Contig 009201:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF007C19Sequence366009201 (6)ref|XP_003629705.1|6e-09hypothetical protein MTR_8g085620 [Medicago truncatula] gb|AET04181.1| lipase/li764009897 (6)
JMSF013F19Sequence235008932 (6)gb|ABK96760.1|3e-06unknown [Populus trichocarpa x Populus deltoides]757009201 (6)
JMSF015P09Sequence335009201 (6)emb|CDP20466.1|2e-08unnamed protein product [Coffea canephora]777018169
JMSF025C24Sequence635009201 (6)emb|CDP20466.1|3e-10unnamed protein product [Coffea canephora]743018220gb|KGN66554.1|5e-19hypothetical protein Csa_1G629110 [Cucumis sativus]
JMSF026B12Sequence691009201 (6)emb|CDP20466.1|3e-10unnamed protein product [Coffea canephora]782020403emb|CDP20466.1|5e-10unnamed protein product [Coffea canephora]
JMSF041K06Sequence675009201 (6)emb|CDP20466.1|9e-09unnamed protein product [Coffea canephora]666009897 (6)gb|KDO70538.1|2e-04hypothetical protein CISIN_1g0106562mg, partial [Citrus sinensis]

Alignment

This contig is upended


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rJMSF013F19-                             TCCTTGGTATAATGCCAACAGATTATACCTCCNTCTCACAT
                      ____________________________________________________________
consensus                                TCCTTGGTATAATGCCAACAGATTATACCTCCNTCTCACAT
 
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rJMSF013F19-          ACTATGCTAAGGTAATGAATTAGTCNCAAAACTGCNACCACTCAGAAGCAAACATTACAG
                      ____________________________________________________________
consensus             ACTATGCTAAGGTAATGAATTAGTCNCAAAACTGCNACCACTCAGAAGCAAACATTACAG
 
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rJMSF013F19-          TACACTCAATCAAAAATATGAAACTGTTAGTTGCATCTATCATCACGAACTAAAACCTAA
                      ____________________________________________________________
consensus             TACACTCAATCAAAAATATGAAACTGTTAGTTGCATCTATCATCACGAACTAAAACCTAA
 
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rJMSF013F19-          GATAACAGCCACCCAGTGACGAAGCTTCAATTCAGACTCTCATCTTTCCACGGATACCCA
                      ____________________________________________________________
consensus             GATAACAGCCACCCAGTGACGAAGCTTCAATTCAGACTCTCATCTTTCCACGGATACCCA
 
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rJMSF013F19-          ATATTATATTTCTCTCTATGAATCCAATTAAACCGAGGAGATTAACTTTCTCCTAAACCG
                      ____________________________________________________________
consensus             ATATTATATTTCTCTCTATGAATCCAATTAAACCGAGGAGATTAACTTTCTCCTAAACCG
 
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rJMSF013F19-          CAACACCCAATCCCTAACCGAATTAATTATACACAACTATATATGAAGCGATTAATTGAG
                      ____________________________________________________________
consensus             CAACACCCAATCCCTAACCGAATTAATTATACACAACTATATATGAAGCGATTAATTGAG
 
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rJMSF013F19-          ATGCTAATCTTCTTCCAAACAGAATATAAATGCTAATCAACTGAGGAATTGAAGAAATTG
                      ____________________________________________________________
consensus             ATGCTAATCTTCTTCCAAACAGAATATAAATGCTAATCAACTGAGGAATTGAAGAAATTG
 
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rJMSF013F19-          CAACTAACTGACCTCGATATGATAATGAATCAATAACTGTTTATCAAACCATCAGCTTCG
JMSF025C24+                                   ATGAATCAATAACTGTTGATCAAACCATCAGCTTCG
JMSF026B12+                                   ATGAATCAATAACTGTTGATCAAACCATCAGCTTCG
                      ____________________________________________________________
consensus             CAACTAACTGACCTCGATATGATAATGAATCAATAACTGTTGATCAAACCATCAGCTTCG
 
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rJMSF013F19-          GAATTTCATTAAACCCTTATTGCTTCCATTTGCGCTAGTCTGATAGATAGTCTCAG    
JMSF025C24+           GAATTCCATTAAACCCTTATTGCTTCCATTTGCGCTAGTCTGATAGATAGTCTCAGACTC
JMSF026B12+           GAATTCCATTAAACCCTTATTGCTTCCATTTGCGCTAGTCTGATAGATAGTCTCAGACTC
                      ____________________________________________________________
consensus             GAATTCCATTAAACCCTTATTGCTTCCATTTGCGCTAGTCTGATAGATAGTCTCAGACTC
 
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JMSF025C24+           TCAGTTCAACAACCAAAACTTCAGAAATTAAATTTCCCACATCGGGCAGCTATTAAACTT
JMSF015P09+                                  GAAATTAAATGTCCCACATTGGAAAACTATAAAAATG
JMSF026B12+           TCAGTTCAACAACCAAAACTTCAGAAATTAAATTTCCCACATCGGGCAGCTATTAAACTT
JMSF041K06+                                             TCCCACACCGGCCAACTATGAAACTG
                      ____________________________________________________________
consensus             TCAGTTCAACAACCAAAACTTCAGAAATTAAATTTCCCACATCGGGCAGCTATTAAACTT
 
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JMSF025C24+           GAAATCAAAATATAAGGTTCTATTTGCGAGAGTTAGTCACGACCTTACTTGAACAGGATC
JMSF015P09+           GAAACCAAAATATAAGGTTCCATTTGTGAGAGTTGGTCACGATNTTACTTGAACNGGATC
JMSF026B12+           GAAATCAAAATATAAGGTTCTATTTGCGAGAGTTAGTCACGACCTTACTTGAACAGGATC
JMSF041K06+           GAAACCAAAATATAAGGTTCAATTTGTGAAACTTGGTCACGACCATACTTGAACAGGATC
                      ____________________________________________________________
consensus             GAAATCAAAATATAAGGTTCTATTTGTGAGAGTTGGTCACGACCTTACTTGAACAGGATC
 
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JMSF025C24+           TGTTCTATAGGCTCGTACCTCTGTATCCTTGAGTTCTAAGGAGACAGGAAACTAAGCCTG
JMSF015P09+           TGTTCTATAGATTCGTACCTCTGTATCCNTGAGTTNTAAGGNGACAGGAAACTAAGCCTG
JMSF026B12+           TGTTCTATAGGCTCGTACCTCTGTATCCTTGAGTTCTAAGGAGACAGGAAACTAAGCCTG
JMSF041K06+           TGTTCTGTAGGCTTGTACCTCTGTATCCTTGAGTTCAAAGGAGACAGGAAACTAAGCCTG
                      ____________________________________________________________
consensus             TGTTCTATAGGCTCGTACCTCTGTATCCTTGAGTTCTAAGGAGACAGGAAACTAAGCCTG
 
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JMSF025C24+           GTGGATGAATCATGGCCAAGGGGCTAGAGCGTGAGTAACAGCACCGTACCTTCACCGGGC
JMSF015P09+           GTGGATGAGATATGGCCNGGAGGCTAGAGCGTGAATAACGGCNCCGTACCTTCGCCGGGC
JMSF026B12+           GTGGATGAATCATGGCCAAGGGGCTAGAGCGTGAGTAACAGCACCGTACCTTCACCGGGC
JMSF041K06+           GTGGATGAGATATGGCCAAGAAGCTAGAGCGTGAGTAACAGGACCGTACCTTCGCCAGGC
JMSF007C19+                                                                    GGC
                      ____________________________________________________________
consensus             GTGGATGAGTTATGGCCAAGGGGCTAGAGCGTGAGTAACAGCACCGTACCTTCGCCGGGC
 
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JMSF025C24+           GGAGCCGTCGAGGATCGTTCCTGGCCGCCTAGCCGCGGCTGGGATGGCCTCTTGTCTGTC
JMSF015P09+           GGAGCTGTAGAGGATCGTTCCCGGCCGTCTAGCCGCGGCTGGGATGGCCTNTTGGTTGTN
JMSF026B12+           GGAGCCGTCGAGGATCGTTCCTGGCCGCCTAGCCGCGGCTGGGATGGCCTCTTGTCTGTC
JMSF041K06+           GGAGCTGTTGAGGATCGTTCCCGGCCGTCTAGCCGCGGCTGGGATGGCCTCTTGGCTGTC
JMSF007C19+           GGAGCTGTTGAGGATCGTTCCCGGCCGTCTAGCCGCGGCTGGGATGGCCTCTTGGCTGTC
                      ____________________________________________________________
consensus             GGAGCTGTTGAGGATCGTTCCCGGCCGTCTAGCCGCGGCTGGGATGGCCTCTTGGCTGTC
 
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JMSF025C24+           TGACAGGCTTCCCTTCTTTTT                                       
JMSF015P09+           TGACAGGCTTCCCATCTTTTT                                       
JMSF026B12+           TGACAGGCTTCCCTTCTTTTT                                       
JMSF041K06+           TGACAGGCTTCCCATCTTTTTGTTTTTCCCCCTTTTTTCAATTTTCATTGGTGGCTTCTT
JMSF007C19+           TGACAGGCTTCCCATCTTTTTGTTTTTCCCCCTTTTTTCAATTTTCATTGGTGGCTTCTT
                      ____________________________________________________________
consensus             TGACAGGCTTCCCATCTTTTTGTTTTTCCCCCTTTTTTCAATTTTCATTGGTGGCTTCTT
 
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JMSF041K06+           CGGTTCTTCCTAAAATGGAGCTGCAGAACAGTAGAACACTATGAAAGTTCTACGTTCTCG
JMSF007C19+           CGGTTCTTCCTAAAATGGAGCTGCAGAACAGTAGAACACTATGAAAGTTCTACGTTCTCG
                      ____________________________________________________________
consensus             CGGTTCTTCCTAAAATGGAGCTGCAGAACAGTAGAACACTATGAAAGTTCTACGTTCTCG
 
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JMSF041K06+           GGATCTTTAAAGTGATGCATTAATCTATGAACAAGAAGCGTTTGTAGTCCAACGGTTAGG
JMSF007C19+           GGATCTTTAAAGTGATGCATTAATCTATGAACAAGAAGCGTTTGTAGTCCAACGGTTAGG
                      ____________________________________________________________
consensus             GGATCTTTAAAGTGATGCATTAATCTATGAACAAGAAGCGTTTGTAGTCCAACGGTTAGG
 
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JMSF041K06+           ATAATTGCCTTCCAAGCAATAGACCCGGGTTTGACTCCCG                    
JMSF007C19+           ATAATTGCCTTCCAAGCAATAGACCCGGGTTTGACTCCCGGCAAACGCATTACTTTCCCT
                      ____________________________________________________________
consensus             ATAATTGCCTTCCAAGCAATAGACCCGGGTTTGACTCCCGGCAAACGCATTACTTTCCCT
 
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JMSF007C19+           CTTTTGTTCAATAATGAAGGGAGCGGAAGCAGAGTCATGAATTGTCTTGCACGCAGAGTC
                      ____________________________________________________________
consensus             CTTTTGTTCAATAATGAAGGGAGCGGAAGCAGAGTCATGAATTGTCTTGCACGCAGAGTC