Contig 009216:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN042K18Sequence627009216 (4)ref|XP_009385938.1|3e-80PREDICTED: ATP synthase subunit delta', mitochondrial-like [Musa acuminata subs
JMSF008K23Sequence336009216 (4)ref|XP_009390524.1|1e-12PREDICTED: ATP synthase subunit delta', mitochondrial-like [Musa acuminata subs728009216 (4)ref|XP_009400218.1|1e-97PREDICTED: ATP synthase subunit delta', mitochondrial [Musa acuminata subsp. ma
JMSF026J08Sequence713018928ref|XP_009629715.1|4e-68PREDICTED: ABC transporter A family member 11-like [Nicotiana tomentosiformis]740009216 (4)ref|XP_009400218.1|3e-101PREDICTED: ATP synthase subunit delta', mitochondrial [Musa acuminata subsp. ma

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF008K23-                                           TCTCATCACAAGAGCATTTGCCAGGTT
rJMSF026J08-                                           TCTCATCACAAGAGCATTTGCCA-GTT
                      ____________________________________________________________
consensus                                              TCTCATCACAAGAGCATTTGCCAGGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF008K23-          GCCACTCGGTTTTTCCCAAGGGGCGTGTCATAATTGTTTCAAGAATGACTTGTCATTCCA
rJMSF026J08-          GCCACTCGGTTTTTCCCAAGGGGCGTGTCATAATTGTTTCAAGAATGACTTGTCATTCCA
                      ____________________________________________________________
consensus             GCCACTCGGTTTTTCCCAAGGGGCGTGTCATAATTGTTTCAAGAATGACTTGTCATTCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF008K23-          TTATCCAACAGAGAAAATATAAAAATCGAAGTACTAGATTAAGGGATGGAATTGGAAGAT
rJMSF026J08-          TTATCCAACAGAGAAAATATAAAAATCGAAGTACTAGATTAAGGGATGGAATTGGAAGAT
                      ____________________________________________________________
consensus             TTATCCAACAGAGAAAATATAAAAATCGAAGTACTAGATTAAGGGATGGAATTGGAAGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF008K23-          TTAATGAGGCATGTCGAGATAGACAAAAGGGGAGATAATTATTGAACCGAGCAGAAGAGA
rJMSF026J08-          TTAATGAGGCATGTCGAGATAGACAAAAGGGGAGATAATTATTGAACCGAGCAGAAGAGA
                      ____________________________________________________________
consensus             TTAATGAGGCATGTCGAGATAGACAAAAGGGGAGATAATTATTGAACCGAGCAGAAGAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF008K23-          AAGCCACACCTAGCCTGTAAGAGCAGAATTAAGAGCACTGAGCACATCCACCCCAATTTG
rJMSF026J08-          AAGCCACACCTAGCCTGTAAGAGCAGAATTAAGAGCACTGTGCACATCCACCCCAATTTG
                      ____________________________________________________________
consensus             AAGCCACACCTAGCCTGTAAGAGCAGAATTAAGAGCACTGTGCACATCCACCCCAATTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF008K23-          TGCTTCAGCTTTCTGCAAATCAGTAGATGCAGAGTTGAGCTTTTGTGTGAACTCTGCCAA
rJMSF026J08-          TGCTTCAGCTTTCTGCAAATCAGTAGATGCAGAGTTGAGCTTTTGTGTGAACTCTGCCAA
                      ____________________________________________________________
consensus             TGCTTCAGCTTTCTGCAAATCAGTAGATGCAGAGTTGAGCTTTTGTGTGAACTCTGCCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF008K23-          CCCCTTCTGCACAGCGCTTGGATCAATTTGTTCAACGGGAATTGCCTCGATAGCCATTAT
rJMSF026J08-          CCCCTTCTGCACAGCGCTTGGATCAATTTGTTCAACGGGAATTGCCTCGATAGCCATTAT
JMFN042K18+                      CAGCGCTTGGATCAATTTGTTCAACGGGAATTGCCTCGATAGCCATTAT
                      ____________________________________________________________
consensus             CCCCTTCTGCACAGCGCTTGGATCAATTTGTTCAACGGGAATTGCCTCGATAGCCATTAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF008K23-          GTCAGCAATCGAGTTTGAATGGACAAACGCAAATCCACTGCTAACAAAATATTTCTTCAC
rJMSF026J08-          GTCAGCAATCGAGTTTGAATGGACAAACGCAAATCCACTGCTAACAAAATATTTCTTCAC
JMFN042K18+           GTCAGCAATCGAGTTTGAATGGACAAACGCAAATCCACTGCTAACAAAATATTTCTTCAC
                      ____________________________________________________________
consensus             GTCAGCAATCGAGTTTGAATGGACAAACGCAAATCCACTGCTAACAAAATATTTCTTCAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF008K23-          ATCATTCCCTTCATGCACAGACACGACACCAGGCTTTAGCTCAGCAATTGTTGCGACATG
rJMSF026J08-          ATCATTCCCTTCATGCACAGACACGACACCAGGCTTTAGCTCAGCAATTGTTGCGACATG
JMFN042K18+           ATCATTCCCTTCATGCACAGACACGACACCAGGCTTTAGCTCAGCAATTGTTGCGACATG
                      ____________________________________________________________
consensus             ATCATTCCCTTCATGCACAGACACGACACCAGGCTTTAGCTCAGCAATTGTTGCGACATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF008K23-          CCCAGGAAGAATACCCATCTGTCCGGTCGTTGCTGGTACTATAACCATGTCAACCTCTTT
rJMSF026J08-          CCCAGGAAGAATACCCATCTGTCCGGTCGTTGCTGGTACTATAACCATGTCAACCTCTTT
JMFN042K18+           CCCAGGAAGAATACCCATCTGTCCGGTCGTTGCTGGTACTATAACCATGTCAACCTCTTT
                      ____________________________________________________________
consensus             CCCAGGAAGAATACCCATCTGTCCGGTCGTTGCTGGTACTATAACCATGTCAACCTCTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF008K23-          GTTGGAGAACTCGGAAGCATAGGGCAAAACGAAGTTGATTTTGAGCTTGGAGGGGATAGA
rJMSF026J08-          GTTGGAGAACTCGGAAGCATAGGGCAAAACGAAGTTGATTTTGAGCTTGGAGGGGATAGA
JMFN042K18+           GTTGGAGAACTCGGAAGCATAGGGCAAAACGAAGTTGATTTTGAGCTTGGAGGGGATAGA
                      ____________________________________________________________
consensus             GTTGGAGAACTCGGAAGCATAGGGCAAAACGAAGTTGATTTTGAGCTTGGAGGGGATAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF008K23-          TGAAGGGGTAGGCGGGCGAGGTTGCATGAAGGAGAGAGGGGTCTTGGGTGGGTCAATGTT
rJMSF026J08-          TGAAGGGGTAGGCGGGCGAGGTTGCATGAAGGAGAGAGGGGTCTTGGGTGGGTCAATGTT
JMFN042K18+           TGAAGGGGTAGGCGGGCGAGGTTGCATGAAGGAGAGAGGGGTCTTGGGTGGGTCAATGTT
JMSF008K23+                                   CATGAAGGAGAGAGGGGTCTTGGGTGGGTCAATGTT
                      ____________________________________________________________
consensus             TGAAGGGGTAGGCGGGCGAGGTTGCATGAAGGAGAGAGGGGTCTTGGGTGGGTCAATGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF008K23-          AGGAACCGTCCTCCTCCAGGCGGACACGAAGGCCTCATCGG                   
rJMSF026J08-          AGGAACCGTCCTCCTCCAGGCGGACACGAAGGCCTCATCGGCGGACGGCGCGGA      
JMFN042K18+           AGGAACCGTCCTCCTCCAGGCGGACACGAAGGCCTCATCGGCGGACGGCGCGGAGGCGAG
JMSF008K23+           AGGAACCGTCCTCCTCCAGGCGGACACGAAGGCCTCATCGGCGGACGGCGCGGAGGCGAG
                      ____________________________________________________________
consensus             AGGAACCGTCCTCCTCCAGGCGGACACGAAGGCCTCATCGGCGGACGGCGCGGAGGCGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN042K18+           ATCAGTGGAGAATCGTCGCGATCCTCCGGCGACGGGGGATGCCGATCGGTTCAACAAGCG
JMSF008K23+           ATCAGTGGAGAATCGTCGCGATCCTCCGGCGACGGGGGATGCCGATCGGTTCAACAAGCG
                      ____________________________________________________________
consensus             ATCAGTGGAGAATCGTCGCGATCCTCCGGCGACGGGGGATGCCGATCGGTTCAACAAGCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN042K18+           AGTGGCGGCGTAACGGAACATGGTGGCACCAAAATCGGAGATCGCTCGGCTCGCAAGTCG
JMSF008K23+           AGTGGCGGCGTAACGGAACATGGTGGCACCAAAATCGGAGATCGCTCGGCTCGCAAGTCG
                      ____________________________________________________________
consensus             AGTGGCGGCGTAACGGAACATGGTGGCACCAAAATCGGAGATCGCTCGGCTCGCAAGTCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN042K18+           GAGAAATGGGAAAGCAAATAGGCTGCTGTCTCAGGCAATCATAAGAGGCGTTCGCCGGAT
JMSF008K23+           GAGAAATGGGAAAGCAAATAGGCTGCTGTCTCAGGCAATCATAAGAGGCGTTCGCCGGAT
                      ____________________________________________________________
consensus             GAGAAATGGGAAAGCAAATAGGCTGCTGTCTCAGGCAATCATAAGAGGCGTTCGCCGGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN042K18+           ACGGGTTTCTCTATTTCTCTCTCGCCATAAAGGTTTCG                      
JMSF008K23+           ACGGGTTTCTCTATTTCTCTCTCGCCATAAAGGTTTCGTTTTTGCGCTATCGCATTCTTC
                      ____________________________________________________________
consensus             ACGGGTTTCTCTATTTCTCTCTCGCCATAAAGGTTTCGTTTTTGCGCTATCGCATTCTTC