAGCATAAGGAAGTTGGGACAGTCGTCAGAGGTA
JMFF051P11+ GGGTTCCGAGGAAGGTAGGCCTGAGCGAGCATAAGGAAGTTGGGACAGTCGTCAGAGGTA
JMFF022L13+ GGGTTCCGAGGAAGGTAGGCCTGAGCGAGCATAAGGAAGTTGGGACAGTCGTCAGAGGTA
JMSF013G17+ GGGTTCCGAGGAAGGTAGGCCTGAGCGAGCATAAGGAAGTTGGGACAGTCGTCAGAGGTA
____________________________________________________________
consensus GGGTTCCGAGGAAGGTAGGCCTGAGCGAGCATAAGGAAGTTGGGACAGTCGTCAGAGGTA
. : . : . : . : . : . :
JMFF015E24+ TGGGTTCCCAGAAGGAGCTTGTGTACAGAGAAAGGACCGTCATGAGATGGAGGAGAAGGA
JMFF051P11+ TGGGTTCCCAGAAGGAGCTTGTGTACAGAGAAAGGACCGTCATGAGATGGAGGAGAAGGA
JMFF022L13+ TGGGTTCCCAGAAGGAGCTTGTGTACAGAGAAAGGACCGTCATGAGATGGAGGAGAAGGA
JMSF013H03+ CCAGAAGGAGCTTGTGTACAGAGAAAGGACCGTCATGAGATGGAGGAGAAGGA
JMSF013G17+ TGGGTTCCCAGAAGGAGCTTGTGTACAGAGAAAGGACCGTCATGAGATGGAGGAGAAGGA
____________________________________________________________
consensus TGGGTTCCCAGAAGGAGCTTGTGTACAGAGAAAGGACCGTCATGAGATGGAGGAGAAGGA
. : . : . : . : . : . :
JMFF015E24+ AGGCACTGAACGGTGAGAGAAGGCCACTCGAGGGAATGAGAGATGACGAGGTCGTACAAC
JMFF051P11+ AGGCACTGAACGGTGAGAGAAGGCCACTCGAGGGAATGAGAGATGACGAGGTCGTACAAC
JMFF022L13+ AGGCACTGAACGGTGAGAGAAGGCCACTCGAGGGAATGAGAGATGACGAGGTCGTACAAC
JMSF013H03+ AGGCACTGAACGGTGAGAGAAGGCCACTCGAGGGAATGAGAGATGACGAGGTCGTACAAC
JMSF013G17+ AGGCACTGAACGGTGAGAGAAGGCCACTCGAGGGAATGAGAGATGACGAGGTCGTACAAC
____________________________________________________________
consensus AGGCACTGAACGGTGAGAGAAGGCCACTCGAGGGAATGAGAGATGACGAGGTCGTACAAC
. : . : . : . : . : . :
JMFF015E24+ AACGGCGTGTTCTTCTTCCACACCGCGAACTCCTCATCCACTCCTTCGCCTCCGGCGGTC
JMFF051P11+ AACGGCGTGTTCTTCTTCCACACCGCGAACTCCTCATCCACTCCTTCGCCTCCGGCGGTC
JMFF022L13+ AACGGCGTGTTCTTCTTCCACACCGCGAACTCCTCATCCACTCCTTCGCCTCCGGCGGTC
JMSF013H03+ AACGGCGTGTTCTTCTTCCACACCGCGAACTCCTCATCCACTCCTTCGCCTCCGGCGGTC
JMSF013G17+ AACGGCGTGTTCTTCTTCCACACCGCGAACTCCTCATCCACTCCTTCGCCTCCGGCGGTC
____________________________________________________________
consensus AACGGCGTGTTCTTCTTCCACACCGCGAACTCCTCATCCACTCCTTCGCCTCCGGCGGTC
. : . : . : . : . : . :
JMFF015E24+ GCCTCCATTTCTCTCTCTACCATTCTCTCCCAGTCAAGAACT
JMFF051P11+ GCCTCCATTTCTCTCTCTACCATTCTCTCCCAGTCAAGAACTGTGAACCAAGTCGCGGTG
JMFF022L13+ GCCTCCATTTCTCTCTCTACCATTCTCTCCCAGTCAAGAACTGTGAACCAAGTCGCGGTG
JMSF013H03+ GCCTCCATTTCTCTCTCTACCATTCTCTCCCAGTCAAGAACTGTGAACCAAGTCGCGGTG
JMSF013G17+ GCCTCCATTTCTCTCTCTACCATTCTCTCCCAGTCAAGAACTGTGAACCAAGTCGCGGTG
____________________________________________________________
consensus GCCTCCATTTCTCTCTCTACCATTCTCTCCCAGTCAAGAACTGTGAACCAAGTCGCGGTG
. : . : . : . : . : . :
JMFF051P11+ GAGGGTATACGAAAGAAAACGCAGCGGCTG
JMFF022L13+ GAGGGTATACGAAAGAAAACGCAGCGGCTG
JMSF013H03+ GAGGGTATACGAAAGAAAACGCAGCGGCTGCGCGGATTCAGGATTCTGTTTTCCCCGCCC
JMSF013G17+ GAGGGTATACGAAAGAAAACGCAGCGGCTGCGCGGATTCAGGATTCTGTTTTCCCCGCCC
____________________________________________________________
consensus GAGGGTATACGAAAGAAAACGCAGCGGCTGCGCGGATTCAGGATTCTGTTTTCCCCGCCC