Contig 009195:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF005M09Sequence333009195 (7)ref|XP_009783164.1|6e-21PREDICTED: transcription factor bHLH121-like [Nicotiana sylvestris]322009903 (5)
JMSF026I20Sequence661009195 (7)ref|XP_009788103.1|1e-82PREDICTED: transcription factor bHLH121 [Nicotiana sylvestris]795009195 (7)ref|XP_009788103.1|3e-54PREDICTED: transcription factor bHLH121 [Nicotiana sylvestris]
JMSF033O19Sequence655009195 (7)ref|XP_006359649.1|7e-76PREDICTED: transcription factor bHLH121-like isoform X1 [Solanum tuberosum]735009195 (7)ref|XP_009788103.1|8e-39PREDICTED: transcription factor bHLH121 [Nicotiana sylvestris]
JMSF051H05Sequence735009195 (7)ref|XP_006359649.1|3e-78PREDICTED: transcription factor bHLH121-like isoform X1 [Solanum tuberosum]743009195 (7)ref|XP_009788103.1|1e-42PREDICTED: transcription factor bHLH121 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF033O19- GAAGTTAGACCATTATAA
rJMSF051H05- CATTATAA
                      ____________________________________________________________
consensus GAAGTTAGACCATTATAA
 
. : . : . : . : . : . :
rJMSF033O19- GGTATGTAGTAGTTGAAATACATGAAGACAAGAAAACTTTCCCCACACCCACTTCAGAGT
rJMSF051H05- GGTATGTAGTAGTTGAAATACATGAAGACAAGAAAACTTTCCCCACACCCACTTCAGAGT
rJMSF026I20- AGTTGAAATACATGAAGACAAGAAAACTTTCCCCACACCCACTTCAGAGT
                      ____________________________________________________________
consensus GGTATGTAGTAGTTGAAATACATGAAGACAAGAAAACTTTCCCCACACCCACTTCAGAGT
 
. : . : . : . : . : . :
rJMSF033O19- ACAAGGAAAATACCTTACAAGAAATAGCAAATTAAGGGCTACTCGTTGTGGCAGGAATAC
rJMSF051H05- ACAAGGAAAATACCTTACAAGAAATAGCAAATTAAGGGCTACTCGTTGTGGCAGGAATAC
rJMSF026I20- ACAAGGAAAATACCTTACAAGAAATAGCAAATTAAGGGCTACTCGTTGTGGCAGGAATAC
                      ____________________________________________________________
consensus ACAAGGAAAATACCTTACAAGAAATAGCAAATTAAGGGCTACTCGTTGTGGCAGGAATAC
 
. : . : . : . : . : . :
rJMSF033O19- CCTCGCCTCACTAATCAAATGTATTGTGATACAGAATAGCTACTTGGGTAAAAAAGAAAA
rJMSF051H05- CCTCGCCTCACTAATCAAATGTATTGTGATACAGAATAGCTAATTGGGTAAAAAAGAAAA
rJMSF026I20- CCTCGCCTCACTAATCAAATGTATTGTGATACAGAATAGCTAATTGGGTAAAAAAGAAAA
                      ____________________________________________________________
consensus CCTCGCCTCACTAATCAAATGTATTGTGATACAGAATAGCTAATTGGGTAAAAAAGAAAA
 
. : . : . : . : . : . :
rJMSF033O19- CCAGGTAAGGTATAAACTGTAGAAAACCTGGCTCTTATTCTACTCCCTTCATTTCTCGTC
rJMSF051H05- CCAGGTAAGGTATAAACTGTAGAAAACCTGGCTCTTATTCTACTCCCTTCATTTCTCGTC
rJMSF026I20- CCAGGTAAGGTATAAACTGTAGAAAACCTGGCTCTTATTCTACTCCCTTCATTTCTCGTC
                      ____________________________________________________________
consensus CCAGGTAAGGTATAAACTGTAGAAAACCTGGCTCTTATTCTACTCCCTTCATTTCTCGTC
 
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rJMSF033O19- TTTCTTTGAGTCACCAACTACACTATTTGATGAAAACGCCTGTACACTATGAGACGATGA
rJMSF051H05- TTTCTTTGAGTCACCAACTACACTATTTGATGAAAACGCCTGTACACTATGAGACGATGA
rJMSF026I20- TTTCTTTGAGTCACCAACTACACTATTTGATGAAAACGCCTGTACACTATGAGACGATGA
                      ____________________________________________________________
consensus TTTCTTTGAGTCACCAACTACACTATTTGATGAAAACGCCTGTACACTATGAGACGATGA
 
. : . : . : . : . : . :
rJMSF033O19- GCACCTACTAGAAGAACTTCCATCTGTGAGGCTGTTGTTCTCCATTGTCCGTTTTTTAGC
rJMSF051H05- GCACCTACTAGAAGAACTTCCATCTGTGAGGCTGTTGTTCTCCATTGTCCGTTTTTTAGC
rJMSF026I20- GCACCTACTAGAAGAACTTCCATCTGTGAGGCTGTTGTTCTCCATTGTCCGTTTTTTAGC
                      ____________________________________________________________
consensus GCACCTACTAGAAGAACTTCCATCTGTGAGGCTGTTGTTCTCCATTGTCCGTTTTTTAGC
 
. : . : . : . : . : . :
rJMSF033O19- CCTCCTTTGTCCAGATGAGAGTTCCTGTTCCGAGGTAGATCCAGGTGTCTTGAGCTCTAG
rJMSF051H05- CCTCCTTTGTCCAGATGAGAGTTCCTGTTCCGAGGTAGATCCAGGTGTCTTGAGCTCTAG
rJMSF026I20- CCTCCTTTGTCCAGATGAGAGTTCCTGTTCCGAGGTAGATCCAGGTGTCTTGAGCTCTAG
                      ____________________________________________________________
consensus CCTCCTTTGTCCAGATGAGAGTTCCTGTTCCGAGGTAGATCCAGGTGTCTTGAGCTCTAG
 
. : . : . : . : . : . :
rJMSF033O19- ATCTGTTGCAACTTCATTTGAGCCCTCACTTCTTTCAATCCTGCTCTCTTCTTGATCTGA
rJMSF051H05- ATCTGTTGCAACTTCATTTGAGCCCTCACTTCTTTCAATCCTGCTCTCTTCTTGATCTGA
rJMSF026I20- ATCTGTTGCAACTTCATTTGAGCCCTCACTTCTTTCAATCCTGCTCTCTTCTTGATCTGA
                      ____________________________________________________________
consensus ATCTGTTGCAACTTCATTTGAGCCCTCACTTCTTTCAATCCTGCTCTCTTCTTGATCTGA
 
. : . : . : . : . : . :
rJMSF033O19- CTTGTGTCTAGAATCTTGTTTGCTTAAACCATGGGTCCTACTACTGGGTTGAACAGCTGG
rJMSF051H05- CTTGTGTCTAGAATCTTGTTTGCTTAAACCATGGGTCCTACTACTGGGTTGAACAGCTGG
rJMSF026I20- CTTGTGTCTAGAATCTTGTTTGCTTAAACCATGGGTCCTACTACTGGGTTGAACAGCTGG
JMSF051H05+ GG
                      ____________________________________________________________
consensus CTTGTGTCTAGAATCTTGTTTGCTTAAACCATGGGTCCTACTACTGGGTTGAACAGCTGG
 
. : . : . : . : . : . :
rJMSF033O19- AGAGACGTGTGTGGATGGCTGCTCAATGATTGTTGTTGGAGTCATATACGGAACAAAAGT
rJMSF051H05- AGAGACGTATGTGGATGGCTGCTCAATGATTGTTGTTGGAGTCATATACGGAACAAAAGT
rJMSF026I20- AGAGACGTGTGTGGATGGCTGCTCAATGATTGTTGTTGGAGTCATATACGGAACAAAAGT
JMSF026I20+ GAGTCATATACGGAACAAAAGT
JMSF051H05+ AGAGACGTATGTGGATGGCTGCTCAATGATTGTTGTNGGAGTCATATACGGAACAAAAG-
                      ____________________________________________________________
consensus AGAGACGTATGTGGATGGCTGCTCAATGATTGTTGTTGGAGTCATATACGGAACAAAAGT
 
. : . : . : . : . : . :
rJMSF033O19- TGAACAAGGATTGGGGATAACAGCTGGATTCTGATTCCC-AAAAATGGGTAAGCTTGCAT
rJMSF051H05- TGAACAAGGATTGGGGATAACAGCTGGATTCTGATTCCCAAAAAATGGGTAAGCTTGCAT
rJMSF026I20- TGAACAAGGATTGGGGATAACAGCTGGATTCTGATTCCCAAAAAATGGGTAAGCTTGCAT
JMSF033O19+ GGGGATAACAGCTGGATTCTGATTCCCAAAAAATGGGTAAGCTTGCAT
JMSF026I20+ TGAACAAGGATTGGGGATAACAGCTGGATTCTGATTCCCAAAAAATGGGTAAGCTTGCAT
JMSF051H05+ TGAACAAGGATTGGGGATAACAGCTGGATTCTGATTCCCAAAAAATGGGTAAGCTTGCAT
                      ____________________________________________________________
consensus TGAACAAGGATTGGGGATAACAGCTGGATTCTGATTCCCAAAAAATGGGTAAGCTTGCAT
 
. : . : . : . : . : . :
rJMSF033O19- TGATGGATGCATAGGAATTGGTCCAGTTGGAATTGGCACGGGCACTGGATATGGGTAT
rJMSF051H05- TGATGGATGCATAGGAATTGGTCCAGTTGGAATTGGCACGGGCACTGGATATGGGTATGA
rJMSF026I20- TGATGGATGCATAGGAATTGGTCCAGTTGGAATTGGCACGGGCACTGGATATGGGTATGA
JMSF033O19+ TGATGGATGCATAGGAATTGGTCCAGTTGGAATTGGCACGGGCACTGGATATGGGTATGA
JMSF026I20+ TGATGGATGCATAGGAATTGGTCCAGTTGGAATTGGCACGGGCACTGGATATGGGTATGA
JMSF051H05+ TGATGGATGCATAGGAATTGGTCCAGTTGGAATTGGCACGGGCACTGGATATGGGTATGA
                      ____________________________________________________________
consensus TGATGGATGCATAGGAATTGGTCCAGTTGGAATTGGCACGGGCACTGGATATGGGTATGA
 
. : . : . : . : . : . :
rJMSF051H05- AGGAGGATGCATGAC
rJMSF026I20- AGGAGGATGCATGACTAAAGGATGATCCATCCCAGCCCATGGATACATAGTCCTAAGTCT
JMSF033O19+ AGGAGGATGCATGACTAAAGGATGATCCATCCCAGCCCATGGATACATAGTCCTAAGTCT
JMSF026I20+ AGGAGGATGCATGACTAAAGGATGATCCATCCCAGCCCATGGATACATAGTCCTAAGTCT
JMSF051H05+ AGGAGGATGCATGACTAAAGGATGATCCATCCCAGCCCATGGATACATAGTCCTAAGTCT
                      ____________________________________________________________
consensus AGGAGGATGCATGACTAAAGGATGATCCATCCCAGCCCATGGATACATAGTCCTAAGTCT
 
. : . : . : . : . : . :
rJMSF026I20- TTGTTGGTATGGAGCATNCAGGCTT
JMSF033O19+ TTGTTGGTATTGAGCATTCAGGCTTTCAATATCAGATTTAATAGAGGACTTCTCTTCTCT
JMSF026I20+ TTGTTGGTATTGAGCATTCAGGCTTTCAATATCAGATTTAATAGAGGACTTCTCTTCTCT
JMSF051H05+ TTGTTGGTATTGAGCATTCAGGCTTTCAATATCAGATTTAATAGAGGACTTCTCTTCTCT
                      ____________________________________________________________
consensus TTGTTGGTATTGAGCATTCAGGCTTTCAATATCAGATTTAATAGAGGACTTCTCTTCTCT
 
. : . : . : . : . : . :
JMSF033O19+ AAGATCATTCTTTTCTTGAGTCAACTCACGGCATTCATCAGTAAGAGCTGCATACTCCGA
JMSF026I20+ AAGATCATTCTTTTCTTGAGTCAACTCACGGCATTCATCAGTAAGAGCTGCATACTCCGA
JMSF051H05+ AAGATCATTCTTTTCTTGAGTCAACTCACGGCATTCATCAGTAAGAGCTGCATACTCCGA
                      ____________________________________________________________
consensus AAGATCATTCTTTTCTTGAGTCAACTCACGGCATTCATCAGTAAGAGCTGCATACTCCGA
 
. : . : . : . : . : . :
JMSF033O19+ CTTAAGCCTGCTAACTTGATCACTCAAATCCTTCACCATTTGAATGGTATCGGTGAGAAT
JMSF026I20+ CTTAAGCCTGCTAACTTGATCACTCAAATCCTTCACCATTTGAATGGTATCGGTGAGAAT
JMSF051H05+ CTTAAGCCTGCTAACTTGATCACTCAAATCCTTCACCATTTGAATGGTATCGGTGAGAAT
                      ____________________________________________________________
consensus CTTAAGCCTGCTAACTTGATCACTCAAATCCTTCACCATTTGAATGGTATCGGTGAGAAT
 
. : . : . : . : . : . :
JMSF033O19+ AGAGGCTTTATCGTTTTTAGGCCTATCAGGATCAAGAGTGTTTCCCAATTCTGTGAACTG
JMSF026I20+ AGAGGCTTTATCGTTTTTAGGCCTATCAGGATCAAGAGTGTTTCCCAATTCTGTGAACTG
JMSF051H05+ AGAGGCTTTATCGTTTTTAGGCCTATCAGGATCAAGAGTGTTTCCCAATTCTGTGAACTG
JMSF005M09+ AGGATCAAGAGTGTTTCCCAATTCTGTGAACTG
                      ____________________________________________________________
consensus AGAGGCTTTATCGTTTTTAGGCCTATCAGGATCAAGAGTGTTTCCCAATTCTGTGAACTG
 
. : . : . : . : . : . :
JMSF033O19+ CTCATTCAAACGATCCCTCCTCAATTTCTCCCGATCAGCCTTCTGCACTTTCCGTGCAGC
JMSF026I20+ CTCATTCAAACGATCCCTCCTCAATTTCTCCCGATCAGCCTTCTGCACTTTCCGTGCAGC
JMSF051H05+ CTCATTCAAACGATCCCTCCTCAATTTCTCCCGATCAGCCTTCTGCACTTTCCGTGCAGC
JMSF005M09+ CTCATTCAAACGATCCCTCCTCAATTTCTCCCGATCAGCCTTCTGCACTTTCCGTGCAGC
                      ____________________________________________________________
consensus CTCATTCAAACGATCCCTCCTCAATTTCTCCCGATCAGCCTTCTGCACTTTCCGTGCAGC
 
. : . : . : . : . : . :
JMSF033O19+ AATAGAGTCTCTGAGTTCTGCTTCTGGGCGGTCCTTAGCACTGCAATCGGGAGGTAACCG
JMSF026I20+ AATAGAGTCTCTGAGTTCTGCTTCTGGGCGGTCCTTAGCACTGCAATCGGGAGGTAACCG
JMSF051H05+ AATAGAGTCTCTGAGTTCTGCTTCTGGGCGGTCCTTAGCACTGCAATCGGGAGGTAACCG
JMSF005M09+ AATAGAGTCTCTGAGTTCTGCTTCTGGGCGGTCCTTAGCACTGCAATCGGGAGGTAACCG
                      ____________________________________________________________
consensus AATAGAGTCTCTGAGTTCTGCTTCTGGGCGGTCCTTAGCACTGCAATCGGGAGGTAACCG
 
. : . : . : . : . : . :
JMSF033O19+ ATGTAAGCTGATATCAGGAAGAGGGTGCTGGGTGAATTCCGGTAACGATGTGCTCGGGGC
JMSF026I20+ ATGTAAGCTGATATCAGGAAGAGGGTGCTGGGTGAATTCCGGTAACGATGTGCTCGGGGC
JMSF051H05+ ATGTAAGCTGATATCAGGAAGAGGGTGCTGGGTGAATTCCGGTAACGATGTGCTCGGGGC
JMSF005M09+ ATGTAAGCTGATATCAGGAAGAGGGTGCTGGGTGAATTCCGGTAACGATGTGCTCGGGGC
                      ____________________________________________________________
consensus ATGTAAGCTGATATCAGGAAGAGGGTGCTGGGTGAATTCCGGTAACGATGTGCTCGGGGC
 
. : . : . : . : . : . :
JMSF033O19+ GTTAATCGACTGATAAAAAGCACCGGCGTCGTGGTTCGATCGATCCATGGCTGCGATGAT
JMSF026I20+ GTTAATCGACTGATAAAAAGCACCGGCGTCGTGGTTC
JMSF051H05+ GTTAATCGACTGATAAAAAGCACCGGCGTCGTGGTTCGATCGATCCATGGCTGCGATGAT
JMSF005M09+ GTTAATCGACTGATAAAAAGCACCGGCGTCGTGGTTCGATCGATCCATGGCTGCGATGAT
                      ____________________________________________________________
consensus GTTAATCGACTGATAAAAAGCACCGGCGTCGTGGTTCGATCGATCCATGGCTGCGATGAT
 
. : . : . : . : . : . :
JMSF033O19+ TGGTGT
JMSF051H05+ TGGTGT
JMSF005M09+ TGGTGTGACCTGTGTGAGATTATTGATTCGCGACTAGTGGGCTATCGGGTTTATCCAATC
                      ____________________________________________________________
consensus TGGTGTGACCTGTGTGAGATTATTGATTCGCGACTAGTGGGCTATCGGGTTTATCCAATC