clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFS122F04 | Sequence | 571 | 009199 (3) | ref|XP_009600216.1| | 9e-84 | PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 | |||||
JMSF006J08 | Sequence | 292 | 009199 (3) | ref|XP_009600216.1| | 6e-24 | PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 | 310 | 008546 (2) | ref|XP_010113026.1| | 8e-09 | putative leucine-rich repeat receptor-like protein kinase [Morus notabilis] gb| |
JMSF026J04 | Sequence | 640 | 009199 (3) | ref|XP_009600216.1| | 1e-97 | PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 | 760 | 008546 (2) | ref|XP_010113026.1| | 1e-87 | putative leucine-rich repeat receptor-like protein kinase [Morus notabilis] gb| |
This contig is upended
. : . : . : . : . : . :
JMSF026J04+ CTGTTGAAACGGGGAGAGATCCTGTCAACTGATTATCTGCCAGGTC
____________________________________________________________
consensus CTGTTGAAACGGGGAGAGATCCTGTCAACTGATTATCTGCCAGGTC
. : . : . : . : . : . :
JMFS122F04+ TTGGAGAGATTACCCAGAGTTGCTGGAATTTCACCCGTGAAGTTATT
JMSF026J04+ AAGCCAGTAGAGTTTGGAGAGATTACCCAGAGTTGCTGGAATTTCACCCGTGAAGTTATT
____________________________________________________________
consensus AAGCCAGTAGAGTTTGGAGAGATTACCCAGAGTTGCTGGAATTTCACCCGTGAAGTTATT
. : . : . : . : . : . :
JMFS122F04+ TGAGTTGAGTGCTAAGAAGGATAATTCTGAAAGTTTCCCCAGTTCAGCAGGTACACTGCC
JMSF026J04+ TGAGTTGAGTGCTAAGAAGGATAATTCTGAAAGTTTCCCCAGTTCAGCAGGTACACTGCC
____________________________________________________________
consensus TGAGTTGAGTGCTAAGAAGGATAATTCTGAAAGTTTCCCCAGTTCAGCAGGTACACTGCC
. : . : . : . : . : . :
JMFS122F04+ ACTAAAGCTACACCCAGCAAGAATTAGTATGCTTAGTTTCTGCAGATCTCCAATCCTTGG
JMSF026J04+ ACTAAAGCTACACCCAGCAAGAATTAGTATGCTTAGTTTCTGCAGATCTCCAATCCTTGG
____________________________________________________________
consensus ACTAAAGCTACACCCAGCAAGAATTAGTATGCTTAGTTTCTGCAGATCTCCAATCCTTGG
. : . : . : . : . : . :
JMFS122F04+ AGAAATGGAGCCTGTGAGGCCTCGGTTAAATGACAGGTCTAAGGATATTAATTCAGTAAG
JMSF026J04+ AGAAATGGAGCCTGTGAGGCCTCGGTTAAATGACAGGTCTAAGGATATTAATTCAGTAAG
____________________________________________________________
consensus AGAAATGGAGCCTGTGAGGCCTCGGTTAAATGACAGGTCTAAGGATATTAATTCAGTAAG
. : . : . : . : . : . :
JMFS122F04+ ACCCCCAATATCACCATTTAGTTTTCCTTTCAAGCCCATAGTTGACAGTCCCAGTGCAGT
JMSF026J04+ ACCCCCAATATCACCATTTAGTTTTCCTTTCAAGCCCATAGTTGACAGTCCCAGTGCAGT
____________________________________________________________
consensus ACCCCCAATATCACCATTTAGTTTTCCTTTCAAGCCCATAGTTGACAGTCCCAGTGCAGT
. : . : . : . : . : . :
JMFS122F04+ GACCCTGGAGTTGTTGCAGGATACTCCTTCCCAGGATCCTCCACAAGGATCATCGGAGTC
JMSF026J04+ GACCCTGGAGTTGTTGCAGGATACTCCTTCCCAGGATCCTCCACAAGGATCATCGGAGTC
JMSF006J08+ AGTTGTTGCAGGATACTCCTTCCCAGGATCCTCCACAAGGATCATCGGAGTC
____________________________________________________________
consensus GACCCTGGAGTTGTTGCAGGATACTCCTTCCCAGGATCCTCCACAAGGATCATCGGAGTC
. : . : . : . : . : . :
JMFS122F04+ GTCCCAACTTGGAGGCGTGTTTTGCCACTGGTCTTTCAGAGAGGTGAGCACAGCTACATC
JMSF026J04+ GTCCCAACTTGGAGGCGTGTTTTGCCACTGGTCTTTCAGAGAGGTGAGCACAGCTACATC
JMSF006J08+ GTCCCAACTTGGAGGCGTGTTTTGCCACTGGTCTTTCAGAGAGGTGAGCACAGCTACATC
____________________________________________________________
consensus GTCCCAACTTGGAGGCGTGTTTTGCCACTGGTCTTTCAGAGAGGTGAGCACAGCTACATC
. : . : . : . : . : . :
JMFS122F04+ CCGAGAGTCCGTCTCGGCGAATATGAAGTGAAAAGATGCAGAGAGGATGAAGTAGGTGAG
JMSF026J04+ CCGAGAGTCCGTCTCGGCGAATATGAAGTGAAAAGATGCAGAGAGGATGAAGTAGGTGAG
JMSF006J08+ CCGAGAGTCCGTCTCGGCGAATATGAAGTGAAAAGATGCAGAGAGGATGAAGTAGGTGAG
____________________________________________________________
consensus CCGAGAGTCCGTCTCGGCGAATATGAAGTGAAAAGATGCAGAGAGGATGAAGTAGGTGAG
. : . : . : . : . : . :
JMFS122F04+ CAGCAGCCGGAGGGTTGCCATGGAATGGAATGTGCACACGCATGCACTCTCTCTATCTCT
JMSF026J04+ CAGCAGCCGGAGGGTTGCCATGGAATGGAATGTGCACACGCATGCACTCTCTCTATCTCT
JMSF006J08+ CAGCAGCCGGAGGGTTGCCATGGAATGGAATGTGCACACGCATGCACTCTCTCTATCTCT
____________________________________________________________
consensus CAGCAGCCGGAGGGTTGCCATGGAATGGAATGTGCACACGCATGCACTCTCTCTATCTCT
. : . : . : . : . : . :
JMFS122F04+ CTCACTTTGGTGCAGATGAGAAGAGGA
JMSF026J04+ CTCACTTTGGTGCAGATGAGAAGAGGAGAGATTGTAAGAGTTTGTGTTGTGTT
JMSF006J08+ CTCACTTTGGTGCAGATGAGAAGAGGAGAGATTGTAAGAGTTTGTGTTGTGTTGTTTTTC
____________________________________________________________
consensus CTCACTTTGGTGCAGATGAGAAGAGGAGAGATTGTAAGAGTTTGTGTTGTGTTGTTTTTC