Contig 009166:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF002K01Sequence442009166 (2)ref|XP_009794004.1|2e-27PREDICTED: protease Do-like 7 [Nicotiana sylvestris]394012768 (2)
JMSF048O02Sequence651009166 (2)emb|CAN65467.1|9e-81hypothetical protein VITISV_040526 [Vitis vinifera]764012768 (2)ref|XP_010062238.1|2e-19PREDICTED: protease Do-like 7 isoform X3 [Eucalyptus grandis]

Alignment

This contig is upended


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JMSF048O02+                    TCCAACAACCCTGATTTCCAGTCNTACACAAGCAGNTTCAGGAGCAAGAGG
                      ____________________________________________________________
consensus                      TCCAACAACCCTGATTTCCAGTCNTACACAAGCAGNTTCAGGAGCAAGAGG
 
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JMSF048O02+           AANTTNTTCATAGCTCAGAAATTTTATTGCANTAGGGTCATAGCGGAAAAACCCAAAATC
                      ____________________________________________________________
consensus             AANTTNTTCATAGCTCAGAAATTTTATTGCANTAGGGTCATAGCGGAAAAACCCAAAATC
 
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JMSF048O02+           ATGAACAGGGTCTCTGTATATTGGATAGACAGGGGTTTCTTCACGGTTCACAAACATAGC
                      ____________________________________________________________
consensus             ATGAACAGGGTCTCTGTATATTGGATAGACAGGGGTTTCTTCACGGTTCACAAACATAGC
 
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JMSF048O02+           TTCCGCCACCACAGGTCCAGGTTTAACCACGTGGCGGTTTGTGAGTATGATTCCCCGGCA
JMSF002K01+                                                     GAGTATGATTCCCNGGCA
                      ____________________________________________________________
consensus             TTCCGCCACCACAGGTCCAGGTTTAACCACGTGGCGGTTTGTGAGTATGATTCCCCGGCA
 
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JMSF048O02+           CTTATCCACAACGAAGCCGGTTGCGTAACTGGAACCGGCAGACTGAGTGTCGAAAGCTCG
JMSF002K01+           NTTATCCACAANGAAGCCGGTTGNGTAACTGGAACCGGCAGANTGAGTGTNGAAAGCTNG
                      ____________________________________________________________
consensus             CTTATCCACAACGAAGCCGGTTGCGTAACTGGAACCGGCAGACTGAGTGTCGAAAGCTCG
 
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JMSF048O02+           ACATGTGGTGATCCGGAGAACGACCACCGCGGGAACCACCTTGTTAAGCGCCCCCCGCCA
JMSF002K01+           ACATGTGGTGATCCGGAGAACGACCACCGCGGGAACCACCTTGTTAAGCGCCCCCCGCCA
                      ____________________________________________________________
consensus             ACATGTGGTGATCCGGAGAACGACCACCGCGGGAACCACCTTGTTAAGCGCCCCCCGCCA
 
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JMSF048O02+           GTCCTCGGCGTTGACGACGTTCTTGAACGGAGGATCAATCTCCATACATAGTTCCTCCTT
JMSF002K01+           GTCCTCGGCGTTGACGACGTTCTTGAACGGAGGATCAATCTCCATACATAGTTCCTCCTT
                      ____________________________________________________________
consensus             GTCCTCGGCGTTGACGACGTTCTTGAACGGAGGATCAATCTCCATACATAGTTCCTCCTT
 
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JMSF048O02+           CGTTATAGGCGATTCCGGTCCCGATGCATCCTCCAAAACCAAATTCTCCAACAAATCCTC
JMSF002K01+           CGTTATAGGCGATTCCGGTCCCGATGCATCCTCCAAAACCAAATTCTCCAACAAATCCTC
                      ____________________________________________________________
consensus             CGTTATAGGCGATTCCGGTCCCGATGCATCCTCCAAAACCAAATTCTCCAACAAATCCTC
 
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JMSF048O02+           CATCTTCCTAAAACCCTATCCCCCCTCAACCGAAATTTTGTAACACAATCTAATCAACAA
JMSF002K01+           CATCTTCCTAAAACCCTATCCCCCCTCAACCGAAATTTTGTAACACAATCTAATCAACAA
                      ____________________________________________________________
consensus             CATCTTCCTAAAACCCTATCCCCCCTCAACCGAAATTTTGTAACACAATCTAATCAACAA
 
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JMSF048O02+           TTCCTGAGTATATTTTAGAGGTACATAGAATCCAATCCGAACGAAGAGTATACTCCGGCG
JMSF002K01+           TTCCTGAGTATATTTTAGAGGTACATAGAATCCAATCCGAACGAAGAGTATACTCCGGCG
                      ____________________________________________________________
consensus             TTCCTGAGTATATTTTAGAGGTACATAGAATCCAATCCGAACGAAGAGTATACTCCGGCG
 
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JMSF048O02+           AGGATTAGATGGCTAAAGATTCACTCTACATGCAGACAGATCGGAATCAAATTTCGCCAC
JMSF002K01+           AGGATTAGATGGCTAAAGATTCACTCTACATGCAGACAGATCGGAATCAAATTTCGCCAC
                      ____________________________________________________________
consensus             AGGATTAGATGGCTAAAGATTCACTCTACATGCAGACAGATCGGAATCAAATTTCGCCAC