Contig 009215:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS117A11Sequence606009215 (2)emb|CDP03391.1|4e-05unnamed protein product [Coffea canephora]
JMSF008K13Sequence393009215 (2)737020299gb|KGN65399.1|7e-128hypothetical protein Csa_1G408710 [Cucumis sativus]

Alignment

This contig is upended


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JMFS117A11+                     AGCCAGGCCTAGTGGGAAAGAAAGCCTCCGGTCAGACGAAGAAGAAGGGG
                      ____________________________________________________________
consensus                       AGCCAGGCCTAGTGGGAAAGAAAGCCTCCGGTCAGACGAAGAAGAAGGGG
 
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JMFS117A11+           GATTATTATTATTACCACCTATCTCCAACATCTTTTCCATTTGTACCCCTTTCCCTTTCC
                      ____________________________________________________________
consensus             GATTATTATTATTACCACCTATCTCCAACATCTTTTCCATTTGTACCCCTTTCCCTTTCC
 
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JMFS117A11+           TCCTTCCCCTTCTCCTCTTGGCTTCTTCTTCACCATCGCATCTCGACAAGATTCGAGACA
                      ____________________________________________________________
consensus             TCCTTCCCCTTCTCCTCTTGGCTTCTTCTTCACCATCGCATCTCGACAAGATTCGAGACA
 
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JMFS117A11+           CAGAATTCTGATTCCTCGACTCCTGCAATGGAGTTCTGGAGATCACATGCTTTTCCTCAG
                      ____________________________________________________________
consensus             CAGAATTCTGATTCCTCGACTCCTGCAATGGAGTTCTGGAGATCACATGCTTTTCCTCAG
 
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JMFS117A11+           GCTCTTTCATCTGCCACTGAGGCATTTCCTATGATCTTGTGAATCTCTGATCTGATGTGC
JMSF008K13+                                      CCTATGATCTTGTGAATCTCTGATCTGATGTGC
                      ____________________________________________________________
consensus             GCTCTTTCATCTGCCACTGAGGCATTTCCTATGATCTTGTGAATCTCTGATCTGATGTGC
 
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JMFS117A11+           CCTTGTGAATTACGTAATCTTTAGCTTGTGATCCTTTGCGAACCAACTTGAATGCTATGT
JMSF008K13+           CCTTGTGAATTACGTAATCTTTAGCTTGTGATCCTTTGCGAACCAACTTGAATGCTATGT
                      ____________________________________________________________
consensus             CCTTGTGAATTACGTAATCTTTAGCTTGTGATCCTTTGCGAACCAACTTGAATGCTATGT
 
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JMFS117A11+           TTCTTCCCTGACGATCATTAACTGAAGCTCAGCAGCC------CCATCATCACATCATCA
JMSF008K13+           TTCTTCCCTGACGATCATTAACTGAAGCTCAGCAGCCCTGTCTCCATCATCACATCATCA
                      ____________________________________________________________
consensus             TTCTTCCCTGACGATCATTAACTGAAGCTCAGCAGCCCTGTCTCCATCATCACATCATCA
 
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JMFS117A11+           GACTCAGTGCTCTTCTTTTTGCAGCTCGGATAGATGGGATCTGAATCTTTATATATTGCG
JMSF008K13+           GACTCAGTGCTCTTCTTTTTGCAGCTCGGATAGATGGGATCTGAATCTTTATATATTGCG
                      ____________________________________________________________
consensus             GACTCAGTGCTCTTCTTTTTGCAGCTCGGATAGATGGGATCTGAATCTTTATATATTGCG
 
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JMFS117A11+           TTCAGATTGCATGAGTTGTTTATTCGCCGGAAGAGCTGTCGGAAAATTTTGTGAGTGGTG
JMSF008K13+           TTCAGATTGCATGAGTTGTTTATTCGCCGGAAGAGCTGTCGGAAAATTTTGTGAGTGGTG
                      ____________________________________________________________
consensus             TTCAGATTGCATGAGTTGTTTATTCGCCGGAAGAGCTGTCGGAAAATTTTGTGAGTGGTG
 
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JMFS117A11+           GAGGGTTGGTGGCCTGGGCCGCTGCGCTGCGGGTAGTTGATTTTTTTGACTGTTAGAA-C
JMSF008K13+           GAGGGTTGGTGGCCTGGGCCGCTGCGCTGCGGGTAGTTGATTTTTTTGACTGTTAGAANC
                      ____________________________________________________________
consensus             GAGGGTTGGTGGCCTGGGCCGCTGCGCTGCGGGTAGTTGATTTTTTTGACTGTTAGAANC
 
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JMFS117A11+           TAAGTGATAAGGTGTATGGGAAG                                     
JMSF008K13+           TAAGTGATAAGGTGTATGGGAAGTGATCAAAGTAATGGTTGTGTGTTTTTGCCAGGACGC
                      ____________________________________________________________
consensus             TAAGTGATAAGGTGTATGGGAAGTGATCAAAGTAATGGTTGTGTGTTTTTGCCAGGACGC