Contig 009222:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF025D14+                                                    GTGGAATGNTGTTAAAGCG
                      ____________________________________________________________
consensus                                                      GTGGAATGNTGTTAAAGCG
 
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JMSF025D14+           CAGAACATGGTCAGACAGTGTAGAGCCAGGGAATACATCCCCTCCAATTGCAATACCTTC
                      ____________________________________________________________
consensus             CAGAACATGGTCAGACAGTGTAGAGCCAGGGAATACATCCCCTCCAATTGCAATACCTTC
 
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JMSF025D14+           GTAAATTCCATCCGTCACTCGGGCAATGGTATTGTACAATTCATTAGACATACCACCAGA
JMSF028D12+              AATTCCATCCGTCACTCGGGCAATGGTATTGTACAATTCATTAGACATACCACCAGA
                      ____________________________________________________________
consensus             GTAAATTCCATCCGTCACTCGGGCAATGGTATTGTACAATTCATTAGACATACCACCAGA
 
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JMSF025D14+           TTTGGAAACAAAGCCAACAGATCCTGGTCTGTAAAGCTTGCAATGAATAATGTTATCAAT
JMSF028D12+           TTTGGAAACAAAGCCAACAGATCCTGGTCTGTAAAGCTTGCAATGAATAATGTTATCAAT
                      ____________________________________________________________
consensus             TTTGGAAACAAAGCCAACAGATCCTGGTCTGTAAAGCTTGCAATGAATAATGTTATCAAT
 
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JMSF025D14+           GGTCCCAGCAGTGTCACCAATTTTAAAAGCTCCAGCCTGAATTCCTCCAACCGTAGCTGG
JMSF028D12+           GGTCCCAGCAGTGTCACCAATTTTAAAAGCTCCAGCCTGAATTCCTCCAACCGTAGCTGG
                      ____________________________________________________________
consensus             GGTCCCAGCAGTGTCACCAATTTTAAAAGCTCCAGCCTGAATTCCTCCAACCGTAGCTGG
 
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JMSF025D14+           ACCAATAACTACCTTGTTGTTTGCTTTTGCATAAGCAATCAACTGCTTGGTGTCTGACTC
JMSF028D12+           ACCAATAACTACCTTGTTGTTTGCTTTTGCATAAGCAATCAACTGCTTGGTGTCTGACTC
                      ____________________________________________________________
consensus             ACCAATAACTACCTTGTTGTTTGCTTTTGCATAAGCAATCAACTGCTTGGTGTCTGACTC
 
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JMSF025D14+           AGGAACACCTTCAGCTATGATAGCCACTACTCTAATGGTTGGCTGCTTGAGAGCAGCCAT
JMSF028D12+           AGGAACACCTTCAGCTATGATAGCCACTACTCTAATGGTTGGCTGCTTGAGAGCAGCCAT
                      ____________________________________________________________
consensus             AGGAACACCTTCAGCTATGATAGCCACTACTCTAATGGTTGGCTGCTTGAGAGCAGCCAT
 
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JMSF025D14+           GGAGGAAGCAGCAGCACTTCTAAATGATGCAAAGTTAATTAAAACATCAGCTGTAGGATG
JMSF028D12+           GGAGGAAGCAGCAGCACTTCTAAATGATGCAAAGTTAATTAAAACATCAGCTGTAGGATG
                      ____________________________________________________________
consensus             GGAGGAAGCAGCAGCACTTCTAAATGATGCAAAGTTAATTAAAACATCAGCTGTAGGATG
 
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JMSF025D14+           AGCGGCACAAGCAGCTTCGATGC                                     
JMSF028D12+           AGCGGCACAAGCAGCTTCGATGCCTGGATGGACAGGAATTGCAATCTCCTCCTGACCGAA
JMSF009H21+                                                             CCTGACCGAA
                      ____________________________________________________________
consensus             AGCGGCACAAGCAGCTTCGATGCCTGGATGGACAGGAATTGCAATCTCCTCCTGACCGAA
 
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JMSF028D12+           GAAGAGTTTCTGGAATCCTTCCGAACCAGGATTTATAATTCCAGCAACGGAAGGAGTTTC
JMSF009H21+           GAAGAGTTTCTGGAATCCTTCCGAACCAGGATTTATAATTCCAGCAACGGAAGGAGTTTC
                      ____________________________________________________________
consensus             GAAGAGTTTCTGGAATCCTTCCGAACCAGGATTTATAATTCCAGCAACGGAAGGAGTTTC
 
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JMSF028D12+           CCTCCCACAAAGGAAATCAAAATCAAGCATCCGTTGGATGGGAAGTTGTTTGTAGTTGTA
JMSF009H21+           CCTCCCACAAAGGAAATCAAAATCAAGCATCCGTTGGATGGGAAGTTGTTTGTAGTTGTA
                      ____________________________________________________________
consensus             CCTCCCACAAAGGAAATCAAAATCAAGCATCCGTTGGATGGGAAGTTGTTTGTAGTTGTA
 
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JMSF028D12+           GAACAAGGCTTGAGTAGTCTTGGAGAAAAGTTGTCCAGTTGCCATGGTGCCCATTCAATC
JMSF009H21+           GAACAAGGCTTGAGTAGTCTTGGAGAAAAGTTGTCCAGTTGCCATGGTGCCCATTCAATC
                      ____________________________________________________________
consensus             GAACAAGGCTTGAGTAGTCTTGGAGAAAAGTTGTCCAGTTGCCATGGTGCCCATTCAATC
 
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JMSF028D12+           CACAGCTGAGCTT                                               
JMSF009H21+           CACAGCTGAGCTTTGAAATGAAACGAATCGCCTCTTAAGCGCAGACAATGTGAGTGGAAA
                      ____________________________________________________________
consensus             CACAGCTGAGCTTTGAAATGAAACGAATCGCCTCTTAAGCGCAGACAATGTGAGTGGAAA
 
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JMSF009H21+           GAGGGAGAAGAATGATTGATATACAATAGCCTCAATATTCAATAGGGGAGGAGCAGCATC
                      ____________________________________________________________
consensus             GAGGGAGAAGAATGATTGATATACAATAGCCTCAATATTCAATAGGGGAGGAGCAGCATC