Contig 009164:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004P10Sequence179009164 (9)739008166 (11)ref|XP_011084738.1|1e-116PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)], partial [Sesamum indicum]
JMFF009P11Sequence588009164 (9)ref|XP_006363983.1|5e-16PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)]-like [Solanum tuberosum]747008166 (11)ref|XP_011084738.1|3e-115PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)], partial [Sesamum indicum]
JMFF012F23Sequence551009164 (9)740008166 (11)ref|XP_011084738.1|1e-116PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)], partial [Sesamum indicum]
JMFF020E22Sequence605009164 (9)ref|XP_006363983.1|9e-15PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)]-like [Solanum tuberosum]721008166 (11)ref|XP_011084738.1|7e-121PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)], partial [Sesamum indicum]
JMFF033P22Sequence102009164 (9)391008166 (11)ref|XP_011084738.1|1e-48PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)], partial [Sesamum indicum]
JMFF044E21Sequence631009164 (9)ref|XP_006363983.1|1e-83PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)]-like [Solanum tuberosum]490008166 (11)ref|XP_011084738.1|2e-56PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)], partial [Sesamum indicum]
JMFS101F09Sequence618009164 (9)ref|XP_009628662.1|3e-62PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] [Nicotiana tomentosiformis
JMSF002E17Sequence415009164 (9)gb|EYU24339.1|3e-05hypothetical protein MIMGU_mgv1a001833mg [Erythranthe guttata]716008166 (11)ref|XP_011084738.1|1e-116PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)], partial [Sesamum indicum]
JMSF023N22Sequence627009164 (9)ref|XP_009628662.1|9e-109PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] [Nicotiana tomentosiformis746008166 (11)ref|XP_009804888.1|9e-131PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] [Nicotiana sylvestris]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF023N22+                                 TGGCATACCATGAGGACATGAAAAATTGATTTCAATGG
                      ____________________________________________________________
consensus                                   TGGCATACCATGAGGACATGAAAAATTGATTTCAATGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF023N22+           CATCTATTCCAGTCTCCTCCACCCGATAAATAAGTTCCTCCCAGGCAGCTTTGTTATACT
JMFF044E21+                                                                 TATACT
                      ____________________________________________________________
consensus             CATCTATTCCAGTCTCCTCCACCCGATAAATAAGTTCCTCCCAGGCAGCTTTGTTATACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF023N22+           CTTCCATGATTGAAGCAATAAGTATCCTATCTGGATATTCTTCTTTCAATTGTTTAAACT
JMFF044E21+           CTTCCATGATGNAAGCAATAAGTATCCTATCTGGATATTCTTCTTTCAATTGTTTAAACT
                      ____________________________________________________________
consensus             CTTCCATGATTGAAGCAATAAGTATCCTATCTGGATATTCTTCTTTCAATTGTTTAAACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF023N22+           CTTTCAACATTGTTTCCAATGGTCGATCACTTATTAGTTCAATATTTTGCCAACCAATAA
JMFF044E21+           CTTTCAACATTGTTTCCAATGGTCGATCACTTATTAGTTCAATATTTTGCCAACCAATAA
JMFS101F09+                        TTCCAATGGTCGATCACTTATTAGTTCAATATTNTGCCAACCAATAA
                      ____________________________________________________________
consensus             CTTTCAACATTGTTTCCAATGGTCGATCACTTATTAGTTCAATATTTTGCCAACCAATAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF023N22+           TTTCTCCTCTTGCAGACCCATTTGATCCTGCTCGAAGTTTGGCATATCGGGGAGTGACAT
JMFF044E21+           TTTCTCCTCTTGCAGACCCATTTGATCCTGCTCGAAGTTTGGCATATCGGGGAGTGACAT
JMFS101F09+           TTTCTCCTCTTGCAGACCCATTTGATCCTGCTCGAAGTTTGGCATATCGGGGAGTGACAT
                      ____________________________________________________________
consensus             TTTCTCCTCTTGCAGACCCATTTGATCCTGCTCGAAGTTTGGCATATCGGGGAGTGACAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF023N22+           TCACAACTTTTGAAGCATCCAAGGAAACCGTTTTGGCGATCACAGCGCCCCAACCTTCAT
JMFF044E21+           TCACAACTTTTGAAGCATCCAAGGAAACCGTTTTGGCGATCACAGCGCCCCAACCTTCAT
JMFS101F09+           TCACAACTTTTGAAGCATCCAAGGAAACCGTTTTGGCGATCACAGCGCCCCAACCTTCAT
                      ____________________________________________________________
consensus             TCACAACTTTTGAAGCATCCAAGGAAACCGTTTTGGCGATCACAGCGCCCCAACCTTCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF023N22+           CGAAGGCCTTCTTCATAACGGTGTAGTTGGTGCCGGGAGGGCCCGATCCGATTACAAAGG
JMFF044E21+           CGAAGGCCTTCTTCATAACGGTGTAGTTGGTGCCGGGAGGGCCCGATCCGATTACAAAGG
JMFS101F09+           CGAAGGCCTTCTTCATAACGGTGTAGTTGGTGCCGGGAGGGCCCGATCCGATTACAAAGG
JMFF009P11+                                                        ATCCGATGACAAAGG
JMFF020E22+                                                                ACAAAGG
                      ____________________________________________________________
consensus             CGAAGGCCTTCTTCATAACGGTGTAGTTGGTGCCGGGAGGGCCCGATCCGATTACAAAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF023N22+           GGTTGGGCATTTTCAGCCCGTTTACAGTGACACTGAGATCGGGCTCTGGTGCCTGCCTTT
JMFF044E21+           GGTTGGGCATTTTCAGCCCGTTTACAGTGACACTGAGATCGGGCTCTGGTGCCTGCCTTT
JMFS101F09+           GGTTGGGCATTTTCAGCCCGTTTACAGTGACACTGAGATCGGGCTCTGGTGCCTGCCTTT
JMFF009P11+           GGTTGGGCATTTTCAGCCCGTTTACAGTGACACTGAGATCGGGCTCTGGTGCCTGGCTTT
JMFF020E22+           GGTTGGGCATTTTCAGCCCGTTTACAGTGACACTGAGATCGGGCTCTGGTGCCTGGCTTT
                      ____________________________________________________________
consensus             GGTTGGGCATTTTCAGCCCGTTTACAGTGACACTGAGATCGGGCTCTGGTGCCTGCCTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF023N22+           CCGAAGCCAACACTCTGAATCGAACACTGTTTTTGCCAAAATGGCAAACCCGTGGTTGA-
JMFF044E21+           CCGAAGCCAACACTCTGAATCGAACACTGTTTTTGCCAAAATGGCAAACCCGTGGTTGA-
JMFS101F09+           CCGAAGCCAACACTCTGAATCGAACACTGTTTTTGCCAAAATGGCAAACCCGTGGTTGA-
JMFF009P11+           CCGAAGCCAACACTCTGAATCGGACACTGTTTTTGCCAAAATGGCAAAGCCGTGGTTGAG
JMFF020E22+           CCGAAGCCAACACTCTGAATCGGACACTGTTTTTGCCAAAATGGCAAAGCCGTGGTTGAG
                      ____________________________________________________________
consensus             CCGAAGCCAACACTCTGAATCGAACACTGTTTTTGCCAAAATGGCAAACCCGTGGTTGA-
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF023N22+           --GCCTTCGTCGGAAAATCCACACTACAGTTCTTGTTGAATCGCATTTGGAATTGCTGAG
JMFF044E21+           --GCCTTCGTCGGAAAATCCACACTACAGTTCTTGTTGAATCGCATTTGGAATTGCTGAG
JMFS101F09+           --GCCTTCGTCGGAAAATCCACACTACAGTTCTTGTTGAATCGCATTTGGAATTGCTGAG
JMFF009P11+           CCGCCTTGGTCGGAAAATCCGCAGTAGAGTTCTTGTTGAATCGCATTTGGAATTGCTGAG
JMFF020E22+           CCGCCTTGGTCGGAAAATCCGCAGTAGAGTTCTTGTTGAATCGCATTTGGAATTGCTGAG
JMFF012F23+                   GTCGGAAAATCCGCAGTAGAGTTCTTGTTGAATCGCATTTGGAATTGNTGAG
                      ____________________________________________________________
consensus             --GCCTTCGTCGGAAAATCCGCAGTAGAGTTCTTGTTGAATCGCATTTGGAATTGCTGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF023N22+           TCAAACCCAAAGACACCATCTTTGCTAACTAAAATCAGTAAGTTCAAACT          
JMFF044E21+           TCAAACCCAAAGACACCATCTTTGCTAACTAAAATCAGTAAGTTCAAACT          
JMFS101F09+           TCAAACCCAAAGACACCATCTTTGCTAACTAAAATCAGTAAGTTCAAACT          
JMFF009P11+           TCAAACCCAAAGACACCATATTTGCTAACTAAAATCAGTATGTTCAAACTGGGTGAGTTG
JMFF020E22+           TCAAACCCAAAGACACCATATTTGCTAACTAAAATCAGTATGTTCAAACTGGGTGAGTTG
JMFF012F23+           TCAAACCCAAAGACACCATATTTGCTAACTAAAATCTGTATGTTCAAACTGGGTGAGTTG
                      ____________________________________________________________
consensus             TCAAACCCAAAGACACCATCTTTGCTAACTAAAATCAGTATGTTCAAACTGGGTGAGTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF009P11+           GGCGAATGGAGATAGAGATGAATATTCTGGAATCTGAGTATCACGCCCAAGGGATTTGAT
JMFF020E22+           GGCGAATGGAGATAGAGATGAATATTCTGGAATCTGAGTATCACGCCCAAGGGATTTGAT
JMFF012F23+           GGCGAATGGAGATAGAGATGAATATTCTGGAATCTGAGTATCACGCCCAAGGGATTTGAT
                      ____________________________________________________________
consensus             GGCGAATGGAGATAGAGATGAATATTCTGGAATCTGAGTATCACGCCCAAGGGATTTGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF009P11+           TATTCTTTTATGTCTTGGATTGAAGATGGAGACAAAACCGAAAGACAAGGCAGGAGGAAA
JMFF020E22+           TATTCTTTTATGTCTTGGATTGAAGATGGAGACAAAACCGAAAGACAAGGCAGGAGGAAA
JMFF012F23+           TATTCTTTTATGTCTTGGATTGAAGATGGAGACAAAACCGAAAGACAAGGCAGGAGGAAA
JMSF002E17+                TTTTATGTCTTGGATTGAAGATGGAGACAAAACCGAAAGACAAGGCAGGAGGAAA
                      ____________________________________________________________
consensus             TATTCTTTTATGTCTTGGATTGAAGATGGAGACAAAACCGAAAGACAAGGCAGGAGGAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF009P11+           CGTCTACGTTACAAATAGTTGGATGTATCGAAACGACTACGCTGTCGTCCACCGGAAACG
JMFF020E22+           CGTCTACGTTACAAATAGTTGGATGTATCGAAACGACTACGCTGTCGTCCACCGGAAACG
JMFF004P10+                   TTACAAATAGTTGGATGTATCGAAACGACTACGCTGTCGTCCACCGGAAACG
JMFF012F23+           CGTCTACGTTACAAATAGTTGGATGTATCGAAACGACTACGCTGTCGTCCACCGGAAACG
JMSF002E17+           CGTCTACGTTACAAATAGTTGGATGTATCGAAACGACTACGCTGTCGTCCACCGGAAACG
                      ____________________________________________________________
consensus             CGTCTACGTTACAAATAGTTGGATGTATCGAAACGACTACGCTGTCGTCCACCGGAAACG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF009P11+           TCCACCGGTCTTCACCGTCGTCAACACCGCAGCTGACCGGAGGGAAACGCCTACGCCGTC
JMFF020E22+           TCCACCGGTCTTCACCGTCGTCAACACCGCAGCTGACCGGAGGGAAACGCCTACGCCGTC
JMFF004P10+           TCCACCGGTCTTCACCGTCGTCAACACCGCAGCTGACCGGAGGGAAACCCCTACGCCGTC
JMFF033P22+                                            TGACCGGAGGGAAACGCNTACGCCGTC
JMFF012F23+           TCCACCGGTCTTCACCGTCGTCAACACCGCAGCTGACCGGAGGGAAACGCCTACGCCGTC
JMSF002E17+           TCCACCGGTCTTCACCGTCGTCAACACCGCAGCTGACCGGAGGGAAACGCCTACGCCGTC
                      ____________________________________________________________
consensus             TCCACCGGTCTTCACCGTCGTCAACACCGCAGCTGACCGGAGGGAAACGCCTACGCCGTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF009P11+           GGCGTTCGTGTTCGCCGGGAATGGGAAATTGGGAACGGAGAGGAGAGGATAGGATCTGTA
JMFF020E22+           GGCGTTCGTGTTCGCCGGGAATGGGAAATTGGGAACGGAGAGGAGAGGATAGGATCTGTA
JMFF004P10+           GGCGTTCGTGTTCGCCGGGAATGGGAAATTGGGAACGGAGAGGAGAGGATAGGATCTGTA
JMFF033P22+           GGCGTTCGTGTTCGCCGGGAATGGGAAATTGGGAACGGAGAGGAGAGGATAGGATCTGTA
JMFF012F23+           GGCGTTCGTGTTCGCCGGGAATGGGAAATTGGGAACGGAGAGGAGAGGATAGGATCTGTA
JMSF002E17+           GGCGTTCGTGTTCGCCGGGAATGGGAAATTGGGAACGGAGAGGAGAGGATAGGATCTGTA
                      ____________________________________________________________
consensus             GGCGTTCGTGTTCGCCGGGAATGGGAAATTGGGAACGGAGAGGAGAGGATAGGATCTGTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF009P11+           TAAGTCTAATTAATTATTTTTTAATAAATGAAT                           
JMFF020E22+           TAAGTCTAATTAATTATTTTTTAATAAATGAATATTCAATACCTTTTAAATCTCT     
JMFF004P10+           TAAGTCT                                                     
JMFF033P22+           TAAGTCTAATTAATT                                             
JMFF012F23+           TAAGTCTAATTAATTATTTTTTAATAAATGAATATTCAATACCTTTTAAATCTCTATATT
JMSF002E17+           TAAGTCTAATTAATTATTTTTTAATAAATGAATATTCAATACCTTTTAAATCTCTATATT
                      ____________________________________________________________
consensus             TAAGTCTAATTAATTATTTTTTAATAAATGAATATTCAATACCTTTTAAATCTCTATATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF012F23+           TATCAGATTATTAGCTTGGTCACTTAAGCTTTCTCAGCCAAATAAACCTCTCAGTATAAA
JMSF002E17+           TATCAGATTATTAGCTTGGTCACTTAAGCTTTCTCAGCCAAATAAACCTCTCAGTATAAA
                      ____________________________________________________________
consensus             TATCAGATTATTAGCTTGGTCACTTAAGCTTTCTCAGCCAAATAAACCTCTCAGTATAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF012F23+           GGTTTACCATAAGC                                              
JMSF002E17+           GGTTTACCATAAGCTGGAAAATTTCATATCTGAAACATGAAAGAAATGAATAATAAACCC
                      ____________________________________________________________
consensus             GGTTTACCATAAGCTGGAAAATTTCATATCTGAAACATGAAAGAAATGAATAATAAACCC