Contig 009183:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS019D11+                                GTTGAAGCAGCTGTAAACAACTCGTGACAAACAGGAAAA
JMFS156E04+                                     AGCAGCTGTAAACAACTCGTGACAAACAGGAAAA
                      ____________________________________________________________
consensus                                  GTTGAAGCAGCTGTAAACAACTCGTGACAAACAGGAAAA
 
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JMFS019D11+           AACACATCACTCGTGCCCCTCCATGATTTACCACAAAACCACTTAAAAGCTTCTCCAGAA
JMFS156E04+           AACACATCACTCGTGCCCCTCCATGATTTACCACAAAACCACTTAAAAGCTTCTCCAGAA
                      ____________________________________________________________
consensus             AACACATCACTCGTGCCCCTCCATGATTTACCACAAAACCACTTAAAAGCTTCTCCAGAA
 
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JMFS019D11+           ACAGCAAAACCGCCTGGCTTTATCGCTAAAACCACCCACCACTCTCGCTATGAAGCAAAT
JMFS156E04+           ACAGCAAAACCGCCTGGCTTTATCGCTAAAACCACCCACCACTCTCGCTATGAAGCAAAT
                      ____________________________________________________________
consensus             ACAGCAAAACCGCCTGGCTTTATCGCTAAAACCACCCACCACTCTCGCTATGAAGCAAAT
 
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JMFS019D11+           GAGTTGAGCTCCGGCTCCGGACTGCCAAAAAAACAAAAAAAAAACAAAAAAACAAAAAAC
JMFS156E04+           GAGTTGAGCTCCGGCTCCGGACTGCCAAAAAAACAAAAAAAAAACAAAAAAACAAAAAAC
                      ____________________________________________________________
consensus             GAGTTGAGCTCCGGCTCCGGACTGCCAAAAAAACAAAAAAAAAACAAAAAAACAAAAAAC
 
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JMFS019D11+           AAAAAACAAAAAAAAAAAATCCACAAACAAAATTTGAAAAAAAAACCCAAAAAAGTTATC
JMSF041K09+                    AAAAAAAAAATNCCCAAACAAAATTTGNAAAAAAAACCCAAAAAAGTTATC
JMFS156E04+           AAAAAACAAAAAAAAAAAATCCACAAACAAAATTTGAAAAAAAAACCCAAAAAAGTTATC
JMSF050F19+            AAAACCAAAAAAAAAAAATCCCCNAACAAAATTTGAAAAAAAAACCCAAAAAAGTTATC
                      ____________________________________________________________
consensus             AAAAAACAAAAAAAAAAAATCCCCAAACAAAATTTGAAAAAAAAACCCAAAAAAGTTATC
 
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JMFS019D11+           GTTCAGTGATTTACAGCAAGACTAAAAATGAAGCTCCCAGACCCAGAAAAGGAAAACACA
JMSF041K09+           GTTCAGTGATTTACAGCAAGANTAAAAANGAAGCTCCCAGACCCNGAAAAGGAAAACACA
JMFS156E04+           GTTCAGTGATTTACAGCAAGACTAAAAATGAAGCTCCCAGACCCAGAAAAGGAAAACACA
JMSF050F19+           GTTCAGTGATTTACAGCAAGACTAAAAATGAAGCTCCCAGACCCAGAAAAGGAAAACACA
JMSF004I23+                              GACTAAAAATGAAGCTCCCAGACCCAGAAAAGGAAAACACA
                      ____________________________________________________________
consensus             GTTCAGTGATTTACAGCAAGACTAAAAATGAAGCTCCCAGACCCAGAAAAGGAAAACACA
 
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JMFS019D11+           AAATACAGCAAGATTGAAACTTTTCCCTCCCCATTCCACTCTAGTCCAGCAGAAGAAAGA
JMSF041K09+           AAATACAGCAAGATTGAAACTTTTCCCTCCCCATTCCACTNTAGTCCA            
JMFS156E04+           AAATACAGCAAGATTGAAACTTTTCCCTCCCCATTCCACTCTAGTCCAGCAGAAGAAAGA
JMSF050F19+           AAATACAGCAAGATTGAAACTTTTCCCTCCCCATTCCACTCTAGTCCAGCAGAAGAAAGA
JMSF004I23+           AAATACAGCAAGATTGAAACTTTTCCCTCCCCATTCCACTCTAGTCCAGCAGAAGAAAGA
                      ____________________________________________________________
consensus             AAATACAGCAAGATTGAAACTTTTCCCTCCCCATTCCACTCTAGTCCAGCAGAAGAAAGA
 
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JMFS019D11+           AGTGGGTGAAAAAAAGATCCGTTTTTTTTCAGCAAGAAACGGAAACCCTCATACGCACAT
JMFS156E04+           AGTGGGTGAAAAAAAGATCCGTTTTTTTTCAGCAAGAAACGGAAACCCTCATACGCACAT
JMSF050F19+           AGTGGGTGAAAAAAAGATCCGTTTTTTTTTAGCAAGAAACGGAAACCCTCATACGCACAT
JMSF004I23+           AGTGGGTGAAAAAAAGATCCGTTTTTTTTCAGCAAGAAACGGAAACCCTCATACGCACAT
                      ____________________________________________________________
consensus             AGTGGGTGAAAAAAAGATCCGTTTTTTTTCAGCAAGAAACGGAAACCCTCATACGCACAT
 
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JMFS019D11+           TCAAGAAAATACGAGTATATACCAAGTTCGGAGAGGAGAGAGAGAGTGATGCGTCGTCTT
JMFS156E04+           TCAAGAAAATACGAGTATATACCAAGTTCGGAGAGGAGAGAGAGAGTGATGCGTCGTCTT
JMSF050F19+           TCAAGAAAATACGAGTATATACCAAGTTCGGAGAGGAGAGAGAGAGTGATGCGTCGTCTT
JMSF004I23+           TCAAGAAAATACGAGTATATACCAAGTTCGGAGAGGAGAGAGAGAGTGATGCGTCGTCTT
                      ____________________________________________________________
consensus             TCAAGAAAATACGAGTATATACCAAGTTCGGAGAGGAGAGAGAGAGTGATGCGTCGTCTT
 
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JMFS156E04+           GTATGGGGTTAGTGCGTAGAGAGAGAGAGA                              
JMSF050F19+           GTATGGGGTTAGTGCGTAGAGAGAGAGAGAGAGAGAAAAGAAAGAGAGGTTTAAA     
JMSF004I23+           GTATGGGGTTAGTGCGTAGAGAGAGAGAGAGAGAGAAAAGAAAGAGAGGTTTAAAGCTTC
                      ____________________________________________________________
consensus             GTATGGGGTTAGTGCGTAGAGAGAGAGAGAGAGAGAAAAGAAAGAGAGGTTTAAAGCTTC