Contig 009246:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF006F14Sequence415009246 (7)ref|XP_009785601.1|3e-10PREDICTED: K(+) efflux antiporter 6-like isoform X1 [Nicotiana sylvestris]
JMSF012H19Sequence287009246 (7)758009246 (7)ref|XP_009785605.1|1e-119PREDICTED: K(+) efflux antiporter 4-like isoform X4 [Nicotiana sylvestris]
JMSF019D14Sequence380009246 (7)735004251 (4)ref|XP_011097171.1|1e-23PREDICTED: K(+) efflux antiporter 6 [Sesamum indicum]
JMSF036O08Sequence656009246 (7)ref|XP_009785605.1|2e-52PREDICTED: K(+) efflux antiporter 4-like isoform X4 [Nicotiana sylvestris]673004251 (4)ref|XP_011097171.1|3e-24PREDICTED: K(+) efflux antiporter 6 [Sesamum indicum]
JMSF041A13Sequence693009246 (7)ref|XP_009785605.1|2e-61PREDICTED: K(+) efflux antiporter 4-like isoform X4 [Nicotiana sylvestris]558004251 (4)ref|XP_011097171.1|8e-19PREDICTED: K(+) efflux antiporter 6 [Sesamum indicum]
JMSF050J10Sequence641009246 (7)ref|XP_009785605.1|3e-47PREDICTED: K(+) efflux antiporter 4-like isoform X4 [Nicotiana sylvestris]727004251 (4)ref|XP_011097171.1|2e-25PREDICTED: K(+) efflux antiporter 6 [Sesamum indicum]

Alignment

This contig is upended


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rJMSF012H19-                                         TTATAATATGGAAATACATAAAAATTCCC
                      ____________________________________________________________
consensus                                            TTATAATATGGAAATACATAAAAATTCCC
 
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rJMSF012H19-          ATATTAGAGAAAGTCCTGAGAAAGGGTGTATTCTTAAAAAATGATGAGCCAACAAATTTT
                      ____________________________________________________________
consensus             ATATTAGAGAAAGTCCTGAGAAAGGGTGTATTCTTAAAAAATGATGAGCCAACAAATTTT
 
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rJMSF012H19-          TAAGAAAAAAATTACACAAGGGAAAAGAGTTTAAGATCTACCGAAGCTGTAATTCCAGAA
                      ____________________________________________________________
consensus             TAAGAAAAAAATTACACAAGGGAAAAGAGTTTAAGATCTACCGAAGCTGTAATTCCAGAA
 
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rJMSF012H19-          AGACACATAAACAGGAGAATCTGAATCAGGCCTCCAAGAACAGCTACTGCTCGAACAACT
                      ____________________________________________________________
consensus             AGACACATAAACAGGAGAATCTGAATCAGGCCTCCAAGAACAGCTACTGCTCGAACAACT
 
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rJMSF012H19-          CGGAGCTTTGTTGTGGAAAACTCCAGCCCCAAAGCAAAAAGAAGAAAAATCACACCAAAC
                      ____________________________________________________________
consensus             CGGAGCTTTGTTGTGGAAAACTCCAGCCCCAAAGCAAAAAGAAGAAAAATCACACCAAAC
 
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rJMSF012H19-          TGAGCAACAGTCTCTACTTGCACAATTTCACTAACAACATTAAACCCTCCAGGTCCAACA
                      ____________________________________________________________
consensus             TGAGCAACAGTCTCTACTTGCACAATTTCACTAACAACATTAAACCCTCCAGGTCCAACA
 
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rJMSF012H19-          ATGGATCCTGCTAGTAAGTATCCAGTTATAACTGGCTGTCCAGCACAAGCAAAAGCAATT
                      ____________________________________________________________
consensus             ATGGATCCTGCTAGTAAGTATCCAGTTATAACTGGCTGTCCAGCACAAGCAAAAGCAATT
 
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rJMSF012H19-          CCACCACAAGTTGCAGCAACAATGACAACTACCAGATCTGATATCAACCTCAAGTCCAAT
JMSF041A13+                  AAGTTGCAGCAACAATGACAACTACCAGATCTGATATCAACCTCAAGTCCAAT
JMSF036O08+                                                             CAAGTCCAAT
                      ____________________________________________________________
consensus             CCACCACAAGTTGCAGCAACAATGACAACTACCAGATCTGATATCAACCTCAAGTCCAAT
 
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rJMSF012H19-          TGTAGCACTGGATACTTTGACTTGAAACTAGATATGATAAAGACATTGTCCTTTCTATCA
JMSF041A13+           TGTAGCACTGGATACTTTGACTTGAAACTAGATATGATAAAGACATTGTCCTTTCTATCA
JMSF036O08+           TGTAGCACTGGATACTTTGACTTGAAACTAGATATGATAAAGACATTGTCCTTTCTATCA
JMSF050J10+                    GGATACTTTGACTTGAAACTAGATATGATAAAGACATTGTCCTTTCTATCA
                      ____________________________________________________________
consensus             TGTAGCACTGGATACTTTGACTTGAAACTAGATATGATAAAGACATTGTCCTTTCTATCA
 
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rJMSF012H19-          ATCAATGTTGGCGTCTCTTCTGCTCCATTGTCATTATCAAGGTTAAAGACATGGTGAAGT
JMSF041A13+           ATCAATGTTGGCGTCTCTTCTGCTCCATTGTCATTATCAAGGTTAAAGACATGGTGAAGT
JMSF036O08+           ATCAATGTTGGCGTCTCTTCTGCTCCATTGTCATTATCAAGGTTAAAGACATGGTGAAGT
JMSF050J10+           ATCAATGTTGGCGTCTCTTCTGCTCCATTGTCATTATCAAGGTTAAAGACATGGTGAAGT
                      ____________________________________________________________
consensus             ATCAATGTTGGCGTCTCTTCTGCTCCATTGTCATTATCAAGGTTAAAGACATGGTGAAGT
 
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rJMSF012H19-          TGAAAAGACTTTTCCTCCTTTTTGGTGTCATTTTTCTTGGACTTAACTCTAGCCACAGTC
JMSF041A13+           TGAAAAGACTTTTCCTCCTTTTTGGTGTCATTTTTCTTGGACTTAACTCTAGCCACAGTC
JMSF036O08+           TGAAAAGACTTTTCCTCCTTTTTGGTGTCATTTTTCTTGGACTTAACTCTAGCCACAGTC
JMSF050J10+           TGAAAAGACTTTTCCTCCTTTTTGGTGTCATTTTTCTTGGACTTAACTCTAGCCACAGTC
                      ____________________________________________________________
consensus             TGAAAAGACTTTTCCTCCTTTTTGGTGTCATTTTTCTTGGACTTAACTCTAGCCACAGTC
 
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rJMSF012H19-          TCCAACACTGCCTGCTGCTCTGAAACAGTATTATTGAAGCTGCCTGCATCATTAGCTTCG
JMSF041A13+           TCCAACACTGCCTGCTGCTCTGAAACAGTATTATTGAAGCTGCCTGCATCATTAGCTTCG
JMSF006F14+                                                      CTGCATCATTAGCTTCG
JMSF036O08+           TCCAACACTGCCTGCTGCTCTGAAACAGTATTATTGAAGCTGCCTGCATCATTAGCTTCG
JMSF050J10+           TCCAACACTGCCTGCTGCTCTGAAACAGTATTATTGAAGCTGCCTGCATCATTAGCTTCG
                      ____________________________________________________________
consensus             TCCAACACTGCCTGCTGCTCTGAAACAGTATTATTGAAGCTGCCTGCATCATTAGCTTCG
 
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rJMSF012H19-          TTCTGATCAGTCTCATTGAATTCCTTCTCGAGAGCTCGATCGATCATGTCAGCAANGCTA
JMSF041A13+           TTCTGATCAGTCTCATTGAATTCCTTCTCGAGAGCTCGATCGATCATGTCAGCAAAGCTA
JMSF006F14+           TTCTGATCAGTCTCATTGAATTCCTTCTCGAGAGCTCGATCGATCATGTCAGCAAAGCTA
JMSF036O08+           TTCTGATCAGTCTCATTGAATTCCTTCTCGAGAGCTCGATCGATCATGTCAGCAAAGCTA
JMSF050J10+           TTCTGATCAGTCTCATTGAATTCCTTCTCGAGAGCTCGATCGATCATGTCAGCAAAGCTA
JMSF019D14+                                     CTCGAGAGCTCGATCGATCATGTCAGCAAAGCTA
                      ____________________________________________________________
consensus             TTCTGATCAGTCTCATTGAATTCCTTCTCGAGAGCTCGATCGATCATGTCAGCAAAGCTA
 
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rJMSF012H19-          TCCTCCTTG                                                   
JMSF041A13+           TCCTCCTTGGGGCGAGAGTGGGGTCCGTTGCTGGAGGAGTTGAATTCAGAGGCATTAGCA
JMSF006F14+           TCCTCCTTGGGGCGAGAGTGGGGTCCGTTGCTGGAGGAGTTGAATTCAGAGGCATTAGCA
JMSF036O08+           TCCTCCTTGGGGCGAGAGTGGGGTCCGTTGCTGGAGGAGTTGAATTCAGAGGCATTAGCA
JMSF050J10+           TCCTCCTTGGGGCGAGAGTGGGGTCCGTTGCTGGAGGAGTTGAATTCAGAGGCATTAGCA
JMSF019D14+           TCCTCCTTGGGGCGAGAGTGGGGTCCGTTGCTGGAGGAGTTGAATTCAGAGGCATTAGCA
                      ____________________________________________________________
consensus             TCCTCCTTGGGGCGAGAGTGGGGTCCGTTGCTGGAGGAGTTGAATTCAGAGGCATTAGCA
 
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JMSF041A13+           GCGGCGCCATCGGCATCCAGCAGCTGATCTGCTTCGGAGAGCGCAAATGCGAAGACGGCG
JMSF006F14+           GCGGCGCCATCGGCATCCAGCAGCTGATCTGCTTCGGAGAGCGCAAATGCGAAGACGGCG
JMSF036O08+           GCGGCGCCATCGGCATCCAGCAGCTGATCTGCTTCGGAGAGCGCAAATGCGAAGACGGCG
JMSF050J10+           GCGGCGCCATCGGCATCCAGCAGCTGATCTGCTTCGGAGAGCGCAAATGCGAAGACGGCG
JMSF019D14+           GCGGCGCCATCGGCATCCAGCAGCTGATCTGCTTCGGAGAGCGCAAATGCGAAGACGGCG
                      ____________________________________________________________
consensus             GCGGCGCCATCGGCATCCAGCAGCTGATCTGCTTCGGAGAGCGCAAATGCGAAGACGGCG
 
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JMSF041A13+           GAAGTAGTAGGCGTAGTAGCAGAAAGCAAAGCTAGAGAGATGATAAGGAAAGCGAGAGTA
JMSF006F14+           GAAGTAGTAGGCGTAGTAGCAGAAAGCAAAGCTAGAGAGATGATAAGGAAAGCGAGAGTA
JMSF036O08+           GAAGTAGTAGGCGTAGTAGCAGAAAGCAAAGCTAGAGAGATGATAAGGAAAGCGAGAGTA
JMSF050J10+           GAAGTAGTAGGCGTAGTAGCAGAAAGCAAAGCTAGAGAGATGATAAGGAAAGCGAGAGTA
JMSF019D14+           GAAGTAGTAGGCGTAGTAGCAGAAAGCAAAGCTAGAGAGATGATAAGGAAAGCGAGAGTA
JMSF012H19+                        TAGTAGCAGAAAGCAAAGCTAGAGAGATGATAAGGAAAGCGAGAGTA
                      ____________________________________________________________
consensus             GAAGTAGTAGGCGTAGTAGCAGAAAGCAAAGCTAGAGAGATGATAAGGAAAGCGAGAGTA
 
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JMSF041A13+           GAGAGAATTGGGAGGTCGAGGAGGGAGCATGATGAGGGCGGCGGCGAAGACGAGCTCATC
JMSF006F14+           GAGAGAATTGGGAGGTCGAGGAGGGAGCATGATGAGGGCGGCGGCGAAGACGAGCTCATC
JMSF036O08+           GAGAGAATTGGGAGGTCGAGGAGGGAGCATGATGAGGGCGGCGGCGAAGACGAGCTCATC
JMSF050J10+           GAGAGAATTGGGAGGTCGAGGAGGGAGCATGATGAGGGCGGCGGCGAAGACGAGCTCATC
JMSF019D14+           GAGAGAATTGGGAGGTCGAGGAGGGAGCATGATGAGGGCGGCGGCGAAGACGAGCTCATC
JMSF012H19+           GAGAGAATTGGGAGGTCGAGGAGGGAGCATGATGAGGGCGGCGGCGAAGACGAGCTCATC
                      ____________________________________________________________
consensus             GAGAGAATTGGGAGGTCGAGGAGGGAGCATGATGAGGGCGGCGGCGAAGACGAGCTCATC
 
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JMSF041A13+           CTCCTCCTAGACATTGCACCGGCGCACGATACGCAGTCCCCGGCGCAGGCTAAGAGGATC
JMSF006F14+           CTCCTCCTAGACATTGCACCGGCGCACGATACGCAGTCCCCGGCGCAGGCTAAGAGGATC
JMSF036O08+           CTCCTCCTAGACATTGCACCGGCGCACGATACGCAGTCCCCGGCGCAGGCTAAGAGGATC
JMSF050J10+           CTCCTCCTAGACATTGCACCGGCGCACGATACGCAGTCCCCGGCGCAGGCTAAGAGGATC
JMSF019D14+           CTCCTCCTAGACATTGCACCGGCGCACGATACGCAGTCCCCGGCGCAGGCTAAGAGGATC
JMSF012H19+           CTCCTCCTAGACATTGCACCGGCGCACGATACGCAGTCCCCGGCGCAGGCTAAGAGGATC
                      ____________________________________________________________
consensus             CTCCTCCTAGACATTGCACCGGCGCACGATACGCAGTCCCCGGCGCAGGCTAAGAGGATC
 
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JMSF041A13+           CGGTGCGGTGTCGGTGTGTCGCTGTCAAGAAGGCGGTAC                     
JMSF006F14+           CGGTGCGGTGTCGGTGTGTCGCTGTCAAGAAGGC                          
JMSF036O08+           CGGTGCGGTGTCGGTGTGTCGCTGTCAAGAAGGCGGCACAG                   
JMSF050J10+           CGGTGCGGTGTCGGTGTGTCGCTGTCAAGAAGGCGGTACAG                   
JMSF019D14+           CGGTGCGGTGTCGGTGTGTCGCTGTCAAGAAGGCGGTACAGTAAC               
JMSF012H19+           CGGTGCGGTGTCGGTGTGTCGCTGTCAAGAAGGCGGTACAGTAACACTCACTGCCGTTTA
                      ____________________________________________________________
consensus             CGGTGCGGTGTCGGTGTGTCGCTGTCAAGAAGGCGGTACAGTAACACTCACTGCCGTTTA
 
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JMSF012H19+           AGCGTCTAATTATTATTATACGAACATACCCGGAGAAAGCTAGACTCTACTCTCTAGCCA
                      ____________________________________________________________
consensus             AGCGTCTAATTATTATTATACGAACATACCCGGAGAAAGCTAGACTCTACTCTCTAGCCA