Contig 009172:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF003E10Sequence417009172 (2)ref|XP_011031430.1|8e-29PREDICTED: NAC domain-containing protein 7-like isoform X1 [Populus euphratica]756020277
JMSF043G22Sequence622009172 (2)gb|KDO84442.1|5e-40hypothetical protein CISIN_1g027074mg [Citrus sinensis] gb|KDO84443.1| hypotheti787023613

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF043G22+ TGAGATTCACTTGTGGAACCTACTCC
                      ____________________________________________________________
consensus TGAGATTCACTTGTGGAACCTACTCC
 
. : . : . : . : . : . :
JMSF043G22+ TGAAGCCCGGTTAGCATTGGGAGCACTCGACAACATTTTCACCGATGGCATGTCGTTAGG
                      ____________________________________________________________
consensus TGAAGCCCGGTTAGCATTGGGAGCACTCGACAACATTTTCACCGATGGCATGTCGTTAGG
 
. : . : . : . : . : . :
JMSF043G22+ GCTCCCACCACAGCATTGGAAAACCGTGCACAATGATCTAGATTGCTTCGGGTTCTTCTC
                      ____________________________________________________________
consensus GCTCCCACCACAGCATTGGAAAACCGTGCACAATGATCTAGATTGCTTCGGGTTCTTCTC
 
. : . : . : . : . : . :
JMSF043G22+ ACTATATCCTCCCTTCTCGGTCTTGTACTCCTGCAAAACCCAGCCAGTTTTTCGTCCATT
                      ____________________________________________________________
consensus ACTATATCCTCCCTTCTCGGTCTTGTACTCCTGCAAAACCCAGCCAGTTTTTCGTCCATT
 
. : . : . : . : . : . :
JMSF043G22+ AGGGCCTTCAAAAAACTCCAGCGTAGACCTCCAACCATAAATGGAACCATTTTGATATAT
JMSF003E10+ GCCTTCAAAAAACTCCAGCGTAGACCTCCAACCATAAATGGAACCATTTTGATATAT
                      ____________________________________________________________
consensus AGGGCCTTCAAAAAACTCCAGCGTAGACCTCCAACCATAAATGGAACCATTTTGATATAT
 
. : . : . : . : . : . :
JMSF043G22+ CCGACTAGCTTCCCCTTTTGCTTTCCAGAATCCATGCTCCGACTTCTTTGACTCAGTTGG
JMSF003E10+ CCGACTAGCTTCCCCTTTTGCTTTCCAGAATCCATGCTCCGACTTCTTTGACTCAGTTGG
                      ____________________________________________________________
consensus CCGACTAGCTTCCCCTTTTGCTTTCCAGAATCCATGCTCCGACTTCTTTGACTCAGTTGG
 
. : . : . : . : . : . :
JMSF043G22+ TTGTACTAGGTACCATATTTTAGACGGCAAATTTGAAGGCAGGAAGTGGTATGTATTTAT
JMSF003E10+ TTGTACTAGGTACCATATTTTAGACGGCAAATTTGAAGGCAGGAAGTGGTATGTATTTAT
                      ____________________________________________________________
consensus TTGTACTAGGTACCATATTTTAGACGGCAAATTTGAAGGCAGGAAGTGGTATGTATTTAT
 
. : . : . : . : . : . :
JMSF043G22+ GTCTTCAGACACGTTATTTGGGAGAGCAGACCCATTTTTAACTTTTTCGAGAAGTAAAAA
JMSF003E10+ GTCTTCAGACACGTTATTTGGGAGAGCAGACCCATTTTTAACTTTTTCGAGAAGTAAAAA
                      ____________________________________________________________
consensus GTCTTCAGACACGTTATTTGGGAGAGCAGACCCATTTTTAACTTTTTCGAGAAGTAAAAA
 
. : . : . : . : . : . :
JMSF043G22+ TATCTGCTCATCAGTCCAATACAAATCAATAGCATCAGGAGGAGTAGTTGCAGGGGGGCA
JMSF003E10+ TATCTGCTCATCAGTCCAATACAAATCAATAGCATCAGGAGGAGTAGTTGCAGGGGGGCA
                      ____________________________________________________________
consensus TATCTGCTCATCAGTCCAATACAAATCAATAGCATCAGGAGGAGTAGTTGCAGGGGGGCA
 
. : . : . : . : . : . :
JMSF043G22+ CATGGCTAACAACCAGGAGAACCAAACCAAACAACGAATCACACCTCCGTCTTGATTCTC
JMSF003E10+ CATGGCTAACAACCAGGAGAACCAAACCAAACAACGAATCACACCTCCGTCTTGATTCTC
                      ____________________________________________________________
consensus CATGGCTAACAACCAGGAGAACCAAACCAAACAACGAATCACACCTCCGTCTTGATTCTC
 
. : . : . : . : . : . :
JMSF043G22+ ACTCTGCCCCTCTCTCTCTCTCTTTCTTCTCCTTCTCTCACCTCTCTTAGCCACT
JMSF003E10+ ACTCTGCCCCTCTCTCTCTCTCTTTCTTCTCCTTCTCTCAACTCTCTTAGCCACTACTCC
                      ____________________________________________________________
consensus ACTCTGCCCCTCTCTCTCTCTCTTTCTTCTCCTTCTCTCACCTCTCTTAGCCACTACTCC