Contig 009158:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF049K12+                                  CAGCATTGATTATATGACCATATCCAGAAATTTCACT
                      ____________________________________________________________
consensus                                    CAGCATTGATTATATGACCATATCCAGAAATTTCACT
 
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JMFF049K12+           AGTTATCTTCTCAATTTGTGTCTTTATATCTGTGAATTGCTTTAGCCTTTCCTCTTTCTT
JMSF004H16+              TATCTTCTCAATTTGTGTCTTAATATCTGTGAATTGCTTTAGCCTTTCCTCTTTCTT
                      ____________________________________________________________
consensus             AGTTATCTTCTCAATTTGTGTCTTTATATCTGTGAATTGCTTTAGCCTTTCCTCTTTCTT
 
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JMFF049K12+           TACTTTCAAATCTTGAACCAGTGGTGTGATTAAAGCTAGTTGCTCCTTCAATGGCATTGT
JMSF004H16+           TACTTTCAAATCTTGAACCAGTGGTGTGATTAAAGCTAGTTGCTCCTTCAATGGCATTGT
                      ____________________________________________________________
consensus             TACTTTCAAATCTTGAACCAGTGGTGTGATTAAAGCTAGTTGCTCCTTCAATGGCATTGT
 
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JMFF049K12+           CATCTTGTCTGAGTGGATCGGCGAGTTAATACTGAGTTCACCAAGAGTTGCCATTAGTGT
JMSF004H16+           CATCTTGTCTGAGTGGATCGGCGAGTTAATACTGAGTTCACCAAGAGTTGCCATTAGTGT
                      ____________________________________________________________
consensus             CATCTTGTCTGAGTGGATCGGCGAGTTAATACTGAGTTCACCAAGAGTTGCCATTAGTGT
 
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JMFF049K12+           TGCAAGCTCTGCTTCTTTTGCTGCAAGAGATTGGTGAAGGCGTGATTTGGCATTAGCAGT
JMSF004H16+           TGCAAGCTCTGCTTCTTTTGCTGCAAGAGATTGGTGAAGGCGTGATTTGGCATTAGCAGT
JMFS013E06+             CAAGCTCTGCTTCTTTTGCTGCAAGAGATTGGTGAAGGCGTGATTTGGCATTAGCAGT
                      ____________________________________________________________
consensus             TGCAAGCTCTGCTTCTTTTGCTGCAAGAGATTGGTGAAGGCGTGATTTGGCATTAGCAGT
 
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JMFF049K12+           TTCATCAACCTTTCTTCTGTAAACTTGTAAGCATTCTCTCTCCAGCTCCACCAACATTTT
JMSF004H16+           TTCATCAACCTTTCTTCTGTAAACTTGTAAGCATTCTCTCTCCAGCTCCACCAACATTTT
JMFS013E06+           TTCATCAACCTTTCTTCTGTAAACTTGTAAGCATTCTCTCTCCAGCTCCACCAACATTTT
                      ____________________________________________________________
consensus             TTCATCAACCTTTCTTCTGTAAACTTGTAAGCATTCTCTCTCCAGCTCCACCAACATTTT
 
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JMFF049K12+           GTCTTTTTCTGCCTCATTCTCACCAATGTCAGTCCATAATTGCTGGAGTTC         
JMSF004H16+           GTCTTTTTCTGCCTCATTCTCACCAATGTCAGTCCATAATTGCTGGAGTTCTCTAAGCAA
JMFS013E06+           GTCTTTTTCTGCCTCATTCTCACCAATGTCAGTCCATAATTGCTGGAGTTCTCTAAGCAA
JMFS055D09+                                                                   GCAA
JMFS130A02+                                                                   GCAA
                      ____________________________________________________________
consensus             GTCTTTTTCTGCCTCATTCTCACCAATGTCAGTCCATAATTGCTGGAGTTCTCTAAGCAA
 
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JMSF004H16+           AGTAGCGCAAGAACTGCTGGTGCCGACAC                               
JMFS013E06+           AGTAGCGCAAGAACTGCTGGTGCCGACACTGCCGCTACAAGGACTCTCAAGAGTCAACAT
JMFS055D09+           AGTAGCGCAAGAACTGCTGGTGCCGACACTGCCGCTACAAGGACTCTCAAGAGTCAACAT
JMFS130A02+           AGTAGCGCAAGAACTGCTGGTGCCGACACTGCCGCTACAAGGACTCTCAAGAGTCAACAT
                      ____________________________________________________________
consensus             AGTAGCGCAAGAACTGCTGGTGCCGACACTGCCGCTACAAGGACTCTCAAGAGTCAACAT
 
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JMFS013E06+           TTCTTCACTTCTCTCTCTTTCTCTCTCTCTCTCTCAGACACACAGCAATTATGGGCTCTT
JMFS055D09+           TTCTTCACTTCTCTCTCTTTCTCTCTCTCTCTCTCAGACACACAGCAATTATGGGCTCTT
JMFS130A02+           TTCTTCACTTCTCTCTCTTTCTCTCTCTCTCTCTCAGACACACAGCAATTATGGGCTCTT
                      ____________________________________________________________
consensus             TTCTTCACTTCTCTCTCTTTCTCTCTCTCTCTCTCAGACACACAGCAATTATGGGCTCTT
 
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JMFS013E06+           GAGAAACAGTGGAGAATTGCACAAAAGGTTCAACAAAAGCTAATTTTTCATACTCCTAAA
JMFS055D09+           GAGAAACAGTGGAGAATTGCACAAAAGGTTCAACAAAAGCTAATTTTTCATACTCCTAAA
JMFS130A02+           GAGAAACAGTGGAGAATTGCACAAAAGGTTCAACAAAAGCTAATTTTTCATACTCCTAAA
                      ____________________________________________________________
consensus             GAGAAACAGTGGAGAATTGCACAAAAGGTTCAACAAAAGCTAATTTTTCATACTCCTAAA
 
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JMFS013E06+           GGACTAACAGCACGCTAGTAGTGGATGGTGGGCTCTCTGCCTCTTTGTCTCTTTATGGAG
JMFS055D09+           GGACTAACAGCACGCTAGTAGTGGATGGTGGGCTCTCTGCCTCTTTGTCTCTTTATGGAG
JMFS130A02+           GGACTAACAGCACGCTAGTAGTGGATGGTGGGCTCTCTGCCTCTTTGTCTCTTTATGGAG
JMSF001K18+                                                                      G
                      ____________________________________________________________
consensus             GGACTAACAGCACGCTAGTAGTGGATGGTGGGCTCTCTGCCTCTTTGTCTCTTTATGGAG
 
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JMFS013E06+           TGTAAAAGGAGTTGAATTTCGAAAAAAAGAGAGTAATTATAATGAAAAAAGCTCCATCTT
JMFS055D09+           TGTAAAAGGAGTTGAATTTCGAAAAAAAGAGAGTAATTATAATGAAAAAAGCTCCATCTT
JMFS130A02+           TGTAAAAGGAGTTGAATTTCGAAAAAAAGAGAGTAATTATAATGAAAAAAGCTCCATCTT
JMSF001K18+           TGTAAANGGAGTTGAATTTCGAAAAAAAGAGAGTAATTATAATGAAAAAAGCTCCATCTT
                      ____________________________________________________________
consensus             TGTAAAAGGAGTTGAATTTCGAAAAAAAGAGAGTAATTATAATGAAAAAAGCTCCATCTT
 
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JMFS013E06+           TACTTTCCCAACTTCCAGATCTGAAACCTTCAAGAAAAAAA                   
JMFS055D09+           TACTTTCCCAACTTCCAGATCTGAAACCTTCAAGAAAAAAAACCACCACACTACAGCTTT
JMFS130A02+           TACTTTCCCAACTTCCAGATCTGAAACCTTCAAG-AAAAAAACCACCACACTACAGCTTT
JMSF001K18+           TACTTTCCCAACTTCCAGATCTGAAACCTTCAAG-AAAAAAACCACCACACTACAGCTTT
                      ____________________________________________________________
consensus             TACTTTCCCAACTTCCAGATCTGAAACCTTCAAGAAAAAAAACCACCACACTACAGCTTT
 
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JMFS055D09+           TCCACACAGCCCTCGCCACTTTTCAGGCTCCAAGTGTTGTGTTTCAGATGCAAACTGCTA
JMFS130A02+           TCCACACAGCCCTCGCCACTTTTCAGGCTCCAAGTGTTGTGTTTCAGATGCAAACTGCTA
JMSF001K18+           TCCACACAGCCCTCGCCACTTTTCAGGCTCCAAGTGTTGTGTTTCAGATGCAAACTGCTA
                      ____________________________________________________________
consensus             TCCACACAGCCCTCGCCACTTTTCAGGCTCCAAGTGTTGTGTTTCAGATGCAAACTGCTA
 
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JMFS055D09+           AATAATAAAAAGGAAATCAAAATGAAAACTTCAAAGAAAGGATTTTTACGCAGAAAAGAC
JMFS130A02+           AATAATAAAAAGGAAATCAAAATGAAAACTTCAAAGAAAGGATTTTTACGCAGAAAAGAC
JMSF001K18+           AATAATAAAAAGGAAATCAAAATGAAAACTTCAAAGAAAGGATTTTTACGCAGAAAAGAC
                      ____________________________________________________________
consensus             AATAATAAAAAGGAAATCAAAATGAAAACTTCAAAGAAAGGATTTTTACGCAGAAAAGAC
 
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JMFS055D09+           AAGCACACAAGTAGTGCAGTGGCACATAAAGAAAGTGAGAGGCTAGGGTGGTGCTAAAAT
JMFS130A02+           AAGCACACAAGTAGTGCAGTGGCACATAAAGAAAGTGAGAGGCTAGGGTGGTGCTAAAAT
JMSF001K18+           AAGCACACAAGTAGTGCAGTGGCACATAAAGAAAGTGAGAGGCTAGGGTGGTGCTAAAAT
                      ____________________________________________________________
consensus             AAGCACACAAGTAGTGCAGTGGCACATAAAGAAAGTGAGAGGCTAGGGTGGTGCTAAAAT
 
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JMFS055D09+           GCGCGAATGCAGACGGATCTGTGCACATTAGCACGAATTCCAAGGGTGGTTGGGAGGGCT
JMFS130A02+           GCGCGAATGCAGACGGATCTGTGCACATTAGCACGAATTCCAAGGGTGGTTGGGAGGGCT
JMSF001K18+           GCGCGAATGCAGACGGATCTGTGCACATTAGCACGAATTCCAAGGGTGGTTGGGAGGGCT
                      ____________________________________________________________
consensus             GCGCGAATGCAGACGGATCTGTGCACATTAGCACGAATTCCAAGGGTGGTTGGGAGGGCT
 
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JMFS055D09+           GGGGAAGAAGAA                                                
JMFS130A02+           GGGGAAGAAGAACAAACAAAGAAGTCAGTTGTGA                          
JMSF001K18+           GGGGAAGAAGAACAAACAAAGAAGTCAGTTGTGAGTGACGCTTCACCAACACCAACAAGC
                      ____________________________________________________________
consensus             GGGGAAGAAGAACAAACAAAGAAGTCAGTTGTGAGTGACGCTTCACCAACACCAACAAGC