Contig 009175:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN008B06Sequence609009175 (2)ref|XP_011100067.1|2e-80PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein At4g3
JMSF003H03Sequence381009175 (2)ref|XP_003531343.1|4e-22PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein At4g3743001240 (11)emb|CDP12041.1|1e-124unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFN008B06+                                  AGCAGCCTTGGTTTCATCCATCAATCTCAAAACTCCT
                      ____________________________________________________________
consensus                                    AGCAGCCTTGGTTTCATCCATCAATCTCAAAACTCCT
 
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JMFN008B06+           GGTCTAGGCTTAACAGTTCCAGATTTGATAATCTGTTTGTATCTTTCAGTCTTCCAATCT
                      ____________________________________________________________
consensus             GGTCTAGGCTTAACAGTTCCAGATTTGATAATCTGTTTGTATCTTTCAGTCTTCCAATCT
 
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JMFN008B06+           TGAAGAATGTCAATTAGCTTGGTTCTATCGGCATCGTCTTCCGGAGGCTTATCAGAGATT
                      ____________________________________________________________
consensus             TGAAGAATGTCAATTAGCTTGGTTCTATCGGCATCGTCTTCCGGAGGCTTATCAGAGATT
 
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JMFN008B06+           GTAGACGTCGGCCATCCGTGCTCCTTAAAATACCATCGCATTTTAGGTTTGCCACCGCCG
                      ____________________________________________________________
consensus             GTAGACGTCGGCCATCCGTGCTCCTTAAAATACCATCGCATTTTAGGTTTGCCACCGCCG
 
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JMFN008B06+           ATTCGGTTCTGGAGATCATCGTAGAATTCGACACCCCAATTCAGCGGCTCAGAAGAAGGG
JMSF003H03+                                                  TTCAGCGGCTCAGAAGAAGGG
                      ____________________________________________________________
consensus             ATTCGGTTCTGGAGATCATCGTAGAATTCGACACCCCAATTCAGCGGCTCAGAAGAAGGG
 
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JMFN008B06+           GAAGACGGGCAGCGGACATTGAAGTGAGAGAAAGCGTCGTTATAGGCTTGCCGGTGGAGG
JMSF003H03+           GAAGACGGGCAGCGGACATTGAAGTGAGAGAAAGCGTCGTTATAGGCTTGCCGGTGGAGG
                      ____________________________________________________________
consensus             GAAGACGGGCAGCGGACATTGAAGTGAGAGAAAGCGTCGTTATAGGCTTGCCGGTGGAGG
 
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JMFN008B06+           TGCTCCGACTCCAAAATAACGCCATCGCAGTCGAAGATCAGAGCGTCTAGCGCACGCCCC
JMSF003H03+           TGCTCCGACTCCAAAATAACGCCATCGCAGTCGAAGATCAGAGCGTCTAGCGCACGTCCC
                      ____________________________________________________________
consensus             TGCTCCGACTCCAAAATAACGCCATCGCAGTCGAAGATCAGAGCGTCTAGCGCACGTCCC
 
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JMFN008B06+           GAAGAAGCCGAAGCCGAAACCGAGAGGCGTTTTACGCGGGAAGAGAGCGGCTGGGTTCTG
JMSF003H03+           GAAGAAGCCGAAGCCGAAACCGAGAGGCGTTTTACGCGGGAAGAGAGCGGCTGGGTTCTG
                      ____________________________________________________________
consensus             GAAGAAGCCGAAGCCGAAACCGAGAGGCGTTTTACGCGGGAAGAGAGCGGCTGGGTTCTG
 
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JMFN008B06+           AGGCCGGAAGCCCTCGCGACTGGAATAGAGAAGAGAAAGTTGGAAGAAGACGAGAGTGAT
JMSF003H03+           AGGCCGGAAGCCCTCGCGACTGGAATAGAGAAGAGAAAGTTGGAAGAAGACGAGAGTGAT
                      ____________________________________________________________
consensus             AGGCCGGAAGCCCTCGCGACTGGAATAGAGAAGAGAAAGTTGGAAGAAGACGAGAGTGAT
 
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JMFN008B06+           GGATTGGGTGGAGGAGAGAGAAGCGCCGTACACGCCGCCATAGCTGCGACTGTCCACTCA
JMSF003H03+           GGATTGGGTGGAGGAGAGAGAAGCGCCGTACACGCCGCCATAGCTGCGACTGTCCACTCA
                      ____________________________________________________________
consensus             GGATTGGGTGGAGGAGAGAGAAGCGCCGTACACGCCGCCATAGCTGCGACTGTCCACTCA
 
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JMFN008B06+           CCACGGCGGTGATGGTTTGGGGATTTGGCGGG                            
JMSF003H03+           CCACGGCGGTGATGGTTTGGGGATTTGGCGGGTATGGTTCGAGTGGCTATGGGCAAATTC
                      ____________________________________________________________
consensus             CCACGGCGGTGATGGTTTGGGGATTTGGCGGGTATGGTTCGAGTGGCTATGGGCAAATTC