Contig 009203:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS158B06Sequence421009203 (3)
JMSF007G03Sequence283009203 (3)700001422 (3)ref|XP_011076637.1|285PREDICTED: uncharacterized protein LOC105160836 [Sesamum indicum]
JMSF016B20Sequence260009203 (3)805001422 (3)ref|XP_009759205.1|348PREDICTED: uncharacterized protein LOC104211781, partial [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFS158B06+                                                       TCTCCGCTTGAGCAGG
                      ____________________________________________________________
consensus                                                         TCTCCGCTTGAGCAGG
 
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JMFS158B06+           CGCCGGATCTAGAACCTCCGTCGCCGTCGCCGTGGCGGGGGCGCTCTCCGGGGGATCATC
                      ____________________________________________________________
consensus             CGCCGGATCTAGAACCTCCGTCGCCGTCGCCGTGGCGGGGGCGCTCTCCGGGGGATCATC
 
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JMFS158B06+           GTCGGCTCTCGCCACTGCCGTCCGGAGCACGCTAGCTCCGAGGGCGATTAATGAGGTGAC
                      ____________________________________________________________
consensus             GTCGGCTCTCGCCACTGCCGTCCGGAGCACGCTAGCTCCGAGGGCGATTAATGAGGTGAC
 
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JMSF016B20+                            TCGTGCCGCGAACGGCGCCGCCATTCTCGGCCGGGATTTGACC
JMFS158B06+           GAGCACTTCTCGCCTCTTCGTGCCGCGAACGGCGCCGCCATTCTCGGCCGGGATTTGACC
JMSF007G03+                            TCGTGCCGCGAACGGCGCCGCCATTCTCGGCCGGGATTTGACC
                      ____________________________________________________________
consensus             GAGCACTTCTCGCCTCTTCGTGCCGCGAACGGCGCCGCCATTCTCGGCCGGGATTTGACC
 
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JMSF016B20+           GCAGCGGACGGAGAAGCTGAGGTGGCACGGGAACTTTCGCCGGCGACGATTTCCCACCAC
JMFS158B06+           GCAGCGGACGGAGAAGCTGAGGTGGCACGGCAACTTTCGCCGGCGACGATTTCCCACCAC
JMSF007G03+           GCAGCGGACGGAGAAGCTGAGGTGGCACGGGAACTTTCGCCGGCGACGATTTCCCACCAC
                      ____________________________________________________________
consensus             GCAGCGGACGGAGAAGCTGAGGTGGCACGGGAACTTTCGCCGGCGACGATTTCCCACCAC
 
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JMSF016B20+           GAGACGGCGGTTGACGTGGAGTGATCTGAAAGTAAAGCCACGTAGAACGTGGCACTCCAT
JMFS158B06+           GAGACGGCGGTTGACGTGGAGTGATCTGAAAGTAAAGCCACGTAGAACGTGGCACTCCAT
JMSF007G03+           GAGACGGCGGTTGACGTGGAGTGATCTGAAAGTAAAGCCACGTAGAACGTGGCACTCCAT
                      ____________________________________________________________
consensus             GAGACGGCGGTTGACGTGGAGTGATCTGAAAGTAAAGCCACGTAGAACGTGGCACTCCAT
 
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JMSF016B20+           TTCCAGATTCGGGTGAGATGAGAAGAGGTGATTGGAGAGCAGTAGCAGTAGCGCTACATG
JMFS158B06+           TTCCAGATTCGGGTGAGATGAGAAGAGGTGATTGGAGAGCAGTAGCAGTAGCGCTACATG
JMSF007G03+           TTCCAGATTCGGGTGAGATGAGAAGAGGTGATTGGAGAGCAGTAGCAGTAGCGCTACATG
                      ____________________________________________________________
consensus             TTCCAGATTCGGGTGAGATGAGAAGAGGTGATTGGAGAGCAGTAGCAGTAGCGCTACATG
 
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JMSF016B20+           GTCAGCGCCGACGACCAATCCATCTTCAATCT                            
JMFS158B06+           GTCAGCGCCCACGACCAATCCATCTTCAATCTTAGCCTTCAAAAT               
JMSF007G03+           GTCAGCGCCGACGACCAATCCATCTTCAATCTTAGCCTTCAAAATTTTCTGAACAAAGCC
                      ____________________________________________________________
consensus             GTCAGCGCCGACGACCAATCCATCTTCAATCTTAGCCTTCAAAATTTTCTGAACAAAGCC