Contig 009223:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF029E15+                                               GCAAGCATAAGAACAGTCTTTAAG
                      ____________________________________________________________
consensus                                                 GCAAGCATAAGAACAGTCTTTAAG
 
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JMSF029E15+           GACAGCTGCCGACTACAGAAGTTAAAAAGATNTTCTAGACTAGGCCCTAGTAAATCAATC
                      ____________________________________________________________
consensus             GACAGCTGCCGACTACAGAAGTTAAAAAGATNTTCTAGACTAGGCCCTAGTAAATCAATC
 
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JMSF029E15+           NCAAGGCCNTTATAGTCGCCTTCAACNCCATACCNTTTGACNTTGGGGATTCCGGTTCCT
                      ____________________________________________________________
consensus             NCAAGGCCNTTATAGTCGCCTTCAACNCCATACCNTTTGACNTTGGGGATTCCGGTTCCT
 
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JMSF029E15+           CCNTGAAGTAGTTTGTACAACTTCGCCTCATAAAGTAGTTGNGGGNGNTTNGTCTTTACA
                      ____________________________________________________________
consensus             CCNTGAAGTAGTTTGTACAACTTCGCCTCATAAAGTAGTTGNGGGNGNTTNGTCTTTACA
 
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JMSF029E15+           TTTTCAAGNTTAATAGCAACCTNTTCNTTAGTNTGAATGTTCGTCCCGAGATAGATCTNT
                      ____________________________________________________________
consensus             TTTTCAAGNTTAATAGCAACCTNTTCNTTAGTNTGAATGTTCGTCCCGAGATAGATCTNT
 
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JMSF029E15+           CCAAACGAGCCGCCNCCGATTTTCCGACCCNGCCGGAACTTATTACCAACNCGNGGNTCC
JMFF019F14+                                                                    TCC
                      ____________________________________________________________
consensus             CCAAACGAGCCGCCNCCGATTTTCCGACCCNGCCGGAACTTATTACCAACNCGNGGNTCC
 
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JMSF029E15+           ATCAAAACCTNTNTTTGATTTCAAAAATCAAATGAAACCCTAAGTACAAAGTTATTCAAA
JMFF019F14+           ATCAAAACCTNTNTTTGATTTCAAAAATCAAATGAAACCCTAAGTACAAAGTTATTCAAA
                      ____________________________________________________________
consensus             ATCAAAACCTNTNTTTGATTTCAAAAATCAAATGAAACCCTAAGTACAAAGTTATTCAAA
 
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JMSF029E15+           GNGAAGNGGNGAAGTACCTAAATTATACTCCGTAATTTGTATAGGAAAGAAGAAAAAAAA
JMFF019F14+           GAGAAGCGGAGAAGTACCTAAATTATACTCCGTAATTTGTATAGGAAAGAAGAAAAAAAA
JMSF030K06+                                                               AAAAAAAA
JMSF009I22+                                                             GAAAAAAAAA
                      ____________________________________________________________
consensus             GAGAAGCGGAGAAGTACCTAAATTATACTCCGTAATTTGTATAGGAAAGAAGAAAAAAAA
 
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JMSF029E15+           AAATTAAAGCAAGAATAGAGATCCCAGAAACATTTTTTGGGGATGAATTTCCAGATTTTC
JMFF019F14+           AAATTAAAGCAAGAATAGAGATCCCAGAAACATTTTTTGGGGATGAATTTCCAGATTTTC
JMSF030K06+           AAATTAAAGCAAGAATAGAGATCCCAGAAACATTTTTTGGGGATGAATTTCCAGATTTTC
JMSF009I22+           AAATTAAAGCAAGAATAGAGATCCCAGAAACATTTTTTGGGGATGAATTTCCAGATTTTC
                      ____________________________________________________________
consensus             AAATTAAAGCAAGAATAGAGATCCCAGAAACATTTTTTGGGGATGAATTTCCAGATTTTC
 
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JMSF029E15+           TCAGAATTATCTACATAGCTGCTTCATTGAGCATTGATCCCTTCGAATCGTGATCTTTCG
JMFF019F14+           TCAGAATTATCTACATAGCTGCTTCATTGAGCATTGATCCCTTCGAATCGTGATCTTTCG
JMSF030K06+           TCAGAATTATCTACATAGCTGCTTCATTGAGCATTGATCCCTTCGAATCGTGATCTTTCG
JMSF009I22+           TCAGAATTATCTACATAGCTGCTTCATTGAGCATTGATCCCTTCGAATCGTGATCTTTCG
                      ____________________________________________________________
consensus             TCAGAATTATCTACATAGCTGCTTCATTGAGCATTGATCCCTTCGAATCGTGATCTTTCG
 
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JMSF029E15+           TCTTTTCAACTTTCATAGCGATTATGCGTGTTTCTCTT                      
JMFF019F14+           TCTTTTCAACTTTCATAGCGATTATGCGTGTTTCTCTTTCAGGAAGAATCATCTTCTTCT
JMSF030K06+           TCTTTTCAACTTTCATAGCGATTATGCGTGTTTCTCTT                      
JMSF009I22+           TCTTTTCAACTTTCATAGCGATTATGCGTGTTTCTCTTTCAGGAAGAATCATCTTCTTCT
                      ____________________________________________________________
consensus             TCTTTTCAACTTTCATAGCGATTATGCGTGTTTCTCTTTCAGGAAGAATCATCTTCTTCT
 
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JMFF019F14+           TTTTCCTCTTTTCAGCTCTTCTTTTTCTAACGCTGTTCATGGTACGATGATTTCACAAT 
JMSF009I22+           TTTTCCTCTTTTCAGCTCTTCTTTTTCTAACGCTGTTCATGGTACGATGATTTCACAATC
                      ____________________________________________________________
consensus             TTTTCCTCTTTTCAGCTCTTCTTTTTCTAACGCTGTTCATGGTACGATGATTTCACAATC