Contig 009241:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF010P17Sequence245017774762009241 (2)ref|XP_006451058.1|2e-83hypothetical protein CICLE_v10008805mg [Citrus clementina] ref|XP_006475746.1| P
JMSF011H19Sequence421009241 (2)ref|XP_008809021.1|2e-23PREDICTED: syntaxin-32-like [Phoenix dactylifera]747020319ref|XP_006344919.1|46.2PREDICTED: uncharacterized protein LOC102605499 [Solanum tuberosum]

Alignment

This contig is upended


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rJMSF010P17-                                               ATAATAAAGAAAAAAAGGGAAAA
                      ____________________________________________________________
consensus                                                  ATAATAAAGAAAAAAAGGGAAAA
 
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rJMSF010P17-          ATATTTCTTTTCATCCCAATTTACAGAAAGATTTAGGCTACAAAGAATAGGAAGATCATG
                      ____________________________________________________________
consensus             ATATTTCTTTTCATCCCAATTTACAGAAAGATTTAGGCTACAAAGAATAGGAAGATCATG
 
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rJMSF010P17-          AGGAATACAATCAATACCAGGAATATCTTGATCATTAGCCACCTGTTGGATGATATGCTG
                      ____________________________________________________________
consensus             AGGAATACAATCAATACCAGGAATATCTTGATCATTAGCCACCTGTTGGATGATATGCTG
 
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rJMSF010P17-          TTGAAGTACCTCATCAGTTGCCCTTGTGCCCCTTCCACATTTGCCAGCGTGTCTTCCATG
                      ____________________________________________________________
consensus             TTGAAGTACCTCATCAGTTGCCCTTGTGCCCCTTCCACATTTGCCAGCGTGTCTTCCATG
 
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rJMSF010P17-          TTTTCGTCGATCCTGATTGCCAGTTCCCCTTGCTGAGAAACCATGGTTGCCAATTGTGTG
                      ____________________________________________________________
consensus             TTTTCGTCGATCCTGATTGCCAGTTCCCCTTGCTGAGAAACCATGGTTGCCAATTGTGTG
 
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rJMSF010P17-          AAAATGCTACTCAACTCATGAATAGTTGATTCAACACTATGAAGGGCCTGATTCCTGCTT
                      ____________________________________________________________
consensus             AAAATGCTACTCAACTCATGAATAGTTGATTCAACACTATGAAGGGCCTGATTCCTGCTT
 
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rJMSF010P17-          TGCGTGTAACTGTCTTGTAAAGGAGCCAACTGTTGCTGCTGTTGACCTTGCTGCTGTTGT
                      ____________________________________________________________
consensus             TGCGTGTAACTGTCTTGTAAAGGAGCCAACTGTTGCTGCTGTTGACCTTGCTGCTGTTGT
 
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rJMSF010P17-          AGCAATGGCTGGGATTCTCCATCTGCCTTGTTTCTAAGAGGTAACTGAGATGAGGATGCA
                      ____________________________________________________________
consensus             AGCAATGGCTGGGATTCTCCATCTGCCTTGTTTCTAAGAGGTAACTGAGATGAGGATGCA
 
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rJMSF010P17-          GACTTATTAACCCATGGAGGGGGAGATACTGATGCAGAGCTACTAGCAGCTGCTCTGGTA
                      ____________________________________________________________
consensus             GACTTATTAACCCATGGAGGGGGAGATACTGATGCAGAGCTACTAGCAGCTGCTCTGGTA
 
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rJMSF010P17-          GCTAAGGGACGCTGGCGAATGAAAGGATTAGTGGACTCTTTTGATGCATTTGAAGAAAAT
                      ____________________________________________________________
consensus             GCTAAGGGACGCTGGCGAATGAAAGGATTAGTGGACTCTTTTGATGCATTTGAAGAAAAT
 
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rJMSF010P17-          AGCTGCCTTCTGTTCTCATGAACCTTCAAGTTCTCGGTCCGAATGGTGAGGACCTCTTTG
JMSF011H19+                                           CTCGGTCCGAATGGTGAGGACCTCTTTG
                      ____________________________________________________________
consensus             AGCTGCCTTCTGTTCTCATGAACCTTCAAGTTCTCGGTCCGAATGGTGAGGACCTCTTTG
 
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rJMSF010P17-          AACTCCTTTGTGGTGCTCATTAAGCGATTTTTAAGGTTGTCAACAACAGTGGTTGTATGG
JMSF011H19+           AACTCCTTTGTGGTGCTCATTAAGCGATTTTTAAGGTTGTC----ACAGTGGTTGTATGG
                      ____________________________________________________________
consensus             AACTCCTTTGTGGTGCTCATTAAGCGATTTTTAAGGTTGTCAACAACAGTGGTTGTATGG
 
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rJMSF010P17-          GTGGTCGTGTCTGTAGACATGCTTCCACTTTCATTTTGCGAGTTGCTAAGGAGCTGCANA
JMSF011H19+           GTCATTGTGTCTGTAGACATACTTCCACTTTCATTTTGGGAGTTGCTAAGGAGTTGCAGA
                      ____________________________________________________________
consensus             GTGGTTGTGTCTGTAGACATGCTTCCACTTTCATTTTGGGAGTTGCTAAGGAGTTGCAGA
 
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rJMSF010P17-          TCTACTACAGCGGCATTAA                                         
JMSF011H19+           TCTACTACAGCGGCATTAAGTGCAGAGATGTCCTGCTTGATCACAGCTGTCAACTCTTGA
                      ____________________________________________________________
consensus             TCTACTACAGCGGCATTAAGTGCAGAGATGTCCTGCTTGATCACAGCTGTCAACTCTTGA
 
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JMSF011H19+           ATCTCTATCGTTGGATCATAAAAAACTGATGTTCTTTTTGCCACAGGAATGATGGTTGGA
                      ____________________________________________________________
consensus             ATCTCTATCGTTGGATCATAAAAAACTGATGTTCTTTTTGCCACAGGAATGATGGTTGGA
 
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JMSF011H19+           GCCGAGGGAACATTGGAGGATATATTTGAAATCAGCGCTGGAATCCATTCCGCAACAGCG
                      ____________________________________________________________
consensus             GCCGAGGGAACATTGGAGGATATATTTGAAATCAGCGCTGGAATCCATTCCGCAACAGCG
 
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JMSF011H19+           GCCATCAACGCTACATGTTGACCTTTAATTGATGAGTCACCTCAGAAAAGTTTCAATCCC
                      ____________________________________________________________
consensus             GCCATCAACGCTACATGTTGACCTTTAATTGATGAGTCACCTCAGAAAAGTTTCAATCCC