clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFS065H11 | Sequence | 642 | 009188 (10) | ref|XP_009624787.1| | 4e-31 | PREDICTED: putative late blight resistance protein homolog R1A-3 [Nicotiana tom | |||||
JMFS098B12 | Sequence | 625 | 009188 (10) | ref|XP_009624787.1| | 1e-30 | PREDICTED: putative late blight resistance protein homolog R1A-3 [Nicotiana tom | |||||
JMFS111H05 | Sequence | 625 | 009188 (10) | ref|XP_009624787.1| | 2e-31 | PREDICTED: putative late blight resistance protein homolog R1A-3 [Nicotiana tom | |||||
JMFS135A03 | Sequence | 559 | 009188 (10) | ref|XP_009624787.1| | 1e-27 | PREDICTED: putative late blight resistance protein homolog R1A-3 [Nicotiana tom | |||||
JMFS164B08 | Sequence | 518 | 009188 (10) | ref|XP_006359790.1| | 3e-21 | PREDICTED: putative late blight resistance protein homolog R1B-17-like [Solanum | |||||
JMFS164F10 | Sequence | 570 | 009188 (10) | ref|XP_009624787.1| | 7e-34 | PREDICTED: putative late blight resistance protein homolog R1A-3 [Nicotiana tom | |||||
JMSF005C12 | Sequence | 279 | 009188 (10) | ref|XP_009624787.1| | 3e-06 | PREDICTED: putative late blight resistance protein homolog R1A-3 [Nicotiana tom | 391 | 008436 (6) | |||
JMSF030M22 | Sequence | 618 | 009188 (10) | ref|XP_009624787.1| | 2e-27 | PREDICTED: putative late blight resistance protein homolog R1A-3 [Nicotiana tom | 607 | 008436 (6) | ref|XP_011070823.1| | 1e-06 | PREDICTED: putative late blight resistance protein homolog R1B-17 [Sesamum indi |
JMSF038C24 | Sequence | 673 | 009188 (10) | ref|XP_009624787.1| | 9e-36 | PREDICTED: putative late blight resistance protein homolog R1A-3 [Nicotiana tom | 843 | 008436 (6) | ref|XP_011070823.1| | 6e-27 | PREDICTED: putative late blight resistance protein homolog R1B-17 [Sesamum indi |
JMSF045O09 | Sequence | 712 | 009188 (10) | ref|XP_006359790.1| | 1e-62 | PREDICTED: putative late blight resistance protein homolog R1B-17-like [Solanum | 594 | 008436 (6) | gb|AGX27500.1| | 9e-07 | NBS-LRR class resistance protein Fy2-Ry2 [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
JMSF045O09+ CC
____________________________________________________________
consensus CC
. : . : . : . : . : . :
JMSF045O09+ GACCATACATCATCCATTACAATGAAATACTTTCCACCCACCAAAAATTCTTGTATTCTT
____________________________________________________________
consensus GACCATACATCATCCATTACAATGAAATACTTTCCACCCACCAAAAATTCTTGTATTCTT
. : . : . : . : . : . :
JMSF045O09+ ACTGNTAAGCTTTCCTCGGACATATCATGAAACTCTTTGGTTTTCTTTGTGAAATTACTT
____________________________________________________________
consensus ACTGNTAAGCTTTCCTCGGACATATCATGAAACTCTTTGGTTTTCTTTGTGAAATTACTT
. : . : . : . : . : . :
JMSF045O09+ AGAATGTCCAAGAATATTTGTTTTCGATTAAAAGTTCTTGAAACATAAACCCAAAGCCGA
____________________________________________________________
consensus AGAATGTCCAAGAATATTTGTTTTCGATTAAAAGTTCTTGAAACATAAACCCAAAGCCGA
. : . : . : . : . : . :
JMSF045O09+ GTAAAAAATTCAAACTGCAAATCACGGTCCTTGAACACCATTTTGGTTAATGTGGTTTTG
JMSF038C24+ TTTG
____________________________________________________________
consensus GTAAAAAATTCAAACTGCAAATCACGGTCCTTGAACACCATTTTGGTTAATGTGGTTTTG
. : . : . : . : . : . :
JMSF045O09+ CCAAGACCCGCCATCCCTTTAATTGAGATAAATTCCAAATCAGTTGACCCTCCCAAGAGA
JMSF038C24+ CCAAGACCCGCCATCCCTTTAATTGAGATAAATTCCAAATCAGTTGACCCTCCCAAGAGA
JMSF030M22+ CCCAAGAGA
JMFS098B12+ CCTTTAATTGAGATAAATTCCAAATCAGTTGACCCTCCCAAGAGA
JMFS111H05+ ATAAATTCCAAATCAGTTGACCCTCCCAAGAGA
JMFS065H11+ CCTTTAATTGAGATAAATTCCAAATCAGTTGACCCTCCCAAGAGA
____________________________________________________________
consensus CCAAGACCCGCCATCCCTTTAATTGAGATAAATTCCAAATCAGTTGACCCTCCCAAGAGA
. : . : . : . : . : . :
JMSF045O09+ CGCCCCTTTATAAATTTTGCTTCATCATCAAAACCAACCACATCTTCTTCTTCTACCACC
JMSF038C24+ CGCCCCTTTATAAATTTTGCTTCATCATCAAAACCAACCACATCTTCTTCTTCTACCACC
JMSF030M22+ CGCCCCTTTATAAATTTTGCTTCATCATCAAAACCAACCACATCTTCTTCTTCTACCACC
JMFS098B12+ CGCCCCTTTATAAATTTTGCTTCATCATCAAAACCAACCACATCTTCTTCTTCTACCACC
JMFS111H05+ CGCCCCTTTATAAATTNTGCTTCATCATCAAAACCAACCACATCTTCTTCTTCTACCACC
JMFS135A03+ GCTTCATCATCAAAACCAACCACATCTTCTTCTTCTACCACC
JMFS164F10+ ATCAAAACCAACCACATCTTCTCTTTCTACCACC
JMFS065H11+ CGCCCCTTTATAAATTNTGCTTCATCATCAAAACCAACCACATCTTCTTCTTCTACCACC
____________________________________________________________
consensus CGCCCCTTTATAAATTTTGCTTCATCATCAAAACCAACCACATCTTCTTCTTCTACCACC
. : . : . : . : . : . :
JMSF045O09+ GGAGCCATCCTCTGCATAATAGGTTGACCTCTGTTTGGGTCATCTATGAGGGCCTGAAGA
JMSF038C24+ GGAGCCATCCTCTGCATAATAGGTTGACCTCTGTTTGGGTCATCTATGAGGGCCTGAAGA
JMSF030M22+ GGAGCCATCCTCTGCATAATAGGTTGACCTCTGTTTGGGTCATCTATGAGGGCCTGAAGA
JMFS098B12+ GGAGCCATCCTCTGCATAATAGGTTGACCTCTGTTTGGGTCATCTATGAGGGCCTGAAGA
JMFS111H05+ GGAGCCATCCTCTGCATAATAGGTTGACCTCTGTTTGGGTCATCTATGAGGGCCTGAAGA
JMFS135A03+ GGAGCCATCCTCTGCATAATAGGTTGACCTCTGTTTGGGTCATCTATGAGGGCCTGAAGA
JMFS164F10+ GGAGCCATCCTCTGCATAATAGGTTGACCTCTGTTTGGGTCATCTATGAGGGCCTGAAGA
JMFS164B08+ GCATAATAGGTTGACCTCTGTTTGGGTCATCTATGAGGGCCTGAAGA
JMFS065H11+ GGAGCCATCCTCTGCATAATAGGTTGACCTCTGTTTGGGTCATCTATGAGGGCCTGAAGA
____________________________________________________________
consensus GGAGCCATCCTCTGCATAATAGGTTGACCTCTGTTTGGGTCATCTATGAGGGCCTGAAGA
. : . : . : . : . : . :
JMSF045O09+ GCTACGCTGTTGTCTTGCCTGATTTTCTTAACCTTGTCTCTGATGCTTTGGATCTCTCTC
JMSF038C24+ GCTACGCTGTTGTCTTGCCTGATTTTCTTAACCTTGTCTCTGATGCTTTGGATCTCTCTC
JMSF030M22+ GCTACGCTGTTGTCTTGCCTGATTTTCTTAACCTTGTCTCTGATGCTTTGGATCTCTCTC
JMFS098B12+ GCTACGCTGTTGTCTTGCCTGATTTTCTTAACCTTGTCTCTGATGCTTTGGATCTCTCTC
JMFS111H05+ GCTACGCTGTTGTCTTGCCTGATTTTCTTAACCTTGTCTCTGATGCTTTGGATCTCTCTC
JMFS135A03+ GCTACGCTGTTGTCTTGCCTGATTTTCTTAACCTTGTCTCTGATGCTTTGGATCTCTCTC
JMFS164F10+ GCTACGCTGTTGTCTTGCCTGATTTTCTTAACCTTGTCTCTGATGCTTTGGATCTCTCTC
JMFS164B08+ GCTACGCTGTTGTCTTGCCTGATTTTCTTAACCTTGTCTCTGATGCTTTGGATCTCTCTC
JMFS065H11+ GCTACGCTGTTGTCTTGCCTGATTTTCTTAACCTTGTCTCTGATGCTTTGGATCTCTCTC
____________________________________________________________
consensus GCTACGCTGTTGTCTTGCCTGATTTTCTTAACCTTGTCTCTGATGCTTTGGATCTCTCTC
. : . : . : . : . : . :
JMSF045O09+ GCAGAAACGTTAACCTTGGCGTAATAAGCAAGTGTTTCCAAGTATCTGAGCACCCCTTTG
JMSF038C24+ GCAGAAACGTTAACCTTGGCGTAATAAGCAAGTGTTTCCAAGTATCTGAGCACCCCTTTG
JMSF030M22+ GCAGAAACGTTAACCTTGGCGTAATAAGCAAGTGTTTCCAAGTATCTGAGCACCCCTTTG
JMFS098B12+ GCAGAAACGTTAACCTTGGCGTAATAAGCAAGTGTTTCCAAGTATCTGAGCACCCCTTTG
JMFS111H05+ GCAGAAACGTTAACCTTGGCGTAATAAGCAAGTGTTTCCAAGTATCTGAGCACCCCTTTG
JMFS135A03+ GCAGAAACGTTAACCTTGGCGTAATAAGCAAGTGTTTCCAAGTATCTGAGCACCCCTTTG
JMFS164F10+ GCAGAAACGTTAACCTTGGCGTAATAAGCAAGTGTTTCCAAGTATCTGAGCACCCCTTTG
JMFS164B08+ GCAGAAACGTTAACCTTGGCGTAATAAGCAAGTGTTTCCAAGTATCTGAGCACCCCTTTG
JMFS065H11+ GCAGAAACGTTAACCTTGGCGTAATAAGCAAGTGTTTCCAAGTATCTGAGCACCCCTTTG
____________________________________________________________
consensus GCAGAAACGTTAACCTTGGCGTAATAAGCAAGTGTTTCCAAGTATCTGAGCACCCCTTTG
. : . : . : . : . : . :
JMSF045O09+ TCTTTATACTTCTTCCTCTCCACCGTGAACTTCCCGATGGCGTCTTCCGCCTCAATCACC
JMSF038C24+ TCTTTATACTTCTTCCTCTCCACCGTGAACTTCCCGATGGCGTCTTCCGCCTCAATCACC
JMSF030M22+ TCTTTATACTTCTTCCTCTCCACCGTGAACTTCCCGATGGCGTCTTCCGCCTCAATCACC
JMFS098B12+ TCTTTATACTTCTTCCTCTCCACCGTGAACTTCCCGATGGCGTCTTCCGCCTCAATCACC
JMFS111H05+ TCTTTATACTTCTTCCTCTCCACCGTGAACTTCCCGATGGCGTCTTCCGCCTCAATCACC
JMFS135A03+ TCTTTATACTTCTTCCTCTCCACCGTGAACTTCCCGATGGCGTCTTCCGCCTCAATCACC
JMFS164F10+ TCTTTATACTTCTTCCTCTCCACCGTGAACTTCCCGATGGCGTCTTCCGCCTCAATCACC
JMFS164B08+ TCTTTATACTTCTTCCTCTCCACCGTGAACTTCCCGATGGCGTCTTCCGCCTCAATCACC
JMFS065H11+ TCTTTATACTTCTTCCTCTCCACCGTGAACTTCCCGATGGCGTCTTCCGCCTCAATCACC
____________________________________________________________
consensus TCTTTATACTTCTTCCTCTCCACCGTGAACTTCCCGATGGCGTCTTCCGCCTCAATCACC
. : . : . : . : . : . :
JMSF045O09+ ACGTTTCGGATCTTCTCCACCACGTCGTTCAGGACTTCATTGTCGCCGGCGCTTTGGTTC
JMSF038C24+ ACGTTTCGGATCTTCTCCACCACGTCGTTCAGGACTTCATTGTCGCCGGCGCTTTGGTTC
JMSF030M22+ ACGTTTCGGATCTTCTCCACCACGTCGTTCAGGACTTCATTGTCGCCGGCGCTTTGGTTC
JMFS098B12+ ACGTTTCGGATCTTCTCCACCACGTCGTTCAGGACTTCATTGTCGCCGGCGCTTTGGTTC
JMFS111H05+ ACGTTTCGGATCTTCTCCACCACGTCGTTCAGGACTTCATTGTCGCCGGCGCTTTGGTTC
JMFS135A03+ ACGTTTCGGATCTTCTCCACCACGTCGTTCAGGACTTCATTGTCGCCGGCGCTTTGGTTC
JMFS164F10+ ACGTTTCGGATCTTCTCCACCACGTCGTTCAGGACTTCATTGTCGCCGGCGCTTTGGTTC
JMFS164B08+ ACGTTTCGGATCTTCTCCACCACGTCGTTCAGGACTTCATTGTCGCCGGCGCTTTGGTTC
JMFS065H11+ ACGTTTCGGATCTTCTCCACCACGTCGTTCAGGACTTCATTGTCGCCGGCGCTTTGGTTC
JMSF005C12+ ACGTCGTTCAGGACTTCATTGTCGCCGGCGCTTTGGTTC
____________________________________________________________
consensus ACGTTTCGGATCTTCTCCACCACGTCGTTCAGGACTTCATTGTCGCCGGCGCTTTGGTTC
. : . : . : . : . : . :
JMSF045O09+ TTCGACGCTTGCTTCAGATATGCGTTGAACGTTTTCAGGTCGGACACTA
JMSF038C24+ TTCGACGCTTGCTTCAGATATGCGTTGAACGTTTTCAGGTCGGACACTAGGTCGTCGATC
JMSF030M22+ TTCGACGCTTGCTTCAGATATGCGTTGAACGTTTTCAGGTCGGACACTAGGTCGTCGATC
JMFS098B12+ TTCGACGCTTGCTTCAGATATGCGTTGAACGTTTTCAGGTCGGACACTAGGTCGTCGATC
JMFS111H05+ TTCGACGCTTGCTTCAGATATGCGTTGAACGTTTTCAGGTCGGACACTAGGTCGTCGATC
JMFS135A03+ TTCGACGCTTGCTTCAGATATGCGTTGAACGTTTTCAGGTCGGACACTAGGTCGTCGATC
JMFS164F10+ TTCGACGCTTGCTTCAGATATGCGTTGAACGTTTTCAGGTCGGACACTAGGTCGTCGATC
JMFS164B08+ TTCGACGCTTGCTTCAGATATGCGTTGAACGTTTTCAGGTCGGACACTAGGTCGTCGATC
JMFS065H11+ TTCGACGCTTGCTTCAGATATGCGTTGAACGTTTTCAGGTCGGACACTAGGTCGTCGATC
JMSF005C12+ TTCGACGCTTGCTTCAGATATGCGTTGAACGTTTTCAGGTCGGACACTAGGTCGTCGATC
____________________________________________________________
consensus TTCGACGCTTGCTTCAGATATGCGTTGAACGTTTTCAGGTCGGACACTAGGTCGTCGATC
. : . : . : . : . : . :
JMSF038C24+ TGATCTTTTATCCCGATTATTAGCGCCGCGTTTTCCTCTACTGCTTGTGCTAGCCGGCTC
JMSF030M22+ TGATCTTTTATCCCGATTATTAGCGCCGCGTTTTCCTCTACTGCTTGTGCTAGCCGGCTC
JMFS098B12+ TGATCTTTTATCCCGATTATTAGCGCCGCGTTTTCCTCTACTGCTTGTGCTAGCCGGCTC
JMFS111H05+ TGATCTTTTATCCCGATTATTAGCGCCGCGTTTTCCTCTACTGCTTGTGCTAGCCGGCTC
JMFS135A03+ TGATCTTTTATCCCGATTATTAGCGCCGCGTTTTCCTCTACTGCTTGTGCTAGCCGGCTC
JMFS164F10+ TGATCTTTTATCCCGATTATTAGCGCCGCGTTTTCCTCTACTGCTTGTGCTAGCCGGCTC
JMFS164B08+ TGAT-TTTTATCCCGATTATTAGCGCCGCGTTTTCCTCTACTGCTTGTGCTAGCCGGCTC
JMFS065H11+ TGATCTTTTATCCCGATTATTAGCGCCGCGTTTTCCTCTACTGCTTGTGCTAGCCGGCTC
JMSF005C12+ TGATCTTTTATCCCGATTATNAGCGCCGCGTTTTCCTCTACTGCTTGTGCTAGCCGGCTC
____________________________________________________________
consensus TGATCTTTTATCCCGATTATTAGCGCCGCGTTTTCCTCTACTGCTTGTGCTAGCCGGCTC
. : . : . : . : . : . :
JMSF038C24+ ACCAGCTCCCCTACTACTGCATC
JMSF030M22+ ACCAGCTCCCCTACTACTGCATC
JMFS098B12+ ACCAGCTCCCCTACTACTGCATCTGCAACCACCGCCATAGCTCAGCTCAGATCAGATCAA
JMFS111H05+ ACCAGCTCCCCTACTACTGCATCTGCAACCACCGCCATAGCTCAGCTCAGATCAGATCAA
JMFS135A03+ ACCAGCTCCCCTACTACTGCATCTGCAACCACCGCCATAGCTCAGCTCAGATCAGATCAA
JMFS164F10+ ACCAGCTCCCCTACTACTGCATCTGCAACCACCGCCATAGCTCAGCTCAGATCAGATCAA
JMFS164B08+ ACCAGCTCCCCTACTACTGCATCTGCAACCACCGCCATAGCTCAGCTCAGATCAGATCAA
JMFS065H11+ ACCAGCTCCCCTACTACTGCATCTGCAACCACCGCCATAGCTCAGCTCAGATCAGATCAA
JMSF005C12+ ACCAGCTCCCCTACTACTGCATCTGCAACCACCGCCATAGCTCAGCTCAGATCAGATCAA
____________________________________________________________
consensus ACCAGCTCCCCTACTACTGCATCTGCAACCACCGCCATAGCTCAGCTCAGATCAGATCAA
. : . : . : . : . : . :
JMFS098B12+ ATCTCCAGCAATACACACTCAACTAAGGGCGGAGACTTTA
JMFS111H05+ ATCTCCAGCAATACACACTCAACTAAGGGCGGAGACTTTAGCTTCCATGTTT
JMFS135A03+ ATCTCCAGCAATACACACTCAACTAAGGGCGGAGACT
JMFS164F10+ ATCTCCAGCAATACACACTCAACTAAGGGCGGAGACTTTAGCTTCC
JMFS164B08+ ATCTCCAGCAATACACACTCAACTAAGGGCGGAGACTTTAGCTTCCATGTTT
JMFS065H11+ ATCTCCAGCAATACACACTCAACTAAGGGCGGAGACTTTAGCTTCCATGTTTTC
JMSF005C12+ ATCTCCAGCAATACACACTCAACTAAGGGCGGAGACTTTAGCTTCCATGTTTTCTTGACC
____________________________________________________________
consensus ATCTCCAGCAATACACACTCAACTAAGGGCGGAGACTTTAGCTTCCATGTTTTCTTGACC