Contig 009160:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF024J24Sequence471009160 (4)781002595 (3)ref|XP_009621515.1|238PREDICTED: uncharacterized protein LOC104113120 [Nicotiana tomentosiformis]
JMFF035C24Sequence512009160 (4)776002595 (3)ref|XP_009621515.1|238PREDICTED: uncharacterized protein LOC104113120 [Nicotiana tomentosiformis]
JMFS005F11Sequence567009160 (4)
JMSF001O20Sequence204009160 (4)733002595 (3)ref|XP_006378677.1|4e-60hypothetical protein POPTR_0010s19970g [Populus trichocarpa] gb|ERP56474.1| hypo

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS005F11+ ATATCATCCTTATCAACTACAACAAGAAGGCT
                      ____________________________________________________________
consensus ATATCATCCTTATCAACTACAACAAGAAGGCT
 
. : . : . : . : . : . :
JMFS005F11+ AAAAACTAATTATGCAGATTTTGAAGAAAAAATTGATCAAACTAAGTTTTTGAAAATAAA
                      ____________________________________________________________
consensus AAAAACTAATTATGCAGATTTTGAAGAAAAAATTGATCAAACTAAGTTTTTGAAAATAAA
 
. : . : . : . : . : . :
JMFS005F11+ AGAAAAAATATACCTTTGATAGCTATGTCTTGACGAAATATTTCAAAATATTTCCCAGAT
                      ____________________________________________________________
consensus AGAAAAAATATACCTTTGATAGCTATGTCTTGACGAAATATTTCAAAATATTTCCCAGAT
 
. : . : . : . : . : . :
JMFS005F11+ TGTGTAAAATTTTTGAAACATTTATCATTATTTTTTCGAACATGTATAGATTTCGAAAAA
                      ____________________________________________________________
consensus TGTGTAAAATTTTTGAAACATTTATCATTATTTTTTCGAACATGTATAGATTTCGAAAAA
 
. : . : . : . : . : . :
JMFS005F11+ ACAAAAAAAAAACAAAAGGCGCAAAATTTCCGATCTGTTTTTCGGAAATAATACAAAACG
                      ____________________________________________________________
consensus ACAAAAAAAAAACAAAAGGCGCAAAATTTCCGATCTGTTTTTCGGAAATAATACAAAACG
 
. : . : . : . : . : . :
JMFF035C24+ AAACCTGTACGCTTTTTGCGAGCGGCGCTCCGGAAGAGCGATGGCGGCGCGTCTCGGGTG
JMFF024J24+ AAACCTGTACGCTTTTTGCGAGCGGCGCTCCGGAAGAGCGATGGCGGCGCGTCTCGGGTG
JMFS005F11+ AAACCTGTACGCTTTTTGCGAGCGGCGCTCCGGAAGAGCGATGGCGGCGCGTCTCGGGTG
                      ____________________________________________________________
consensus AAACCTGTACGCTTTTTGCGAGCGGCGCTCCGGAAGAGCGATGGCGGCGCGTCTCGGGTG
 
. : . : . : . : . : . :
JMFF035C24+ ATGCGGTGGGTTTCTTGGCTGATCGACCTCCTTTTTTTCCGATCTGCACCATCGATCGGT
JMFF024J24+ ATGCGGTGGGTTTCTTGGCTGATCGACCTCCTTTTTTTCCGATCTGCACCATCGATCGGT
JMFS005F11+ ATGCGGTGGGTTTCTTGGCTGATCGACCTCCTTTTTTTCCGATCTGCACCATCGATCGGT
JMSF001O20+ TTCCGATCTGCACCATCGATCGGT
                      ____________________________________________________________
consensus ATGCGGTGGGTTTCTTGGCTGATCGACCTCCTTTTTTTCCGATCTGCACCATCGATCGGT
 
. : . : . : . : . : . :
JMFF035C24+ GGTGCTGGGGTAACGATCGGCGGTGGTTTGATGCTTTGCGGCGATGGCGACGCAGGAGAC
JMFF024J24+ GGTGCTGGGGTAACGATCGGCGGTGGTTTGATGCTTTGCGGCGATGGCGACGCAGGAGAC
JMFS005F11+ GGTGCTGGGGTAACGATCGGCGGTGGTTTGATGCTTTGCGGCGATGGCGACGCAGGAGAC
JMSF001O20+ GGTGCTGGGGTAACGATCGGCGGTGGTTTGATGCTTTGCGGCGATGGCGACGCAGGAGAC
                      ____________________________________________________________
consensus GGTGCTGGGGTAACGATCGGCGGTGGTTTGATGCTTTGCGGCGATGGCGACGCAGGAGAC
 
. : . : . : . : . : . :
JMFF035C24+ CTCCCGTCTGGTCAGCGCCGTGATAGTGGCGAGCGATGGTGATGGCTTCGGCCGGCGACC
JMFF024J24+ CTCCCGTCTGGTCAGCGCCGTGATAGTGGCGAGCGATGGTGATGGCTTCGGCCGGCGACC
JMFS005F11+ CTCCCGTCTGGTCAGCGCCGTGATAGTGGCGAGCGATGGTGATGGCTTCGGCCGGCGACC
JMSF001O20+ CTCCCGTCTGGTCAGCGCCGTGATAGTGGCGAGCGATGGTGATGGCTTCGGCCGGCGACC
                      ____________________________________________________________
consensus CTCCCGTCTGGTCAGCGCCGTGATAGTGGCGAGCGATGGTGATGGCTTCGGCCGGCGACC
 
. : . : . : . : . : . :
JMFF035C24+ TCTCACCTCTACGCGTCTCCCTCTCTCTCTCTCTCT
JMFF024J24+ TCTCACCTCTACGCGTCTCCCTCTCTCTCTCTCTCT
JMFS005F11+ TCTCACCTCTACGCGTCTCCCTCTCTCTCTCTCTCTTGTCTGGCCGCGTGTATGC
JMSF001O20+ TCTCACCTCTACGCGTCTCCCTCTCTCTCTCTCTCTTGTCTGGCCGCGTGTATGCTGATC
                      ____________________________________________________________
consensus TCTCACCTCTACGCGTCTCCCTCTCTCTCTCTCTCTTGTCTGGCCGCGTGTATGCTGATC