Contig 009173:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006D20Sequence353009173 (2)ref|XP_009609458.1|3e-38PREDICTED: microtubule-associated protein 70-3-like [Nicotiana tomentosiformis]726005728 (4)emb|CDP16283.1|2e-88unnamed protein product [Coffea canephora]
JMSF003F01Sequence383009173 (2)ref|XP_009609458.1|5e-37PREDICTED: microtubule-associated protein 70-3-like [Nicotiana tomentosiformis]674018100ref|XP_006343175.1|4e-08PREDICTED: microtubule-associated protein 70-2-like isoform X3 [Solanum tuberos

Alignment

This contig is upended


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JMFF006D20+                                            CCTGATTTCAGCTTGAGCCTCAGACAA
JMSF003F01+                                                      GCTTGAGCCTCAGACAA
                      ____________________________________________________________
consensus                                              CCTGATTTCAGCTTGAGCCTCAGACAA
 
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JMFF006D20+           TTCCCGCTCCTTATCTCTGAGCTCATTCTCCAGCCGATTGAGCTCCACCTTCACCGGATC
JMSF003F01+           TTCCCGCTCCTTATCTCTGAGCTCATTCTCCAGCCGATTGAGCTCCACCTTCACCGGATC
                      ____________________________________________________________
consensus             TTCCCGCTCCTTATCTCTGAGCTCATTCTCCAGCCGATTGAGCTCCACCTTCACCGGATC
 
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JMFF006D20+           CGAGCCATGGAGCAGGTTTATGAACTCGTCCGCGTCCAGGCTCGGCCTCACCGACGCCCT
JMSF003F01+           CGAGCCATGGAGCAGGTTTATGAACTCGTCCGCGTCCAGGCTCGGCCTCACCGACGCCCT
                      ____________________________________________________________
consensus             CGAGCCATGGAGCAGGTTTATGAACTCGTCCGCGTCCAGGCTCGGCCTCACCGACGCCCT
 
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JMFF006D20+           CCGCCGCGACGCCTTTCCATCCTTAAACGAAGCCGACATCGTCAGC              
JMSF003F01+           CCGCCGCGACGCCTTTCCATCCTTAAACGAAGCCGACATCGTCAGCGGCGTCAGCGTCGC
                      ____________________________________________________________
consensus             CCGCCGCGACGCCTTTCCATCCTTAAACGAAGCCGACATCGTCAGCGGCGTCAGCGTCGC
 
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JMSF003F01+           CGAAGCACCAGCCTCCCACGCCGCCGGCCGCTCATTGCCGCCATTATCGCCGGAACCAAA
                      ____________________________________________________________
consensus             CGAAGCACCAGCCTCCCACGCCGCCGGCCGCTCATTGCCGCCATTATCGCCGGAACCAAA
 
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JMSF003F01+           CTCCGGCAACCCCGTCGCCACAATTTCATCCCCGGAAAACTCCGCCATCTCCGATCTATC
                      ____________________________________________________________
consensus             CTCCGGCAACCCCGTCGCCACAATTTCATCCCCGGAAAACTCCGCCATCTCCGATCTATC
 
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JMSF003F01+           CGCTTATCCCCTCTCTCACATCAAACACCTCACTCCTCCCAGTGCGATTAGATATATACC
                      ____________________________________________________________
consensus             CGCTTATCCCCTCTCTCACATCAAACACCTCACTCCTCCCAGTGCGATTAGATATATACC