Contig 009171:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF003C02Sequence384009171 (2)emb|CDP09384.1|8e-13unnamed protein product [Coffea canephora]741007017 (2)ref|XP_006349441.1|5e-88PREDICTED: putative dihydroxy-acid dehydratase, mitochondrial-like [Solanum tub
JMSF046E04Sequence778009171 (2)emb|CDP09384.1|3e-109unnamed protein product [Coffea canephora]631023633ref|XP_009596653.1|7e-108PREDICTED: L-2-hydroxyglutarate dehydrogenase, mitochondrial [Nicotiana tomento

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF046E04+ TCCATAAACCTGGAAGGCAGAGACTATGTCAAATG
                      ____________________________________________________________
consensus TCCATAAACCTGGAAGGCAGAGACTATGTCAAATG
 
. : . : . : . : . : . :
JMSF046E04+ TGTGTCCTTGAAAATGACCGGGCTTGATAGTTCCACCATAAACCATGATGCTTGGCCTGT
                      ____________________________________________________________
consensus TGTGTCCTTGAAAATGACCGGGCTTGATAGTTCCACCATAAACCATGATGCTTGGCCTGT
 
. : . : . : . : . : . :
JMSF046E04+ TCAGCCGCCCCATTGCCATAATTGTACCTGGCATATTTTTGTCACAGCCGGGGATAGATA
                      ____________________________________________________________
consensus TCAGCCGCCCCATTGCCATAATTGTACCTGGCATATTTTTGTCACAGCCGGGGATAGATA
 
. : . : . : . : . : . :
JMSF046E04+ TGTTCCCATCGTACCACTGAGCAGACATGACAGTCTCAATACTATCAGCAATCAAGTCCC
                      ____________________________________________________________
consensus TGTTCCCATCGTACCACTGAGCAGACATGACAGTCTCAATACTATCAGCAATCAAGTCCC
 
. : . : . : . : . : . :
JMSF046E04+ TTGACTGAAGGCTATAGCACATCCCTCTGGTCCCCATAGAAATGGCATCACTGACCCCAA
                      ____________________________________________________________
consensus TTGACTGAAGGCTATAGCACATCCCTCTGGTCCCCATAGAAATGGCATCACTGACCCCAA
 
. : . : . : . : . : . :
JMSF046E04+ TAGTATTGAACCTGAACCCAACCATGCCGGCCGCTCCGACGCCCTCCTTCACGGCCTCGG
                      ____________________________________________________________
consensus TAGTATTGAACCTGAACCCAACCATGCCGGCCGCTCCGACGCCCTCCTTCACGGCCTCGG
 
. : . : . : . : . : . :
JMSF046E04+ CGAGCTTGAGCAAGTGCATATTGCAGGTGTTCCCTTCGTACCAGACGGATGAAATGCCGA
                      ____________________________________________________________
consensus CGAGCTTGAGCAAGTGCATATTGCAGGTGTTCCCTTCGTACCAGACGGATGAAATGCCGA
 
. : . : . : . : . : . :
JMSF046E04+ CCTGGGGCTTGTGCATATCATCATCCGAGAGGCCCACCCCATAGAGTACGGCCTGCGAGG
JMSF003C02+ CCCCATAGAGTACGGCCTGCGAGG
                      ____________________________________________________________
consensus CCTGGGGCTTGTGCATATCATCATCCGAGAGGCCCACCCCATAGAGTACGGCCTGCGAGG
 
. : . : . : . : . : . :
JMSF046E04+ CGCCCTGGGACTTGGGCTCCGTGATGCGCGAGCTGTACTTGTTGAGCTTCTCGGCGGCAG
JMSF003C02+ CGCCCTGGGACTTGGGCTCCGTGATGCGCGAGCTGTACTTGTTGAGCTTCTCGGCGGCAG
                      ____________________________________________________________
consensus CGCCCTGGGACTTGGGCTCCGTGATGCGCGAGCTGTACTTGTTGAGCTTCTCGGCGGCAG
 
. : . : . : . : . : . :
JMSF046E04+ AAGCGGTCTGGGGCGGCGGCGGGACTTTTTCCGGCGCGGAGACGGCCTGGATGGTGAAAG
JMSF003C02+ AAGCGGTCTGGGGCGGCGGCGGGACTTTTTCCGGCGCGGAGACGGCCTGGATGGTGAAAG
                      ____________________________________________________________
consensus AAGCGGTCTGGGGCGGCGGCGGGACTTTTTCCGGCGCGGAGACGGCCTGGATGGTGAAAG
 
. : . : . : . : . : . :
JMSF046E04+ TGGGCGGCTTTCTTTGCCGGGGCCTACATGGAGAGAAACGGGTCTTAAAGATTGGTGCAG
JMSF003C02+ TGGGCGGCTTTCTTTGCCGGGGCCTACATGGAGAGAAACGGGTCTTAAAGATTGGTGCAG
                      ____________________________________________________________
consensus TGGGCGGCTTTCTTTGCCGGGGCCTACATGGAGAGAAACGGGTCTTAAAGATTGGTGCAG
 
. : . : . : . : . : . :
JMSF046E04+ AAGAGTTGTGGGTAGGCGCAGGTGTGAGGGTACCCGTGGATAGTAAGTTGGCTTGCATTG
JMSF003C02+ AAGAGTTGTGGGTAGGCGCAGGTGTGAGGGTACCCGTGGATAGTAAGTTGGCTTGCATTG
                      ____________________________________________________________
consensus AAGAGTTGTGGGTAGGCGCAGGTGTGAGGGTACCCGTGGATAGTAAGTTGGCTTGCATTG
 
. : . : . : . : . : . :
JMSF046E04+ CGGCGGCGGCGGCGGCCGGTGACGCTAAGCCCTCCGGGAAGACAGTGGGAGAGAAAGGAA
JMSF003C02+ CGGCGGCGGCGGCGGCCGGTGACGCTAAGCCCTCCGGGAAGACAGTGGGAGAGAAAGGAA
                      ____________________________________________________________
consensus CGGCGGCGGCGGCGGCCGGTGACGCTAAGCCCTCCGGGAAGACAGTGGGAGAGAAAGGAA
 
. : . : . : . : . : . :
JMSF046E04+ TGCTTCAGTAAGTGGCGTTGGC
JMSF003C02+ TGCTTCAGTAAGTGGCGTTGGCACACGACTCTTTGGGTTTACAAATTTTAAGGGTTTCCC
                      ____________________________________________________________
consensus TGCTTCAGTAAGTGGCGTTGGCACACGACTCTTTGGGTTTACAAATTTTAAGGGTTTCCC