Contig 009226:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS036B11Sequence612009226 (2)gb|AAV88066.1|5e-05NBS-LRR protein [Ipomoea batatas]
JMSF009P22Sequence268009226 (2)721016034ref|XP_009597655.1|5e-16PREDICTED: putative late blight resistance protein homolog R1A-10 isoform X2 [N

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS036B11+ AGCTGGTACTCCTCCTTGGCTTTCCCCAACTCTT
                      ____________________________________________________________
consensus AGCTGGTACTCCTCCTTGGCTTTCCCCAACTCTT
 
. : . : . : . : . : . :
JMFS036B11+ CAGTGATGGCATCAATGTCTTGTTCAGCTTGATGCAAAATACGACGGAATTTGAGGCAAG
                      ____________________________________________________________
consensus CAGTGATGGCATCAATGTCTTGTTCAGCTTGATGCAAAATACGACGGAATTTGAGGCAAG
 
. : . : . : . : . : . :
JMFS036B11+ GATGAGATTTTCCCCTTAGCGGATGCAAAATTTGATGAAGCCTCTGGCAATGATGAGTAC
                      ____________________________________________________________
consensus GATGAGATTTTCCCCTTAGCGGATGCAAAATTTGATGAAGCCTCTGGCAATGATGAGTAC
 
. : . : . : . : . : . :
JMFS036B11+ TTGTCTGCTGAATGTTAAGGCTTTGGCAATGATGAGTGCTTTTCTCACCCTGTGAAATGT
                      ____________________________________________________________
consensus TTGTCTGCTGAATGTTAAGGCTTTGGCAATGATGAGTGCTTTTCTCACCCTGTGAAATGT
 
. : . : . : . : . : . :
JMFS036B11+ GATTTTTCGGTGGCTGAAATGTCTGATCCACAAATCTGTCAAAAATATCAAAAATTCCTC
                      ____________________________________________________________
consensus GATTTTTCGGTGGCTGAAATGTCTGATCCACAAATCTGTCAAAAATATCAAAAATTCCTC
 
. : . : . : . : . : . :
JMFS036B11+ GAAAAATTCTGTTTTCCTCTTCTTCGAGTTGAATTTCATCCTCATAAAGATGTAGTACTT
                      ____________________________________________________________
consensus GAAAAATTCTGTTTTCCTCTTCTTCGAGTTGAATTTCATCCTCATAAAGATGTAGTACTT
 
. : . : . : . : . : . :
JMFS036B11+ GGAGTTCAATTTCATCCTCAATCCTGGAAGCTACATCTCTGAGCTTCGTTTCCAACTCTT
                      ____________________________________________________________
consensus GGAGTTCAATTTCATCCTCAATCCTGGAAGCTACATCTCTGAGCTTCGTTTCCAACTCTT
 
. : . : . : . : . : . :
JMFS036B11+ TTATTGCTTCAACACCATCCATTCTATTCTCATCGAATTGATCCATCAGCACTCCAAGCT
                      ____________________________________________________________
consensus TTATTGCTTCAACACCATCCATTCTATTCTCATCGAATTGATCCATCAGCACTCCAAGCT
 
. : . : . : . : . : . :
JMFS036B11+ TGTTGTGGAGAGATAGGACCAAGTCTTTGTTGCAGGGGATGAGTTGGTTTTGTTGTAGAA
JMSF009P22+ AGTTGATTTTGTTGTAGAA
                      ____________________________________________________________
consensus TGTTGTGGAGAGATAGGACCAAGTCTTTGTTGCAGGGGATGAGTTGGTTTTGTTGTAGAA
 
. : . : . : . : . : . :
JMFS036B11+ TTGGACGAGGCAGAGGTTGCAAGAACTCAAGCTCAAGTGTCCTCATAAGAGAAAGTACAA
JMSF009P22+ TTGGACGAGGGTGAGTTTGCAAGAACTCAAGCTCCATTGTTCTCATAAGAGAAAGTACAG
                      ____________________________________________________________
consensus TTGGACGAGGGTGAGTTTGCAAGAACTCAAGCTCCATTGTTCTCATAAGAGAAAGTACAG
 
. : . : . : . : . : . :
JMFS036B11+ CTACACAAGCCATTCTTCT
JMSF009P22+ CCACACAAGCCATTTTTCTGTATTGGTGTATGTGTTATATGTAAATGGGAGAGAGAGAGA
                      ____________________________________________________________
consensus CTACACAAGCCATTTTTCTGTATTGGTGTATGTGTTATATGTAAATGGGAGAGAGAGAGA
 
. : . : . : . : . : . :
JMSF009P22+ GAGATAGAGGGAGAGAGTTTTGTTTATTTTTTATTTTTTGAAAACAAGAGAGTTTTGTTT
                      ____________________________________________________________
consensus GAGATAGAGGGAGAGAGTTTTGTTTATTTTTTATTTTTTGAAAACAAGAGAGTTTTGTTT
 
. : . : . : . : . : . :
JMSF009P22+ ATCTGATCTGAGTTTGAATTGTTTGAGTGAAGGTTAGCAAAAGGAAGATGAAGATCGATC
                      ____________________________________________________________
consensus ATCTGATCTGAGTTTGAATTGTTTGAGTGAAGGTTAGCAAAAGGAAGATGAAGATCGATC