Contig 009196:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF035C18Sequence557009196 (4)ref|XP_004237424.1|7e-46PREDICTED: aspartic proteinase-like protein 1 isoform X1 [Solanum lycopersicum]784021296ref|XP_002528982.1|2e-05Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis] gb|EEF
JMFS108C03Sequence627009196 (4)ref|XP_006363946.1|2e-27PREDICTED: aspartic proteinase-like protein 1-like isoform X2 [Solanum tuberosu
JMSF006B13Sequence252009196 (4)ref|XP_006363946.1|6e-05PREDICTED: aspartic proteinase-like protein 1-like isoform X2 [Solanum tuberosu
JMSF006C12Sequence252009196 (4)ref|XP_006363946.1|6e-05PREDICTED: aspartic proteinase-like protein 1-like isoform X2 [Solanum tuberosu302023436

Alignment

This contig is upended


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JMFS108C03+                       ACTTGATACAACTCAATCAAGTATGATACCTCCATTATTTNCCAGAAT
                      ____________________________________________________________
consensus                         ACTTGATACAACTCAATCAAGTATGATACCTCCATTATTTNCCAGAAT
 
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JMFS108C03+           ACTTTACCATCATCAACTTCAGATTCTAATCTATCAAGCACCCAAGACTATATATATGCT
                      ____________________________________________________________
consensus             ACTTTACCATCATCAACTTCAGATTCTAATCTATCAAGCACCCAAGACTATATATATGCT
 
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JMFS108C03+           GAGTGGTACAGGGAACCCCATAAATGATCAAATTAAAGTCATGAATTTTAAGCATAGAGA
                      ____________________________________________________________
consensus             GAGTGGTACAGGGAACCCCATAAATGATCAAATTAAAGTCATGAATTTTAAGCATAGAGA
 
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JMFS108C03+           GATGGTCTTATCTCTTAAGTGATATTTCAATCATCAATAACAAAATTGAAGAAAATAGAT
                      ____________________________________________________________
consensus             GATGGTCTTATCTCTTAAGTGATATTTCAATCATCAATAACAAAATTGAAGAAAATAGAT
 
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JMFS108C03+           AGAGAGAAAAGTGACCATCCAAACTCATTTCCAAGAGGCAAAGTTTTGCTTCCTTGAGAA
JMFF035C18+                        ACCATCCAAACTCATTTCCAAGAGGCAAAGTTTTGCTTCCTTGAGAA
                      ____________________________________________________________
consensus             AGAGAGAAAAGTGACCATCCAAACTCATTTCCAAGAGGCAAAGTTTTGCTTCCTTGAGAA
 
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JMFS108C03+           GGGAACACAAGCTGGAACTTAGGGCCGAGCTTCATCTTCTGCCGCCGCGAGGCGTCGCTG
JMFF035C18+           GGGAACACAAGCTGGAACTTAGGGCCGAGCTTCATCTTCTGCCGCCGCGAGGCGTCGCTG
                      ____________________________________________________________
consensus             GGGAACACAAGCTGGAACTTAGGGCCGAGCTTCATCTTCTGCCGCCGCGAGGCGTCGCTG
 
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JMFS108C03+           CTGATCAGACTCCGGTAGTACCCCGAGCTCCTCCGCTCCGGCCACGCTCCGGCAGTGCCC
JMFF035C18+           CTGATCAGACTCCGGTAGTACCCCGAGCTCCTCCGCTCCGGCCACGCTCCGGCAGTGCCC
JMSF006C12+                                                          TCCGGCAGTGCCC
JMSF006B13+                                                          TCCGGCAGTGCCC
                      ____________________________________________________________
consensus             CTGATCAGACTCCGGTAGTACCCCGAGCTCCTCCGCTCCGGCCACGCTCCGGCAGTGCCC
 
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JMFS108C03+           ACATCTCCGTTTCTCGACTCCCTAT-GCTTCCTCACCTCGTCGGAGAATCTATGGACTAG
JMFF035C18+           ACATCTCCGTTTCTCGACTCCCTATGGATTCCTCACCTCGTCGGAGAATCTATGGACTAG
JMSF006C12+           ACATCTCCGTTTCTCGACTCCCTAT-GCTTCCTCACCTCGTCGGAGAATCTATGGACTAG
JMSF006B13+           ACATCTCCGTTTCTCGACTCCCTAT-GCTTCCTCACCTCGTCGGAGAATCTATGGACTAG
                      ____________________________________________________________
consensus             ACATCTCCGTTTCTCGACTCCCTAT-GCTTCCTCACCTCGTCGGAGAATCTATGGACTAG
 
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JMFS108C03+           CCGCGACGAGTACATCGCCCCCGCCGCACTGTACTCAATCAGCATAACATAGACGACGAC
JMFF035C18+           CCGCGACGAGTACATCGCCCCCGCCGCACTGTACTCAATCAGCATAACATAGACGACGAC
JMSF006C12+           CCGCGACGAGTACATCGCCCCCGCCGCACTGTACTCAATCAGCATAACATAGACGACGAC
JMSF006B13+           CCGCGACGAGTACATCGCCCCCGCCGCACTGTACTCAATCAGCATAACATAGACGACGAC
                      ____________________________________________________________
consensus             CCGCGACGAGTACATCGCCCCCGCCGCACTGTACTCAATCAGCATAACATAGACGACGAC
 
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JMFS108C03+           CGCCACAACAGCCGCCAGGCGCATCGCCATTGCCTTAATTGCAAGCTCAAATCCAACACA
JMFF035C18+           CGCCACAACAGCCGCCAGGCGCATCGCCATTGCCTTAATTGCAAGCTCAAATCCAACACA
JMSF006C12+           CGCCACAACAGCCGCCAGGCGCATCGCCATTGCCTTAATTGCAAGCTCAAATCCAACACA
JMSF006B13+           CGCCACAACAGCCGCCAGGCGCATCGCCATTGCCTTAATTGCAAGCTCAAATCCAACACA
                      ____________________________________________________________
consensus             CGCCACAACAGCCGCCAGGCGCATCGCCATTGCCTTAATTGCAAGCTCAAATCCAACACA
 
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JMFS108C03+           CACAGTTGCTCAAAGCGGAATCTTGCCAACCTAAACAACA                    
JMFF035C18+           CACAGTTGCTCAAAGCGGAATCTTGCCAACCTAAACAACACCGCAAACAAGCT       
JMSF006C12+           CACAGTTGCTCAAAGCGGAATCTTGCCAACCTAAACAACACCGCAAACAAGCT       
JMSF006B13+           CACAGTTGCTCAAAGCGGAATCTTGCCAACCTAAACAACACCGCAAACAAGCTAAACGGC
                      ____________________________________________________________
consensus             CACAGTTGCTCAAAGCGGAATCTTGCCAACCTAAACAACACCGCAAACAAGCTAAACGGC