Contig 009221:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF009G03Sequence367009221 (2)ref|XP_010325672.1|5e-19PREDICTED: protein NRT1/ PTR FAMILY 7.3-like [Solanum lycopersicum]831022459
JMSF020P24Sequence673009221 (2)ref|XP_009792173.1|5e-97PREDICTED: protein NRT1/ PTR FAMILY 7.2-like [Nicotiana sylvestris]758011314 (3)ref|XP_009792173.1|8e-09PREDICTED: protein NRT1/ PTR FAMILY 7.2-like [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF020P24+                                                           CAATATGGGTTT
                      ____________________________________________________________
consensus                                                             CAATATGGGTTT
 
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JMSF020P24+           GCACCATATTGGCATCCATAGTGTTTGTTCAGGTTTTTTCTCTCTTTGTGGAGCAAGGAG
                      ____________________________________________________________
consensus             GCACCATATTGGCATCCATAGTGTTTGTTCAGGTTTTTTCTCTCTTTGTGGAGCAAGGAG
 
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JMSF020P24+           CTGCCATGAATACCAGGATTGCAGACTTCCATATGCCTCCGGCTAGTATGGCCTCGGTTG
                      ____________________________________________________________
consensus             CTGCCATGAATACCAGGATTGCAGACTTCCATATGCCTCCGGCTAGTATGGCCTCGGTTG
 
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JMSF020P24+           ACATTATAAGCTCATCTGCCTTCATCATTTGCTATGAGAACATCATACTTCCTCTATATG
                      ____________________________________________________________
consensus             ACATTATAAGCTCATCTGCCTTCATCATTTGCTATGAGAACATCATACTTCCTCTATATG
 
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JMSF020P24+           TCAAATTGATGAAAAGAGAACCAAAGCCTCCCAATGAGCTGCAGAGAATAGGAATAGGGA
                      ____________________________________________________________
consensus             TCAAATTGATGAAAAGAGAACCAAAGCCTCCCAATGAGCTGCAGAGAATAGGAATAGGGA
 
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JMSF020P24+           TGATCATTTCAATAATAACCATGTTGATAGCAGGCCTGGTTGAGCAACACAGACTAAGAT
                      ____________________________________________________________
consensus             TGATCATTTCAATAATAACCATGTTGATAGCAGGCCTGGTTGAGCAACACAGACTAAGAT
 
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JMSF020P24+           ATGCTAATAGGAAAGAAGAGACAAGTTCTCTGAGCATTTTCTGGCAGATTCCTCAGTATG
                      ____________________________________________________________
consensus             ATGCTAATAGGAAAGAAGAGACAAGTTCTCTGAGCATTTTCTGGCAGATTCCTCAGTATG
 
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JMSF020P24+           TGCTTGTAGGAGTATCTGAAGCATTTGTATATGTAGCTCAGTGGGAATTCTTTGCATCAC
                      ____________________________________________________________
consensus             TGCTTGTAGGAGTATCTGAAGCATTTGTATATGTAGCTCAGTGGGAATTCTTTGCATCAC
 
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JMSF020P24+           AGGTACCTGATAGTCTGAAGAGCGTCGGGCTCGGTTTATCCATGTCCTCATCAGCCTTAG
JMSF009G03+                                                                GCCTTAG
                      ____________________________________________________________
consensus             AGGTACCTGATAGTCTGAAGAGCGTCGGGCTCGGTTTATCCATGTCCTCATCAGCCTTAG
 
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JMSF020P24+           GCAGTTACCTGTGCAGCATTATACTAAGCATAGTAATGAAGATCACAACCAAACACGGGA
JMSF009G03+           GCAGTTACCTGTGCAGCATTATACTAAGCATCGTAATGAAGATCACAACCAAACATGGGA
                      ____________________________________________________________
consensus             GCAGTTACCTGTGCAGCATTATACTAAGCATCGTAATGAAGATCACAACCAAACATGGGA
 
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JMSF020P24+           ATCCAGGTTGGGTACCACCAAATTTAAACGACGGCCACCTCGATAGATTTTTCTTCCTG 
JMSF009G03+           AGCCAGGTTGGGTACCACCAAATTTAAACGACGGCCACCTCGATAGATTTTTCTTCCTGT
                      ____________________________________________________________
consensus             ATCCAGGTTGGGTACCACCAAATTTAAACGACGGCCACCTCGATAGATTTTTCTTCCTGT
 
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JMSF009G03+           CAGAACAACAGCATGTGAATGTGATTTTTCAGCCATTTTAGAATCAACTCCTCCATATTT
                      ____________________________________________________________
consensus             CAGAACAACAGCATGTGAATGTGATTTTTCAGCCATTTTAGAATCAACTCCTCCATATTT
 
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JMSF009G03+           AGCAAAACGCACATTATTTCACCATTTCTGTTCACATGGATAATGAACTTGCAACAGCAG
                      ____________________________________________________________
consensus             AGCAAAACGCACATTATTTCACCATTTCTGTTCACATGGATAATGAACTTGCAACAGCAG
 
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JMSF009G03+           CAGTTTCACCACCGCTAGTTTCAAATTGGTTCTGCGTCTGCAACATTGCGGGATTGAAAT
                      ____________________________________________________________
consensus             CAGTTTCACCACCGCTAGTTTCAAATTGGTTCTGCGTCTGCAACATTGCGGGATTGAAAT
 
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JMSF009G03+           TTGACGAAGAAAGAGCTGATGAAAGTTGAGTTGAGAGAGAATTGAGAGTAAAGATAGTCC
                      ____________________________________________________________
consensus             TTGACGAAGAAAGAGCTGATGAAAGTTGAGTTGAGAGAGAATTGAGAGTAAAGATAGTCC