Contig 009156:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF001H13Sequence428009156 (5)ref|XP_011101012.1|1e-09PREDICTED: protein tipD-like [Sesamum indicum]727005741 (5)ref|XP_009621460.1|230PREDICTED: uncharacterized protein LOC104113074 [Nicotiana tomentosiformis]
JMSF013E16Sequence451009156 (5)ref|XP_011101012.1|2e-10PREDICTED: protein tipD-like [Sesamum indicum]756005741 (5)ref|XP_009621460.1|248PREDICTED: uncharacterized protein LOC104113074 [Nicotiana tomentosiformis]
JMSF032P23Sequence661009156 (5)ref|XP_009770473.1|145PREDICTED: WD repeat-containing protein 44-like [Nicotiana sylvestris] ref|XP_00575005741 (5)ref|XP_009621460.1|155PREDICTED: uncharacterized protein LOC104113074 [Nicotiana tomentosiformis]
JMSF033J17Sequence617009156 (5)ref|XP_009770473.1|131PREDICTED: WD repeat-containing protein 44-like [Nicotiana sylvestris] ref|XP_00658005741 (5)ref|XP_009621460.1|167PREDICTED: uncharacterized protein LOC104113074 [Nicotiana tomentosiformis]
JMSF034D23Sequence529009156 (5)ref|XP_011101012.1|4e-16PREDICTED: protein tipD-like [Sesamum indicum]618005741 (5)ref|XP_009621460.1|168PREDICTED: uncharacterized protein LOC104113074 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF033J17+ CCCCAA
JMSF032P23+ TTCTTTCTCATGGTATCAACAATTCGAAATCCCTCTGAATCTTTCCCCAA
                      ____________________________________________________________
consensus TTCTTTCTCATGGTATCAACAATTCGAAATCCCTCTGAATCTTTCCCCAA
 
. : . : . : . : . : . :
JMSF033J17+ TAATCGCTGAACCAACGATGAAGAGCCTAACCGGCTAACTGTACCATCCTGACCCAACTC
JMSF032P23+ TAATCGCTGAACCAACGATGAAGAGCCTAACCGGCTAACTGTACCATCCTGACCCAACTC
                      ____________________________________________________________
consensus TAATCGCTGAACCAACGATGAAGAGCCTAACCGGCTAACTGTACCATCCTGACCCAACTC
 
. : . : . : . : . : . :
JMSF033J17+ ATCAACCATGAACTCTGTTCCATTGTCCAGATTCCTAATTTTCTCCTCCAGAGAATCGTT
JMSF032P23+ ATCAACCATGAACTCTGTTCCATTGTCCAGATTCCTAATTTTCTCCTCCAGAGAATCGTT
                      ____________________________________________________________
consensus ATCAACCATGAACTCTGTTCCATTGTCCAGATTCCTAATTTTCTCCTCCAGAGAATCGTT
 
. : . : . : . : . : . :
JMSF033J17+ CTCGTCTGATTGGGAAGATCGACCCGAGAAGAAATGGTCCTCGGAATCCGAGTTTGCCAG
JMSF032P23+ CTCGTCTGATTGGGAAGATCGACCCGAGAAGAAATGGTCCTCGGAATCCGAGTTTGCCAG
JMSF034D23+ GATTGGGAAGATCGACCCGAGAAGAAATGGTCCTCGGAATCCGAGTTTGCCAG
                      ____________________________________________________________
consensus CTCGTCTGATTGGGAAGATCGACCCGAGAAGAAATGGTCCTCGGAATCCGAGTTTGCCAG
 
. : . : . : . : . : . :
JMSF033J17+ CATGGCCTCACCATTGTCACTAATCCTATTATCATCCCCAGCTTTGAACTTATCACAACA
JMSF032P23+ CATGGCCTCACCATTGTCACTAATCCTATTATCATCCCCAGCTTTGAACTTATCACAACA
JMSF034D23+ CATGGCCTCACCATTGTCACTAATCCTATTATCATACCCAGCTTTGAACTTATCACAACA
JMSF013E16+ TATCATCCCCAGCTTTGAACTTATCACAACA
JMSF001H13+ TCACAACA
                      ____________________________________________________________
consensus CATGGCCTCACCATTGTCACTAATCCTATTATCATCCCCAGCTTTGAACTTATCACAACA
 
. : . : . : . : . : . :
JMSF033J17+ TTCATCATTCAATTCATCTCTATTCATTACTTCCCATTCAGGACTCAATCCCATCCATTT
JMSF032P23+ TTCATCATTCAATTCATCTCTATTCATTACTTCCCATTCAGGACTCAATCCCATCCATTT
JMSF034D23+ TTCATCATTCAATTCATCTCTATTCATTACTTCCCATTCAGGACTCAATCCCATCCATTT
JMSF013E16+ TTCATCATTCAATTCATCTCTATTCATTACTTCCCATTCAGGACTCAATCCCATCCATTT
JMSF001H13+ TTCATCATTCAATTCATCTCTATTCATTACTTCCCATTCAGGACTCAATCCCATCCATTT
                      ____________________________________________________________
consensus TTCATCATTCAATTCATCTCTATTCATTACTTCCCATTCAGGACTCAATCCCATCCATTT
 
. : . : . : . : . : . :
JMSF033J17+ CAAAAGCCTAGTTCGCCGTTCACTCACACTTTCTAAGTTCTTCGCCCAGAATTCATAACC
JMSF032P23+ CAAAAGCCTAGTTCGCCGTTCACTCACACTTTCTAAGTTCTTCGCCCAGAATTCATAACC
JMSF034D23+ CAAAAGCCTAGTTNGCCGTTCACTCACACTTTNTAAGTTNTTCGCCCAGAATTCATAACC
JMSF013E16+ CAAAAGCCTAGTTCGCCGTTCACTCACACTTTCTAAGTTCTTCGCCCAGAATTCATAACC
JMSF001H13+ CAAAAGCCTAGTTCGCCGTTCACTCACACTTTCTAAGTTCTTCGCCCAGAATTCATAACC
                      ____________________________________________________________
consensus CAAAAGCCTAGTTCGCCGTTCACTCACACTTTCTAAGTTCTTCGCCCAGAATTCATAACC
 
. : . : . : . : . : . :
JMSF033J17+ TAAAGAACCAGAACTAGTATAAAAACAATCAGACAAAGAACTTATCTCATCACCAGTGTC
JMSF032P23+ TAAAGAACCAGAACTAGTATAAAAACAATCAGACAAAGAACTTATCTCATCACCAGTGTC
JMSF034D23+ TAAAGAACCAGAACTAGTATAAAAACAATCAGACAAAGAACTTATCTCATCACCAGTGTC
JMSF013E16+ TAAAGAACCAGAACTAGTATAAAAACAATCAGACAAAGAACTTATCTCATCACCAGTGTC
JMSF001H13+ TAAAGAACCAGAACTAGTATAAAAACAATCAGACAAAGAACTTATCTCATCACCAGTGTC
                      ____________________________________________________________
consensus TAAAGAACCAGAACTAGTATAAAAACAATCAGACAAAGAACTTATCTCATCACCAGTGTC
 
. : . : . : . : . : . :
JMSF033J17+ AAAGAACTGATCCTCGTTTCTTTCGCCACAACTTCCCATCATTCCTTAAACCTTAAAATC
JMSF032P23+ AAAGAACTGATCCTCGTTTCTTTCGCCACAACTTCCCATCATTCCTTAAACCTTAAAATC
JMSF034D23+ AAAGAACTGATCCTCGTTTCTTTCGCCACAACTTCCCATCATTCCTTAAACCTTAAAATC
JMSF013E16+ AAAGAACTGATCCTCGTTTCTTTCGCCACAACTTCCCATCATTCCTTAAACCTTAAAATC
JMSF001H13+ AAAGAACTGATCCTCGTTTCTTTCGCCACAACTTCCCATCATTCCTTAAACCTTAAAATC
                      ____________________________________________________________
consensus AAAGAACTGATCCTCGTTTCTTTCGCCACAACTTCCCATCATTCCTTAAACCTTAAAATC
 
. : . : . : . : . : . :
JMSF033J17+ CTCAATTTTCCATAAATTACGAGAACTAGAAACACAGTTCGCCTTNTTAGTCCTCGAATA
JMSF032P23+ CTCAATTTTCCATAAATTACGAGAACTAGAAACACAGTTCGCCTTCTTAGTCCTCGAATA
JMSF034D23+ CTCAATTTTCCATAAATTACGAGAACTNGAAACACAGTTCGCCTTNTTAGTCCTCGAATA
JMSF013E16+ CTCAATTTTCCATAAATTACGAGAACTAGAAACACAGTTCGCCTTNTTAGTCCTCGAATA
JMSF001H13+ CTCAATTTTCCATAAATTACGAGAACTAGAAACACAGTTCGCCTTCTTAGTCCTCGAATA
                      ____________________________________________________________
consensus CTCAATTTTCCATAAATTACGAGAACTAGAAACACAGTTCGCCTTCTTAGTCCTCGAATA
 
. : . : . : . : . : . :
JMSF033J17+ CCACGAAAAAGGGAACATGCAGAAAGAAAAAAAAACACGAAATTTGGGAGTAGAACAAAC
JMSF032P23+ CCACGAAAAAGGGAACATGCAGAAAGAAAAAAAAACACGAAATTTGGGAGTAGAACAAAC
JMSF034D23+ CCACGAAAAAGGGAACATGCAGAAAGAAAAAAAAACACGAAATTTGGGAGTAGAACAAAC
JMSF013E16+ CCACGAAAAAGGGAACATGCAGAAAGAAAAAAAAACACGAAATTTGGGAGTAGAACAAAC
JMSF001H13+ CCACGAAAAAGGGAACATGCAGAAAGAAAAAAAAACACGAAATTTGGGAGTAGAACAAAC
                      ____________________________________________________________
consensus CCACGAAAAAGGGAACATGCAGAAAGAAAAAAAAACACGAAATTTGGGAGTAGAACAAAC
 
. : . : . : . : . : . :
JMSF033J17+ GAGTCAAAC
JMSF032P23+ GAGTCAAAC
JMSF034D23+ GAGTCAAACTGGAATTTATAACAAAAATGGCGAAAGGATCAACGGGTGTGTC
JMSF013E16+ GAGTCAAACTGGAATTTATAACAAAAATGGCGAAAGGATCAACGGGTGTGTC
JMSF001H13+ GAGTCAAACTGGAATTTATAACAAAAATGGCGAAAGGATCAACGGGTGTGTCTCCGACCC
                      ____________________________________________________________
consensus GAGTCAAACTGGAATTTATAACAAAAATGGCGAAAGGATCAACGGGTGTGTCTCCGACCC