Contig 009200:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS055A06Sequence588009200 (5)ref|XP_006347153.1|6e-41PREDICTED: uncharacterized protein LOC102600140 isoform X1 [Solanum tuberosum]
JMFS091C08Sequence578009200 (5)ref|XP_006347153.1|2e-40PREDICTED: uncharacterized protein LOC102600140 isoform X1 [Solanum tuberosum]
JMFS129G11Sequence626009200 (5)ref|XP_006347154.1|4e-46PREDICTED: uncharacterized protein LOC102600140 isoform X2 [Solanum tuberosum]
JMSF006P11Sequence268009200 (5)
JMSF047I06Sequence652009200 (5)ref|XP_009757897.1|3e-52PREDICTED: lysine-specific demethylase JMJ25 [Nicotiana sylvestris] ref|XP_00975

Alignment

This contig is upended


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JMSF047I06+                                                     TTNTTTGACCTAAACTGC
                      ____________________________________________________________
consensus                                                       TTNTTTGACCTAAACTGC
 
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JMSF047I06+           CTGGCCGAGAAGGGACTCAAGCTCAAATCCGCCCCCAATTTGATGCCCGAGATGAAACCG
                      ____________________________________________________________
consensus             CTGGCCGAGAAGGGACTCAAGCTCAAATCCGCCCCCAATTTGATGCCCGAGATGAAACCG
 
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JMSF047I06+           CCATTGTTGAGGTTATTAGAAGGTAAATTGGGGATAGCCATTACAGCATTGGGGAATTCA
                      ____________________________________________________________
consensus             CCATTGTTGAGGTTATTAGAAGGTAAATTGGGGATAGCCATTACAGCATTGGGGAATTCA
 
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JMSF047I06+           CGCATTGATGNTGCGTCGCTATCATTCTTGAGCTCCTTCTGTTTCTTNTTCTCCACCGGG
JMFS129G11+                                 CATTCTTGAGCTCCTTCTGTTTCTTCTTCTCCACCTGG
                      ____________________________________________________________
consensus             CGCATTGATGNTGCGTCGCTATCATTCTTGAGCTCCTTCTGTTTCTTCTTCTCCACCTGG
 
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JMSF047I06+           CGTTTCAAGAACACCCGGATGAGCTCCAATGGCAAATCCCCTCGNTTCAGCTCCATTNTN
JMFS129G11+           CGTTTCAAGAACACCCGGATGAGCTCCAATGGCAAATCCCCTCGCTTCAGCTCCATTCTC
JMFS091C08+               TCAAGAACACCCGGATGAGCTCCAATGGCAAATCCCCTCGCTTCAGCTCCATTCTC
JMFS055A06+               TCAAGAACACCCGGATGAGCTCCAATGGCAAATCCCCTCGCTTCAGCTCCATTCTC
                      ____________________________________________________________
consensus             CGTTTCAAGAACACCCGGATGAGCTCCAATGGCAAATCCCCTCGCTTCAGCTCCATTCTC
 
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JMSF047I06+           TTCAACGCTTCATCCAAAGCCTNGGAAACGCAGCGCTTCCGCTTGGCCGCCGCCCTCAAT
JMFS129G11+           TTCAACGCTTCATCCAAAGCCTCGGAAACGCAGCGCTTCCGCTTGGCCGCCGCCCTCAAT
JMFS091C08+           TTCAACGCTTCATCCAAAGCCTCGGAAACGCAGCGCTTCCGCTTGGCCGCCGCCCTCAAT
JMFS055A06+           TTCAACGCTTCATCCAAAGCCTCGGAAACGCAGCGCTTCCGCTTGGCCGCCGCCCTCAAT
                      ____________________________________________________________
consensus             TTCAACGCTTCATCCAAAGCCTCGGAAACGCAGCGCTTCCGCTTGGCCGCCGCCCTCAAT
 
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JMSF047I06+           TTCCTCGCCACTTTCAGNGTNTTCTCCCGCCGGGAAACCCCAATTTCGTGGCCCTTATCC
JMFS129G11+           TTCCTCGCCACTTTCAGCGTCTTCTCCCGCCGGGAAACCCCAATTTCGTGGCCCTTATCC
JMFS091C08+           TTCCTCGCCACTTTCAGCGTCTTCTCCCGCCGGGAAACCCCAATTTCGTGGCCCTTATCC
JMFS055A06+           TTCCTCGCCACTTTCAGCGTCTTCTCCCGCCGGGAAACCCCAATTTCGTGGCCCTTATCC
                      ____________________________________________________________
consensus             TTCCTCGCCACTTTCAGCGTCTTCTCCCGCCGGGAAACCCCAATTTCGTGGCCCTTATCC
 
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JMSF047I06+           GCCGCCTTNTTCATNTTCCTCGCCCGCTCGAATTTCAGNGAGTCGGGGACCTTTTGCTTC
JMFS129G11+           GCCGCCTTCTTCATCTTCCTCGCCCGCTCGAATTTCAGCGAGTCGGGGACCTTCTGCTTC
JMFS091C08+           GCCGCCTTCTTCATCTTCCTCGCCCGCTCGAATTTCAGCGAGTCGGGGACCTTCTGCTTC
JMFS055A06+           GCCGCCTTCTTCATCTTCCTCGCCCGCTCGAATTTCAGCGAGTCGGGGACCTTCTGCTTC
                      ____________________________________________________________
consensus             GCCGCCTTCTTCATCTTCCTCGCCCGCTCGAATTTCAGCGAGTCGGGGACCTTCTGCTTC
 
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JMSF047I06+           ATNTGCCGGTGCCGGCCCTGCATATAGTGAATGTCGCACAGNTTNTTCCCCTCCAGCACC
JMFS129G11+           ATCTGCCGGTGCCGGCCCTGCATATAGTGAATGTCGCACAGCTTCTTCCCCTCCAGCACC
JMFS091C08+           ATCTGCCGGTGCCGGCCCTGCATATAGTGAATGTCGCACAGCTTCTTCCCCTCCAGCACC
JMFS055A06+           ATCTGCCGGTGCCGGCCCTGCATATAGTGAATGTCGCACAGCTTCTTCCCCTCCAGCACC
                      ____________________________________________________________
consensus             ATCTGCCGGTGCCGGCCCTGCATATAGTGAATGTCGCACAGCTTCTTCCCCTCCAGCACC
 
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JMSF047I06+           CGCCGCTTGCACCGCCATTGCCTCCCGTCCGTCCGGTTGCACCGGAGATCGTCCGGCAAA
JMFS129G11+           CGCCGCTTGCACCGCCATTGCCTCCCGTCCGTCCGGTTGCACCGGAGATCGTCCGGCAAA
JMFS091C08+           CGCCGCTTGCACCGCCATTGCCTCCCGTCCGTCCGGTTGCACCGGAGATCGTCCGGCAAA
JMFS055A06+           CGCCGCTTGCACCGCCATTGCCTCCCGTCCGTCCGGTTGCACCGGAGATCGTCCGGCAAA
                      ____________________________________________________________
consensus             CGCCGCTTGCACCGCCATTGCCTCCCGTCCGTCCGGTTGCACCGGAGATCGTCCGGCAAA
 
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JMSF047I06+           GACTCCCCCTCCGACATAGGGTTTTTTTTTTCTTTCTACTTTTTCAACAATCCCTCGAGA
JMFS129G11+           GACTCCCCCTCCGACATAGGGTTTTTTTTTTCTTTCTACTTTTTCAACAATCCCTCGAGA
JMFS091C08+           GACTCCCCCTCCGACATAGGGTTTTTTTTTTCTTTCTACTTTTTCAACAATCCCTCGAGA
JMFS055A06+           GACTCCCCCTCCGACATAGGGTTTTTTTTTTCTTTCTACTTTTTCAACAATCCCTCGAGA
JMSF006P11+                                           TTTCTACTTTTTCAACAATCCCTCGAGA
                      ____________________________________________________________
consensus             GACTCCCCCTCCGACATAGGGTTTTTTTTTTCTTTCTACTTTTTCAACAATCCCTCGAGA
 
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JMSF047I06+           ACTCGAGATTTCCTCCCAAAGACTCAGTCTT                             
JMFS129G11+           ACTCGAGATTTCCTCCCAAAGACTCAGTCTTTCCTTGTGGGGAAGCCTTTCAAGAATCAA
JMFS091C08+           ACTCGAGATTTCCTCCCAAAGACTCAGTCTTTCCTTGTGGGGAAGCCTTTCAAGAATCAA
JMFS055A06+           ACTCGAGATTTCCTCCCAAAGACTCAGTCTTTCCTTGTGGGGAAGCCTTTCAAGAATCAA
JMSF006P11+           ACTCGAGATTTCCTCCCAAAGACTCAGTCTTTCCTTGTGGGGAAGCCTTTCAAGAATCAA
                      ____________________________________________________________
consensus             ACTCGAGATTTCCTCCCAAAGACTCAGTCTTTCCTTGTGGGGAAGCCTTTCAAGAATCAA
 
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JMFS129G11+           GATTAGGGTTTTGTGCCCCAGATTAGAAAAAACAACAAAAAATAAAAAAAATTTACTGGG
JMFS091C08+           GATTAGGGTTTTGTGCCCCAGATTAGAAAAAACAACAAAAAATAAAAAAAATTTACTGGG
JMFS055A06+           GATTAGGGTTTTGTGCCCCAGATTAGAAAAAACAACAAAAAATAAAAAAAATTTACTGGG
JMSF006P11+           GATTAGGGTTTTGTGCCCCAGATTAGAAAAAACAACAAAAAATAAAAAAAATTTACTGGG
                      ____________________________________________________________
consensus             GATTAGGGTTTTGTGCCCCAGATTAGAAAAAACAACAAAAAATAAAAAAAATTTACTGGG
 
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JMFS129G11+           AAAAAGGGTTTCAAGATTCAAGATTTAAGATTTTCCGTGTTG                  
JMFS091C08+           AAAAAGGGTTTCAAGATTCAAGATTTAAGATTTTCCGTGTTG                  
JMFS055A06+           AAAAAGGGTTTCAAGATTCAAGATTTAAGATTTTCCGTGTTG                  
JMSF006P11+           AAAAAGGGTTTCAAGATTCAAGATTTAAGATTTTCCGTGTTGGAGTGTGATGAAAGAGGA
                      ____________________________________________________________
consensus             AAAAAGGGTTTCAAGATTCAAGATTTAAGATTTTCCGTGTTGGAGTGTGATGAAAGAGGA
 
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JMSF006P11+           AGAAGAGTCCTACATTGTCTTGGTTGAGTCACAAGTGGAATCTATTTATCACTGCCACCC
                      ____________________________________________________________
consensus             AGAAGAGTCCTACATTGTCTTGGTTGAGTCACAAGTGGAATCTATTTATCACTGCCACCC