Contig 009190:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF005E19Sequence413009190 (3)emb|CDO99783.1|3e-09unnamed protein product [Coffea canephora]
JMSF014H11Sequence508009190 (3)emb|CDO99783.1|2e-19unnamed protein product [Coffea canephora]662022491ref|XP_009763932.1|166PREDICTED: uncharacterized protein LOC104215747 [Nicotiana sylvestris]
JMSF023P16Sequence663009190 (3)emb|CDO99783.1|4e-41unnamed protein product [Coffea canephora]756015039ref|XP_011084289.1|100PREDICTED: uncharacterized protein LOC105166586 [Sesamum indicum]

Alignment

This contig is upended


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JMSF023P16+                                                                    TTA
                      ____________________________________________________________
consensus                                                                      TTA
 
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JMSF023P16+           CAAACTGAACCATTTACAGTAACTCGACCTTGAAAAATCAGTTCTTCGCTGCTCCTTCTT
                      ____________________________________________________________
consensus             CAAACTGAACCATTTACAGTAACTCGACCTTGAAAAATCAGTTCTTCGCTGCTCCTTCTT
 
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JMSF014H11+                                                    TGCAGGGTTTCGAAAATTC
JMSF023P16+           GATGCCACTCCAGCAGCAGCGAGGATTTTACTGAGGCGTTGTGCAGGGTTTCGAAAATTC
                      ____________________________________________________________
consensus             GATGCCACTCCAGCAGCAGCGAGGATTTTACTGAGGCGTTGTGCAGGGTTTCGAAAATTC
 
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JMSF014H11+           TCGTTATAGAACCGGCGGGCAGCTTTCGAATACTTAGGCTCAGTTGAGAGCGCCGCAGGT
JMSF023P16+           TCGTTATAGAACCGGCGGGCAGCTTTCGAATACTTAGGCTCAGTTGAGAGCGCCGCAGGT
                      ____________________________________________________________
consensus             TCGTTATAGAACCGGCGGGCAGCTTTCGAATACTTAGGCTCAGTTGAGAGCGCCGCAGGT
 
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JMSF014H11+           TTGGATTTAGGAGCATTCTCGCTCTTCATCGTCGTCGTCTTCTTCTTCTTCTTGCTCGTC
JMSF023P16+           TTGGATTTAGGAGCATTCTCGCTCTTCATCGTCGTCGTCTTCTTCTTCTTCTTGCTCGTC
                      ____________________________________________________________
consensus             TTGGATTTAGGAGCATTCTCGCTCTTCATCGTCGTCGTCTTCTTCTTCTTCTTGCTCGTC
 
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JMSF014H11+           TTGGCAATGGCCATCGCGTGGAGAAGACTCGCTGGAGCGGGATTCCCTTTCCCATCCCGC
JMSF023P16+           TTGGCAATGGCCATCGCGTGGAGAAGACTCGCTGGAGCGGGATTCCCTTTCCCATCCCGC
JMSF005E19+                     CCATCGCGTGGAGAAGACTCGCTGGAGCGGGATTCCCTTTCCCATCCCGC
                      ____________________________________________________________
consensus             TTGGCAATGGCCATCGCGTGGAGAAGACTCGCTGGAGCGGGATTCCCTTTCCCATCCCGC
 
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JMSF014H11+           ACGATCCATGGGGTATAGAGCTGCTCCTCGGAGTTTGAGGTTGAGGTTATAGGCGGAGGT
JMSF023P16+           ACGATCCATGGGGTGTAGAGCTGCTCCTCGGAGTTTGAGGTTGAGGTTATAGGCGGAGGT
JMSF005E19+           ACGATCCATGGGGTGTAGAGCTGCTCCTCGGAGTTTGAGGTTGAGGTTATAGGCGGAGGT
                      ____________________________________________________________
consensus             ACGATCCATGGGGTGTAGAGCTGCTCCTCGGAGTTTGAGGTTGAGGTTATAGGCGGAGGT
 
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JMSF014H11+           GAAGGCTTCGGCTTCGGCTTGGGAGGAGCGAAAGTGATGTTGAATTCAGTATTGGCGGAA
JMSF023P16+           GAAGGCTTCGGCTTCGGCTTGGGAGGAGCGAAAGTGATGTTGAATTCAGTATTGGCGGAA
JMSF005E19+           GAAGGCTTCGGCTTCGGCTTGGGAGGAGCGAAAGTGATGTTGAATTCAGTATTGGCGGAA
                      ____________________________________________________________
consensus             GAAGGCTTCGGCTTCGGCTTGGGAGGAGCGAAAGTGATGTTGAATTCAGTATTGGCGGAA
 
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JMSF014H11+           GTGGAGAGCGAAGATGCGATTACGCACCGGAGACGACAGTGAGTGATGCGAGCAAGCGGA
JMSF023P16+           GTGGAGAGCGAAGATGCGATTACGCACCGGAGACGACAGTGAGTGATGCGAGCAAGCGGA
JMSF005E19+           GTGGAAAGCGAAGATGCGATTACGCACCGGAGACGACAGTGAGTGATGCGAGCAAGCGGA
                      ____________________________________________________________
consensus             GTGGAGAGCGAAGATGCGATTACGCACCGGAGACGACAGTGAGTGATGCGAGCAAGCGGA
 
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JMSF014H11+           AGTGATGTCGAGAGGTTGAGGAAGGTGAAGGCGGAGGTGGACGCCGCCGCAAACGCCGGT
JMSF023P16+           AGTGATGTCGAGAGGTTGAGGAAGGTGAAGGCGGAGGTGGACGCCGCCGCAACCGCCGGT
JMSF005E19+           AGTGATGTCGAGAGGTTGAGGAAGGTGAAGGCGGAGGTGGACGCCGCCGCAACCGCCGGT
                      ____________________________________________________________
consensus             AGTGATGTCGAGAGGTTGAGGAAGGTGAAGGCGGAGGTGGACGCCGCCGCAACCGCCGGT
 
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JMSF014H11+           ATTGCCGCCATCCGAGCCGGGCCGGAGTTCCGGTAGTTTTATCGGGGCTCAGCTTGTGGG
JMSF023P16+           ATTGCCGCCATCCGAGCCGGGCCGGAGTTCCGGTAGTTTTATCGGGGCTCAGCTTGTGGG
JMSF005E19+           ATTGCCGCCATCCGAGCCGGGCCGGAGTTCCGGTAGTTTTATCGGGGCTCAGCTTGTGGG
                      ____________________________________________________________
consensus             ATTGCCGCCATCCGAGCCGGGCCGGAGTTCCGGTAGTTTTATCGGGGCTCAGCTTGTGGG
 
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JMSF014H11+           TTTTGGT                                                     
JMSF023P16+           TTTTGGTTGGTTGTCCGAGACCGAGAGAGAGGTTTATACTTTAGATTTTAGAAGATGATC
JMSF005E19+           TTTTGGTTGGTTGTCCGAGACCGAGAGAGAGGTTTATACTTTAGATTTTAGAAGATGATC
                      ____________________________________________________________
consensus             TTTTGGTTGGTTGTCCGAGACCGAGAGAGAGGTTTATACTTTAGATTTTAGAAGATGATC