Contig 009176:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003G22Sequence566009176 (2)ref|XP_002263396.3|3e-81PREDICTED: uncharacterized protein At4g26485 [Vitis vinifera]750021215ref|XP_002263396.3|1e-52PREDICTED: uncharacterized protein At4g26485 [Vitis vinifera]
JMSF003I16Sequence357009176 (2)ref|XP_006470597.1|4e-33PREDICTED: uncharacterized protein At4g26485-like [Citrus sinensis] gb|KDO61280.776020279ref|XP_002263396.3|2e-22PREDICTED: uncharacterized protein At4g26485 [Vitis vinifera]

Alignment

This contig is upended


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JMFF003G22+                                                             ATTCTTGAAA
                      ____________________________________________________________
consensus                                                               ATTCTTGAAA
 
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JMFF003G22+           TCAACACAATCGATCAAAACCAAAGAACTCATTGATGCCAATTCAGCAAGATTCCAGCGA
                      ____________________________________________________________
consensus             TCAACACAATCGATCAAAACCAAAGAACTCATTGATGCCAATTCAGCAAGATTCCAGCGA
 
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JMFF003G22+           CCGAATGGCCCTGTTGTTTTGTGGTTGACATGAATTTCACCATACGGTCGGAGCATGCCA
                      ____________________________________________________________
consensus             CCGAATGGCCCTGTTGTTTTGTGGTTGACATGAATTTCACCATACGGTCGGAGCATGCCA
 
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JMFF003G22+           CTTGCATTCCTAAAGAACCCACTGATAAGATTCCTGTGCATTTGGATAAGATGGATGTTA
                      ____________________________________________________________
consensus             CTTGCATTCCTAAAGAACCCACTGATAAGATTCCTGTGCATTTGGATAAGATGGATGTTA
 
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JMFF003G22+           TCTTCCTTCCCATAGAAACCTGCATGGGGGAAATTAAACATAATGCGGTCGAATTTCCTC
                      ____________________________________________________________
consensus             TCTTCCTTCCCATAGAAACCTGCATGGGGGAAATTAAACATAATGCGGTCGAATTTCCTC
 
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JMFF003G22+           ATCCGGAGATCAGTATGCTGCTTCATTTTGATAGCATTCACTTCATGCAAAATTGTGGCT
JMSF003I16+              CGGAGATCAGTATGCAGCTTCATGTTGATAGCATCCACTCGATGCAAAATTGTGGCT
                      ____________________________________________________________
consensus             ATCCGGAGATCAGTATGCTGCTTCATTTTGATAGCATTCACTTGATGCAAAATTGTGGCT
 
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JMFF003G22+           CCCAAATGCCACAATTTTTCTAAGTTCGATTTTGCATTCTTGTACTTTTTTGTCACCATA
JMSF003I16+           CCTAAACGTCGCAATTTCTTTAAGTTTGATTCTGCATTCTTGTACTTTTTTGTCACCTTA
                      ____________________________________________________________
consensus             CCTAAATGTCGCAATTTTTTTAAGTTTGATTTTGCATTCTTGTACTTTTTTGTCACCTTA
 
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JMFF003G22+           TCGTAAGAATCGAGAGAAGAAGCGAGAATGTTAGAAGCAGAGGCAAAAGAGTTGGCCAAA
JMSF003I16+           CCGTAAGAATCGAGAGAAGAAGCGAGAATGTTAGAAGCGGAGCCAAAAGAGTTGGCCAAA
                      ____________________________________________________________
consensus             TCGTAAGAATCGAGAGAAGAAGCGAGAATGTTAGAAGCGGAGGCAAAAGAGTTGGCCAAA
 
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JMFF003G22+           CACACAGAAAAAGAGAAGTCTCCATCGCCCACTAGAAGAATCTGATGAAGTGAGGAGTAA
JMSF003I16+           CACAGAGAAAAAGAGAAGTCTCCATCGCCCACTAGAAGAATCTGATGAAGTGAGGAGTAA
                      ____________________________________________________________
consensus             CACAGAGAAAAAGAGAAGTCTCCATCGCCCACTAGAAGAATCTGATGAAGTGAGGAGTAA
 
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JMFF003G22+           TGCATCAGCCATCTCTCTTCGCATTCTTGCTGTTGTAATACCATTTTC            
JMSF003I16+           TGCATCAGCCATTTCTCTTCGCATTCTTGCTGTTGTAATACCATTTTCCCTCTTTTTTTG
                      ____________________________________________________________
consensus             TGCATCAGCCATTTCTCTTCGCATTCTTGCTGTTGTAATACCATTTTCCCTCTTTTTTTG
 
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JMSF003I16+           AGGTTGAGGATGACAGTGGCAGCCTGCAGTTCCCCCCCGGCCCCCAATCAAAATTTCTTC
                      ____________________________________________________________
consensus             AGGTTGAGGATGACAGTGGCAGCCTGCAGTTCCCCCCCGGCCCCCAATCAAAATTTCTTC