Contig 009174:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN019J22+                                                  GGAGTGAGTATGTTGATATTG
                      ____________________________________________________________
consensus                                                    GGAGTGAGTATGTTGATATTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN019J22+           CACATATCCATTGCTCTCGGACCCTTGATCTCGGCTACTTTTATGTCCAAGAAATCATTA
                      ____________________________________________________________
consensus             CACATATCCATTGCTCTCGGACCCTTGATCTCGGCTACTTTTATGTCCAAGAAATCATTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN019J22+           GGAGGAGTAGAGGGGAATGAACTCAACCCAATCATGCTTAGGAAGTGATTGCCTTTATTT
                      ____________________________________________________________
consensus             GGAGGAGTAGAGGGGAATGAACTCAACCCAATCATGCTTAGGAAGTGATTGCCTTTATTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN019J22+           GATGTCTTTGGAATCGGTTCCATTCTCTTTGAAAATCTGGCTACTTGGCTTGGAAGTCCA
                      ____________________________________________________________
consensus             GATGTCTTTGGAATCGGTTCCATTCTCTTTGAAAATCTGGCTACTTGGCTTGGAAGTCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN019J22+           ACATCCTTTCGTCCATGCATGCATGCCTCATCGCTGTTCACCAGCACCCTGGCAGCCCAT
JMFF048E16+                                     CTCATCGCTGTTCACCAGCACCCTGGCAGCCCAT
                      ____________________________________________________________
consensus             ACATCCTTTCGTCCATGCATGCATGCCTCATCGCTGTTCACCAGCACCCTGGCAGCCCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN019J22+           GCGCAAGACGTAGGTGGGTTCCACACAATTCCCGCAAGTACCACAAGCTCGTCAAAAGTT
JMFF048E16+           GCGCAAGACGTAGGTGGGTTCCACACAATTCCCGCAAGTACCACAAGCTCGTCAAAAGTT
                      ____________________________________________________________
consensus             GCGCAAGACGTAGGTGGGTTCCACACAATTCCCGCAAGTACCACAAGCTCGTCAAAAGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN019J22+           CCAGCAGGACTGTCATCATAACTAGCAAGGAAGAATCCACCTAGAGTATATCCGAAAGCC
JMFF048E16+           CCAGCAGGACTGTCATCATAACTAGCAAGGAAGAATCCACCTAGAGTATATCCGAAAGCC
                      ____________________________________________________________
consensus             CCAGCAGGACTGTCATCATAACTAGCAAGGAAGAATCCACCTAGAGTATATCCGAAAGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN019J22+           TCAACTAATCTGAACTCTTTAGGAATGAAAGCTCGAGCTGTCTTCGATTTGACAAGATGT
JMFF048E16+           TCAACTAATCTGAACTCTTTAGGAATGAAAGCTCGAGCTGTCTTCGATTTGACAAGATGT
                      ____________________________________________________________
consensus             TCAACTAATCTGAACTCTTTAGGAATGAAAGCTCGAGCTGTCTTCGATTTGACAAGATGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN019J22+           AGTTGGTACAAAGCACTGCCCGTGAATATCCATGGAGGGTTGCCATATCCAGCCGAAGAA
JMFF048E16+           AGTTGGTACAAAGCACTGCCCGTGAATATCCATGGAGGGTTGCCATATCCAGCCGAAGAA
JMSF003F22+                              CCGTGAATATCCATGGAGGGTTGCCATATCCAGCCGAAGAA
                      ____________________________________________________________
consensus             AGTTGGTACAAAGCACTGCCCGTGAATATCCATGGAGGGTTGCCATATCCAGCCGAAGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN019J22+           CCTGTTTGTTTAGTTCCCATGGGCTTGAGTATGGAACAGTAGTATACTAAATCCTAAACG
JMFF048E16+           CCTGTTTGTTTAGTTCCCATGGGCTTGAGTATGGAACAGTAGTATACTAAATCCTAAACG
JMSF003F22+           CCTGTTTGTTTAGTTCCCATGGGCTTGAGTATGGAACAGTAGTATACTAAATCCTAAACG
                      ____________________________________________________________
consensus             CCTGTTTGTTTAGTTCCCATGGGCTTGAGTATGGAACAGTAGTATACTAAATCCTAAACG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN019J22+           GAG                                                         
JMFF048E16+           GAGAAAGATTGAATTTTGGAGCTAAAAAGTGCAAGAATTTGGAAGAAAACCTAAGCAGAG
JMSF003F22+           GAGAAAGATTGAATTTTGGAGCTAAAAAGTGCAAGAATTTGGAAGAAAACCTAAGCAGAG
                      ____________________________________________________________
consensus             GAGAAAGATTGAATTTTGGAGCTAAAAAGTGCAAGAATTTGGAAGAAAACCTAAGCAGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF048E16+           AGCATCCTGGCTTGAGGAGAGAGGTATGTAGGAGGGGACCGACAG               
JMSF003F22+           AGCATCCTGGCTTGAGGAGAGAGGTATGTAGGAGGGGACCGACAGACATATCACCTATGG
                      ____________________________________________________________
consensus             AGCATCCTGGCTTGAGGAGAGAGGTATGTAGGAGGGGACCGACAGACATATCACCTATGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF003F22+           GCTATGGAGCTGAAGTTAATGAAAGACGTACGTTTACGTTACATCACCACCAAAATCAAA
                      ____________________________________________________________
consensus             GCTATGGAGCTGAAGTTAATGAAAGACGTACGTTTACGTTACATCACCACCAAAATCAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF003F22+           TAAGTGGATAAACTAAAACTGCTCCAACTGATCGACTTTCTCATATAATATAATACTCCT
                      ____________________________________________________________
consensus             TAAGTGGATAAACTAAAACTGCTCCAACTGATCGACTTTCTCATATAATATAATACTCCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF003F22+           CAGCTCCTTCATTAATTTATCTATCCTCTCACGGTTTTACCGGCGTACAGCAAAACCACC
                      ____________________________________________________________
consensus             CAGCTCCTTCATTAATTTATCTATCCTCTCACGGTTTTACCGGCGTACAGCAAAACCACC