Contig 009237:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF011E17Sequence468009237 (3)
JMSF019N23Sequence256009237 (3)743006467 (4)ref|XP_006352713.1|197PREDICTED: uncharacterized protein LOC102605986 [Solanum tuberosum]
JMSF040C07Sequence703009237 (3)909006467 (4)ref|XP_009769918.1|261PREDICTED: uncharacterized protein LOC104220702 [Nicotiana sylvestris] ref|XP_00

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF040C07+ GGAAANTCATAGCTATCAGGAGAACATATGTGATCGTCCCAAAAATCAA
                      ____________________________________________________________
consensus GGAAANTCATAGCTATCAGGAGAACATATGTGATCGTCCCAAAAATCAA
 
. : . : . : . : . : . :
JMSF040C07+ GTGGCCTGAAGTAAGAAAATTAATCGGTTAGGTATCATCCATCTCCTAACACCTGAAGCT
                      ____________________________________________________________
consensus GTGGCCTGAAGTAAGAAAATTAATCGGTTAGGTATCATCCATCTCCTAACACCTGAAGCT
 
. : . : . : . : . : . :
JMSF040C07+ AGATATGCTATGACAAATTGACAATTACAACGCATCCAAACTCCAAAGAATTCACAGCCA
                      ____________________________________________________________
consensus AGATATGCTATGACAAATTGACAATTACAACGCATCCAAACTCCAAAGAATTCACAGCCA
 
. : . : . : . : . : . :
JMSF040C07+ TACAAATTTAAGTAAGCTAATGTTGCAGTTATGCTGAAACACAAGGCTATCATCGTTGAA
                      ____________________________________________________________
consensus TACAAATTTAAGTAAGCTAATGTTGCAGTTATGCTGAAACACAAGGCTATCATCGTTGAA
 
. : . : . : . : . : . :
JMSF040C07+ CTATTAATATAAGATAGAAGCAAGTGGACAGGACAATAGCGGAAGAAGATAGCCA-TTGC
JMSF011E17+ GATAGAAGCAAGTGGACAGGACAATAGCGGAAGAAGATAGCCATTTGC
                      ____________________________________________________________
consensus CTATTAATATAAGATAGAAGCAAGTGGACAGGACAATAGCGGAAGAAGATAGCCATTTGC
 
. : . : . : . : . : . :
JMSF040C07+ TTATTCTGAAAATCACCTAATCGAGAAACAGGAATCGCAGTTTTTCCATTATACAGATAA
JMSF011E17+ TTATTCTGAAAATCACCTAATCGAGAAACAGGAATCGCAGTTTTTCCATTATACAGATAA
                      ____________________________________________________________
consensus TTATTCTGAAAATCACCTAATCGAGAAACAGGAATCGCAGTTTTTCCATTATACAGATAA
 
. : . : . : . : . : . :
JMSF040C07+ TTTACTAAACATACTATCTGAATATTCATTTTAATATATATGTGTGTGTGAGAGAGAGAG
JMSF011E17+ TTTACTAAACATACTATCTGAATATTCATTTTAATATATATGTGTGTGTGAGAGAGAGAG
                      ____________________________________________________________
consensus TTTACTAAACATACTATCTGAATATTCATTTTAATATATATGTGTGTGTGAGAGAGAGAG
 
. : . : . : . : . : . :
JMSF019N23+ GTAGTTGCAAAGCCAACGGAG
JMSF040C07+ TTTAATCGATGAAAATTCGAGCTAACAGTTGCTCTTGCAGTAGTTGCAAAGCCAACGGAG
JMSF011E17+ TTTAATCGATGAAAATTCGAGCTAACAGTTGCTCTTGCAGTAGTTGCAAAGCCAACGGAG
                      ____________________________________________________________
consensus TTTAATCGATGAAAATTCGAGCTAACAGTTGCTCTTGCAGTAGTTGCAAAGCCAACGGAG
 
. : . : . : . : . : . :
JMSF019N23+ GTAACAGCGGCAACAGGCGATCAAACAAGTCCGATGAAAGATGATAAACGCCGGAGAGGA
JMSF040C07+ GTAACAGCGGCAACAGGCGATCAAACAAGTCCGATGAAAGATGATAAACGCCGGAGAGGA
JMSF011E17+ GTAACAGCGGCAACAGGCGATCAAACAAGTCCGATGAAAGATGATAAACGCCGGAGAGGA
                      ____________________________________________________________
consensus GTAACAGCGGCAACAGGCGATCAAACAAGTCCGATGAAAGATGATAAACGCCGGAGAGGA
 
. : . : . : . : . : . :
JMSF019N23+ GATTAGAATTATCACCGCGAAGGAGATCATGTTTGACAACGCCCAAGCACAGATTGACTA
JMSF040C07+ GATTAGAATTATCACCGCGAAGGAGATCATGTTTGACAACGCCCAAGCACAGATTGACTA
JMSF011E17+ GATTAGAATTATCACCGAGAAGGAGATCATGTTTGACAACGCCCAAGCACAGATTGACTA
                      ____________________________________________________________
consensus GATTAGAATTATCACCGCGAAGGAGATCATGTTTGACAACGCCCAAGCACAGATTGACTA
 
. : . : . : . : . : . :
JMSF019N23+ ACGACGGGACTCCACTCATGCTGGAGGTTTCACTGCTCGCCATAGTCCATAGATGTTCGT
JMSF040C07+ ACGACGGGACTCCACTCATGCTGGAGGTTTCACTGCTCGCCATAGTCCATAGATGTTCGT
JMSF011E17+ ACGACGGGACTCCACTCATGCTGGAGGTTTCACTGCTCGCCATAGTCCATAGATGTTCGT
                      ____________________________________________________________
consensus ACGACGGGACTCCACTCATGCTGGAGGTTTCACTGCTCGCCATAGTCCATAGATGTTCGT
 
. : . : . : . : . : . :
JMSF019N23+ TCTCAAAAGGATTAACTGCAACTTGGAACCGCTTCTCACTATTAAGCAAATTG
JMSF040C07+ TCTCAAAAGGATTAACTGCAACTTGGAACCGCTTCTCACTATTAAGCAAATTG
JMSF011E17+ TCTCAAAAGGATTAACTGCAACTTGGAACCGCTTCTCACTATTAAGCAAATTGCAAAACC
                      ____________________________________________________________
consensus TCTCAAAAGGATTAACTGCAACTTGGAACCGCTTCTCACTATTAAGCAAATTGCAAAACC