Contig 009248:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF030E22Sequence590009248 (3)gb|AHA06001.1|8e-101jasmonate O-methyltransferase [Ipomoea nil]733006998 (3)gb|AHA06001.1|7e-125jasmonate O-methyltransferase [Ipomoea nil]
JMFF050D15Sequence585009248 (3)gb|AHA06001.1|7e-101jasmonate O-methyltransferase [Ipomoea nil]580006998 (3)gb|AHA06001.1|2e-78jasmonate O-methyltransferase [Ipomoea nil]
JMSF012L04Sequence468009248 (3)gb|AHA06001.1|2e-81jasmonate O-methyltransferase [Ipomoea nil]741006998 (3)gb|AHA06001.1|8e-126jasmonate O-methyltransferase [Ipomoea nil]

Alignment

This contig is upended


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JMFF050D15+                    AACCTGAGAGAGCCAATGGAGGCTGGAAGAAGAGTGAATGAAGTGCAGACT
JMFF030E22+                    AACCTGAGAGAGCCAATGGAGGCTGGAAGAAGAGTGAATGAAGTGCAGACT
                      ____________________________________________________________
consensus                      AACCTGAGAGAGCCAATGGAGGCTGGAAGAAGAGTGAATGAAGTGCAGACT
 
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JMFF050D15+           CTTCCTCGGAAACAACCTTCCATAGAAGGAACCTGGTACGCCTGTCACGAAACAATTTTC
JMFF030E22+           CTTCCTCGGAAACAACCTTCCATAGAAGGAACCTGGTACGCCTGTCACGAAACAATTTTC
                      ____________________________________________________________
consensus             CTTCCTCGGAAACAACCTTCCATAGAAGGAACCTGGTACGCCTGTCACGAAACAATTTTC
 
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JMFF050D15+           CATCTCCTTCCCCTTCTCTTCTTTCAGCCTCTTGTAAAACGCCGGCAACGACATGAATAT
JMFF030E22+           CATCTCCTTCCCCTTCTCTTCTTTCAGCCTCTTGTAAAACGCCGGCAACGACATGAATAT
JMSF012L04+                       CTTCTCTTCTTTCAGCCTCTTGTAAAACGCCGGCAACGACATGAATAT
                      ____________________________________________________________
consensus             CATCTCCTTCCCCTTCTCTTCTTTCAGCCTCTTGTAAAACGCCGGCAACGACATGAATAT
 
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JMFF050D15+           GTCGTTGAAGTCATTCCCCGGAAGGTCGTTGAGATAAACTCGTAGCTCCGGCAAGGGCCG
JMFF030E22+           GTCGTTGAAGTCATTCCCCGGAAGGTCGTTGAGATAAACTCGTAGCTCCGGCAAGGGCCG
JMSF012L04+           GTCGTTGAAGTCATTCCCCGGAAGGTCGTTGAGATAAACTCGTAGCTCCGGCAAGGGCCG
                      ____________________________________________________________
consensus             GTCGTTGAAGTCATTCCCCGGAAGGTCGTTGAGATAAACTCGTAGCTCCGGCAAGGGCCG
 
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JMFF050D15+           CCCGGTTTTCCTTGTTGAGTTGTAGATGATTCCGATGATCTTCGACACTACTGTTAAGGT
JMFF030E22+           CCCGGTTTTCCTTGTTGAGTTGTAGATGATTCCGATGATCTTCGACACTACTGTTAAGGT
JMSF012L04+           CCCGGTTTTCCTTGTTGAGTTGTAGATGATTCCGATGATCTTCGACACTACTGTTAAGGT
                      ____________________________________________________________
consensus             CCCGGTTTTCCTTGTTGAGTTGTAGATGATTCCGATGATCTTCGACACTACTGTTAAGGT
 
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JMFF050D15+           GTTGGGGCCAGAGGAACAGCCCAGGTCTGCAATGCCCATGCTTTCGGGGAAATTAATGTT
JMFF030E22+           GTTGGGGCCAGAGGAACAGCCCAGGTCTGCAATGCCCATGCTTTCGGGGAAATTAATGTT
JMSF012L04+           GTTGGGGCCAGAGGAACAGCCCAGGTCTGCAATGCCCATGCTTTCGGGGAAATTAATGTT
                      ____________________________________________________________
consensus             GTTGGGGCCAGAGGAACAGCCCAGGTCTGCAATGCCCATGCTTTCGGGGAAATTAATGTT
 
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JMFF050D15+           GTTGTCGTTGTACAAAATGCCGTTTAATGCTTCTTCAAGTAATGGGTTTCCCTCCAGCAT
JMFF030E22+           GTTGTCGTTGTACAAAATGCCGTTTAATGCTTCTTCAAGTAATGGGTTTCCCTCCAGCAT
JMSF012L04+           GTTGTCGTTGTACAAAATGCCGTTTAATGCTTCTTCAAGTAATGGGTTTCCCTCCAGCAT
                      ____________________________________________________________
consensus             GTTGTCGTTGTACAAAATGCCGTTTAATGCTTCTTCAAGTAATGGGTTTCCCTCCAGCAT
 
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JMFF050D15+           AATCTTCATCTGCAAAGTAGAATTCTTGGCGTAACTAGTCTCTCCTTCTCCTTTGTTCAT
JMFF030E22+           AATCTTCATCTGCAAAGTAGAATTCTTGGCGTAACTAGTCTCTCCTTCTCCTTTGTTCAT
JMSF012L04+           AATCTTCATCTGCAAAGTAGAATTCTTGGCGTAACTAGTCTCTCCTTCTCCTTTGTTCAT
                      ____________________________________________________________
consensus             AATCTTCATCTGCAAAGTAGAATTCTTGGCGTAACTAGTCTCTCCTTCTCCTTTGTTCAT
 
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JMFF050D15+           GTGAAGAAATTGCAAGCATTCCATTGTGGATTTGTGTCTCTCTCTTCCTCTAACTCTCGC
JMFF030E22+           GTGAAGAAATTGCAAGCATTCCATTGTGGATTTGTGTCTCTCTCTTCCTCTAACTCTCGC
JMSF012L04+           GTGAAGAAATTGCAAGCATTCCATTGTGGATTTGTGTCTCTCTCTTCCTCTAACTCTCGC
                      ____________________________________________________________
consensus             GTGAAGAAATTGCAAGCATTCCATTGTGGATTTGTGTCTCTCTCTTCCTCTAACTCTCGC
 
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JMFF050D15+           TCTCTCTAAGGGTGTTTATATCCTTTAAAAGGATGGGACCTGCAGTGAATTGAA      
JMFF030E22+           TCTCTCTAAGGGTGTTTATATCCTTTAAAAGGATGGGACCTGCAGTGAATTGAA      
JMSF012L04+           TCTCTCTAAGGGTGTTTATATCCTTTAAAAGGATGGGACCTGCAGTGAATTGAAGAGATC
                      ____________________________________________________________
consensus             TCTCTCTAAGGGTGTTTATATCCTTTAAAAGGATGGGACCTGCAGTGAATTGAAGAGATC