Contig 009249:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF012O22Sequence348009249 (3)768008637 (3)ref|XP_008224858.1|2e-106PREDICTED: cysteine-rich receptor-like protein kinase 10, partial [Prunus mume]
JMSF044N23Sequence684009249 (3)ref|XP_006590217.1|1e-20PREDICTED: cysteine-rich receptor-like protein kinase 25-like [Glycine max]704008637 (3)ref|XP_008224858.1|3e-92PREDICTED: cysteine-rich receptor-like protein kinase 10, partial [Prunus mume]
JMSF051E02Sequence651009249 (3)ref|XP_006590217.1|2e-14PREDICTED: cysteine-rich receptor-like protein kinase 25-like [Glycine max]742008637 (3)ref|XP_008224858.1|7e-99PREDICTED: cysteine-rich receptor-like protein kinase 10, partial [Prunus mume]

Alignment

This contig is upended


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JMSF044N23+                                               CTCCTGGATAGCCTTTTTATAGCT
                      ____________________________________________________________
consensus                                                 CTCCTGGATAGCCTTTTTATAGCT
 
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JMSF051E02+                    CCGCTGGGAAGCATTCCCTTATATACAGAACCATATCCACCTTCACCAATC
JMSF044N23+           ATTTCTTGTCCGCTGGGAAGCATTCCCTTATATACAGAACCATATCCACCTTCACCAATC
                      ____________________________________________________________
consensus             ATTTCTTGTCCGCTGGGAAGCATTCCCTTATATACAGAACCATATCCACCTTCACCAATC
 
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JMSF051E02+           TTATTGTCAGGAGAGAACACATTGGTAATAAGTTGAATAGTAGCAAAATCATATTGCAAG
JMSF044N23+           TTATTGTCAGGAGAGAACACATTGGTAATAAGTTGAATAGTAGCAAAATCATATTGCAAG
                      ____________________________________________________________
consensus             TTATTGTCAGGAGAGAACACATTGGTAATAAGTTGAATAGTAGCAAAATCATATTGCAAG
 
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JMSF051E02+           GACTCCTCATTTGAAATCTCCCCAGTCACATCTGTTGTCTGTAGTTTAGTATTTTGTTTC
JMSF044N23+           GACTCCTCATTTGAAATCTCCCCAGTCACATCTGTTGTCTGTAGTTTAGTATTTTGTTTC
                      ____________________________________________________________
consensus             GACTCCTCATTTGAAATCTCCCCAGTCACATCTGTTGTCTGTAGTTTAGTATTTTGTTTC
 
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JMSF051E02+           TTAGAATTTCTAATTCTCAGAAAATAAAGGACTGCAATGAAGAGTAGTATAGTAATCCCA
JMSF044N23+           TTAGAATTTCTAATTCTCAGAAAATAAAGGACTGCAATGAAGAGTAGTATAGTAATCCCA
                      ____________________________________________________________
consensus             TTAGAATTTCTAATTCTCAGAAAATAAAGGACTGCAATGAAGAGTAGTATAGTAATCCCA
 
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JMSF051E02+           ATGACTGGAACTACAACGGCAATAATCACTTTTGCAGAAGAACTTCCATGGCTTCCTGGA
JMSF044N23+           ATGACTGGAACTACAACGGCAATAATCACTTTTGCAGAAGAACTTCCATGGCTTCCTGGA
                      ____________________________________________________________
consensus             ATGACTGGAACTACAACGGCAATAATCACTTTTGCAGAAGAACTTCCATGGCTTCCTGGA
 
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JMSF051E02+           GGAGCCGAAAGCGAATAATCAGCAGAAAAAGTTGATGAATGAACATGAATATCCGCCGGA
JMSF044N23+           GGAGCCGAAAGCGAATAATCAGCAGAAAAAGTTGATGAATGAACATGAATATCCGCCGGA
JMSF012O22+                       GAATATTCANCAGAAAAAGTTGATGAATGAACATGAATATCCGCCGGA
                      ____________________________________________________________
consensus             GGAGCCGAAAGCGAATAATCAGCAGAAAAAGTTGATGAATGAACATGAATATCCGCCGGA
 
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JMSF051E02+           CTGATAGTTGGTGGAGCCTCAGGCGAATAAACAGAAGAATAAGTTGGTGAAGGAGCAGGA
JMSF044N23+           CTGATAGTTGGTGGAGCCTCAGGCGAATAAACAGAAGAATAAGTTGGTGAAGGAGCAGGA
JMSF012O22+           CTGATAGTTGGTGGAGCNTCAGGCGAATAAACAGAAGAATAAGTTGGTGAAGGAGCAGGA
                      ____________________________________________________________
consensus             CTGATAGTTGGTGGAGCCTCAGGCGAATAAACAGAAGAATAAGTTGGTGAAGGAGCAGGA
 
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JMSF051E02+           ATATCAGCAGAACGGATAGTTGGTGGAGCCGGAGGAGAATAAACCGAGCTGTAAGTTGGT
JMSF044N23+           ATATCAGCAGAACGGATAGTTGGTGGAGCCGGAGGAGAATAAACCGAGCTGTAAGTTGGT
JMSF012O22+           ATATCAGCAGAACGGATAGTTGGTGGAGCCGGAGGAGAATAAACCGAGCTGTAAGTTGGT
                      ____________________________________________________________
consensus             ATATCAGCAGAACGGATAGTTGGTGGAGCCGGAGGAGAATAAACCGAGCTGTAAGTTGGT
 
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JMSF051E02+           GAAGCAGCTGGAGAAGAAAAAGGAGGATAAGAATAGCGACCAAGGAGCTCACGATGAGAA
JMSF044N23+           GAAGCAGCTGGAGAAGAAAAAGGAGGATAAGAATAGCGACCAAGGAGCTCACGATGAGAA
JMSF012O22+           GAAGCAGCTGGAGAAGAAAAAGGAGGATAAGAATAGCGACCAAGGAGCTCACGATGAGAA
                      ____________________________________________________________
consensus             GAAGCAGCTGGAGAAGAAAAAGGAGGATAAGAATAGCGACCAAGGAGCTCACGATGAGAA
 
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JMSF051E02+           GAAATAGAAGAGATAGTGGGTGGAGCAGGAGGAGAAGAAATAGGAGTGATAGTTGGTGGA
JMSF044N23+           GAAATAGAAGAGATAGTGGGTGGAGCAGGAGGAGAAGAAATAGGAGTGATAGTTGGTGGA
JMSF012O22+           GAAATAGAAGAGATAGTGGGTGGAGCAGGAGGAGAAGAAATAGGAGTGATAGTTGGTGGA
                      ____________________________________________________________
consensus             GAAATAGAAGAGATAGTGGGTGGAGCAGGAGGAGAAGAAATAGGAGTGATAGTTGGTGGA
 
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JMSF051E02+           GAGGGAGGAGAAGAAGAAGAAGTAAGACTGATAGTAGCCATTACCGGAGAGATTGCTCCC
JMSF044N23+           GAGGGAGGAGAAGAAGAAGAAGTAAGACTGATAGTAGCCATTACCGGAGAGATTGCTCCC
JMSF012O22+           GAGGGAGGAGAAGAAGAAGAAGTAAGACTGATAGTAGCCATTACCGGAGAGATTGCTCCC
                      ____________________________________________________________
consensus             GAGGGAGGAGAAGAAGAAGAAGTAAGACTGATAGTAGCCATTACCGGAGAGATTGCTCCC