Contig 009231:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS120E04Sequence622009231 (2)emb|CDP10165.1|5e-45unnamed protein product [Coffea canephora]
JMSF010M08Sequence247009231 (2)gb|EYU39957.1|9e-07hypothetical protein MIMGU_mgv1a001233mg [Erythranthe guttata]681009135 (4)ref|XP_009765947.1|5e-52PREDICTED: gamma-tubulin complex component 3 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFS120E04+                  CCATCAACAGAAAACTTCTCTACTTTTCCTACATNTGTTGAATATCCCAAATT
                      ____________________________________________________________
consensus                    CCATCAACAGAAAACTTCTCTACTTTTCCTACATNTGTTGAATATCCCAAATT
 
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JMFS120E04+           TCCATCCAAAGCCCTCAAAGTTTCAGAATTATCCAATGTACCAAGAGACTTTGAAGCACC
                      ____________________________________________________________
consensus             TCCATCCAAAGCCCTCAAAGTTTCAGAATTATCCAATGTACCAAGAGACTTTGAAGCACC
 
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JMFS120E04+           ATTTCCAACTCGAGAATAACCGTTTGATTGCCCATCAAACAACACGGGTAATCCCCCATT
                      ____________________________________________________________
consensus             ATTTCCAACTCGAGAATAACCGTTTGATTGCCCATCAAACAACACGGGTAATCCCCCATT
 
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JMFS120E04+           CACAGCGGAGCTGAAAACCCCAACTGACACCCCAGAGAGGGGCTGGCTTTTTCGGGCCTT
                      ____________________________________________________________
consensus             CACAGCGGAGCTGAAAACCCCAACTGACACCCCAGAGAGGGGCTGGCTTTTTCGGGCCTT
 
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JMFS120E04+           ACGATCTTCGGAGATGGTTTTGATCAAATAAAGCAGGGCCCACTTGTTCTTAACACTTCC
                      ____________________________________________________________
consensus             ACGATCTTCGGAGATGGTTTTGATCAAATAAAGCAGGGCCCACTTGTTCTTAACACTTCC
 
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JMFS120E04+           AGGGCCGGTTTTGGACGAAAATTTGGAATATAAATCAGCGAAAGTGAGGGCTTCGGATGA
                      ____________________________________________________________
consensus             AGGGCCGGTTTTGGACGAAAATTTGGAATATAAATCAGCGAAAGTGAGGGCTTCGGATGA
 
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JMFS120E04+           CTTACCCTGAGTGGCCAACTGTCGCTTGATGGACTCAGCCATGGAGGCCTCGTCGACGGC
JMSF010M08+                                                                CGACGGC
                      ____________________________________________________________
consensus             CTTACCCTGAGTGGCCAACTGTCGCTTGATGGACTCAGCCATGGAGGCCTCGTCGACGGC
 
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JMFS120E04+           GATGGTAGGAGTCATGCGACTCGAGAGGATGCGAACCGCATACTTGAATGCTTGCTGGTA
JMSF010M08+           GATGGTAGGAGTCATGCGACTCGAGAGGATGCGAACCGCATACTTGAATGCTTGCTGGTA
                      ____________________________________________________________
consensus             GATGGTAGGAGTCATGCGACTCGAGAGGATGCGAACCGCATACTTGAATGCTTGCTGGTA
 
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JMFS120E04+           CTGTTGCTCCGAGGGGCTAGGGTTAGGGTTAGAGTCGGAGGAGGTGGAAGACTGCGGGGA
JMSF010M08+           CTGTTGCTCCGAGGGGCTAGGGTTAGGGTTAGAGTCGGAGGAGGTGGAAGACTGCGGGGA
                      ____________________________________________________________
consensus             CTGTTGCTCCGAGGGGCTAGGGTTAGGGTTAGAGTCGGAGGAGGTGGAAGACTGCGGGGA
 
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JMFS120E04+           GGTGTACAGTAAACGGTGGACTAGCTCTTTGACTAGATCTAAAACCCGCTGGTCGTCATC
JMSF010M08+           GGTGTACAGTAAACGGTGGACTAGCTCTTTGACTAGATCTAAAACCCGCTGGTCGTCATC
                      ____________________________________________________________
consensus             GGTGTACAGTAAACGGTGGACTAGCTCTTTGACTAGATCTAAAACCCGCTGGTCGTCATC
 
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JMFS120E04+           TGCCATGGTTGCCGGAGGACGGTACCTGC                               
JMSF010M08+           TGCCATGGTTGCCGGAGGACGGTACCTGCCGGCGGGTGGGTAGTGGGTGGGGGACTGTCC
                      ____________________________________________________________
consensus             TGCCATGGTTGCCGGAGGACGGTACCTGCCGGCGGGTGGGTAGTGGGTGGGGGACTGTCC