Contig 009177:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF003K01-                                                            GCATAGATTC
                      ____________________________________________________________
consensus                                                               GCATAGATTC
 
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rJMSF003K01-          CTACTAATGCATGCATGGCTGCTAACATTACAATAATTATACTCTCACACTTGTCACAAC
                      ____________________________________________________________
consensus             CTACTAATGCATGCATGGCTGCTAACATTACAATAATTATACTCTCACACTTGTCACAAC
 
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rJMSF003K01-          ACCAACAAATTACAAAACGAACAATAATTTTATATACATAAAACTATCTAACACTATTAA
rJMFF021K22-                        AAACGAACAATAATTTTATATACATAAAACTATCTAACACTATTAA
                      ____________________________________________________________
consensus             ACCAACAAATTACAAAACGAACAATAATTTTATATACATAAAACTATCTAACACTATTAA
 
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rJMSF003K01-          AAATCAAGATTCTCGTCAAATTTAGGTATCACGTACTCTACAACTGTCTCTCCCTTCAAC
rJMFF021K22-          AAATCAAGATTCTCGTCAAATTTAGGTATCACGTACTCTACAACTGTCTCTCCCTTCAAC
                      ____________________________________________________________
consensus             AAATCAAGATTCTCGTCAAATTTAGGTATCACGTACTCTACAACTGTCTCTCCCTTCAAC
 
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rJMSF003K01-          TCAAGGAATGCACCACATGGCTAACTTCTTTCTCGATCTTTGGTGTTGTGTAATTAATGT
rJMFF021K22-          TCAAGGAATGCACCACATGGCTAACTTCTTTCTCGATCTTTGGTGTTGTGTAATTAATGT
                      ____________________________________________________________
consensus             TCAAGGAATGCACCACATGGCTAACTTCTTTCTCGATCTTTGGTGTTGTGTAATTAATGT
 
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rJMSF003K01-          GTGAGTTTTCAAGCACGCTAAGCCTCGGCTTTTGTACTGTATTTCTTTGAAAAATTTCTC
rJMFF021K22-          GTGAGTTTTCAAGCACGCTAAGCCTCGGCTTTTGTACTGTATTTCTTTGAAAAATTTCTC
                      ____________________________________________________________
consensus             GTGAGTTTTCAAGCACGCTAAGCCTCGGCTTTTGTACTGTATTTCTTTGAAAAATTTCTC
 
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rJMSF003K01-          GGGTTCTTTGTTCAACAGATCAGAGTTATCCCATAACCTATAACATCTTTTTTGCATGCA
rJMFF021K22-          GGGTTCTTTGTTCAACAGATCAGAGTTATCCCATAACCTATAACATCTTTTTTGCATGCA
JMFF021K22+                    GTTCAACAGATCAGAGTTATCCCATAACCTATAACATCTTTTTTGCATGCA
                      ____________________________________________________________
consensus             GGGTTCTTTGTTCAACAGATCAGAGTTATCCCATAACCTATAACATCTTTTTTGCATGCA
 
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rJMSF003K01-          TGGTGTTAAACTTACCCAACAATGTTAGTAGAACAAGTTGTATGTATATAGTCCCAACTT
rJMFF021K22-          TGGTGTTAAACTTACCCAACAATGTTAGTAGAACAAGTTGTATGTATATAGTCCCAACTT
JMFF021K22+           TGGTGTTAAACTTACCCAACAATGTTAGTAGAACAAGTTGTATGTATATAGTCCCAACTT
                      ____________________________________________________________
consensus             TGGTGTTAAACTTACCCAACAATGTTAGTAGAACAAGTTGTATGTATATAGTCCCAACTT
 
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rJMSF003K01-          TGAGTAAATACATACAAGTTAAGATCCTCGAATCCTTGGTAGCTTAGTCTTCTTAGTCTC
rJMFF021K22-          TGAGTAAATACATACAAGTTAAGATCCTCGAATCCTTGGTAGCTTAGTCTTCTTAGTCTC
JMFF021K22+           TGAGTAAATACATACAAGTTAAGATCCTCGAATCCTTGGTAGCTTAGTCTTCTTAGTCTC
                      ____________________________________________________________
consensus             TGAGTAAATACATACAAGTTAAGATCCTCGAATCCTTGGTAGCTTAGTCTTCTTAGTCTC
 
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rJMSF003K01-          ACCATGCATTATATTCATGGCTTGTCAAGCTCTCCTTTATAAACTCGGCCTGGAGACCGT
rJMFF021K22-          ACCATGCATTATATTCATGGCTTGTCAAGCTCTCCTTTATAAACTCGGCCTGGAGACCGT
JMFF021K22+           ACCATGCATTATATTCATGGCTTGTCAAGCTCTCCTTTATAAACTCGGCCTGGAGACCGT
                      ____________________________________________________________
consensus             ACCATGCATTATATTCATGGCTTGTCAAGCTCTCCTTTATAAACTCGGCCTGGAGACCGT
 
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rJMSF003K01-          CGGGAGTTTCCCGCTCTTCTGTTATGGATAGGGTCAGGTCCATTTGGAACCTTTCTTTTG
rJMFF021K22-          CGGGAGTTTCCCGCTCTTCTGTTATGGATAGGGTCAGGTCCATTTGGAACCTTTCTTTTG
JMFF021K22+           CGGGAGTTTCCCGCTCTTCTGTTATGGATAGGGTCAGGTCCATTTGGAACCTTTCTTTTG
                      ____________________________________________________________
consensus             CGGGAGTTTCCCGCTCTTCTGTTATGGATAGGGTCAGGTCCATTTGGAACCTTTCTTTTG
 
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rJMSF003K01-          CTCATGAAATTGAGATCTGTATGAACACTACTTGCAGGCTTCTCATTATCACCATCTTTT
rJMFF021K22-          CTCATGAAATTGAGATCTGTATGAACACTACTTGCAGGCTTCTCATTATCACCATCTTTT
JMFF021K22+           CTCATGAAATTGAGATCTGTATGAACACTACTTGCAGGCTTCTCATTATCACCATCTTTT
JMSF003K01+                      GAGATCTGTATGAACACTACTTGCAGGCTTCTCATTATCACCATCTTTT
                      ____________________________________________________________
consensus             CTCATGAAATTGAGATCTGTATGAACACTACTTGCAGGCTTCTCATTATCACCATCTTTT
 
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rJMSF003K01-          TGCATGCTCATATGCTTCANGTTTCCTCCTTCTCTTTCTCTACNATGTTGATGAT     
rJMFF021K22-          TGCATGCTCATATGCTTCATGTTTCCTCCTTCTCTTTCTCTACTATGTTGATGATGATGA
JMFF021K22+           TGCATGCTCATATGCTTCATGTTTCCTCCTTCTCTTTCTCTACTATGTTGATGATGATGA
JMSF003K01+           TGCATGCTCATATGCTTCATGTTTCCTCCTTCTCTTTCTCTACTATGTTGATGATGATGA
                      ____________________________________________________________
consensus             TGCATGCTCATATGCTTCATGTTTCCTCCTTCTCTTTCTCTACTATGTTGATGATGATGA
 
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rJMFF021K22-          TGATGANGTTTC                                                
JMFF021K22+           TGATGAGGTTTCGTCGTCGTCTCCTCCATATTTAAAGCTCCAACCACCAATAACCCAACC
JMSF003K01+           TGATGAGGTTTCGTCGTCGTCTCCTCCATATTTAAAGCTCCAACCACCAATAACCCAACC
                      ____________________________________________________________
consensus             TGATGAGGTTTCGTCGTCGTCTCCTCCATATTTAAAGCTCCAACCACCAATAACCCAACC
 
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JMFF021K22+           AGTCCTACCAATAACAGTGAACCATAAAAGGAAACCTTCCTACTCCTCAAATTACTACCC
JMSF003K01+           AGTCCTACCAATAACAGTGAACCATAAAAGGAAACCTTCCTACTCCTCAAATTACTACCC
                      ____________________________________________________________
consensus             AGTCCTACCAATAACAGTGAACCATAAAAGGAAACCTTCCTACTCCTCAAATTACTACCC
 
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JMFF021K22+           A                                                           
JMSF003K01+           ATAACTTTTTTTTTTCTCTCTCTCTCTCTCTATATTATGTATGAAAGGGGGAGAGAGAGA
                      ____________________________________________________________
consensus             ATAACTTTTTTTTTTCTCTCTCTCTCTCTCTATATTATGTATGAAAGGGGGAGAGAGAGA
 
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JMSF003K01+           AAATTAAACCAGGATTTTAGTTGAAATATTGGTAGGTATAGTAGTAGATGAAGATGAAGA
                      ____________________________________________________________
consensus             AAATTAAACCAGGATTTTAGTTGAAATATTGGTAGGTATAGTAGTAGATGAAGATGAAGA
 
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JMSF003K01+           GGATGCTAGCTATCTAGTACTGTAGTGTTTGGCTTTGAAGGATGGATTTTACTTACATCC
                      ____________________________________________________________
consensus             GGATGCTAGCTATCTAGTACTGTAGTGTTTGGCTTTGAAGGATGGATTTTACTTACATCC