Contig 009156:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF001H13Sequence428009156 (5)ref|XP_011101012.1|1e-09PREDICTED: protein tipD-like [Sesamum indicum]727005741 (5)ref|XP_009621460.1|230PREDICTED: uncharacterized protein LOC104113074 [Nicotiana tomentosiformis]
JMSF013E16Sequence451009156 (5)ref|XP_011101012.1|2e-10PREDICTED: protein tipD-like [Sesamum indicum]756005741 (5)ref|XP_009621460.1|248PREDICTED: uncharacterized protein LOC104113074 [Nicotiana tomentosiformis]
JMSF032P23Sequence661009156 (5)ref|XP_009770473.1|145PREDICTED: WD repeat-containing protein 44-like [Nicotiana sylvestris] ref|XP_00575005741 (5)ref|XP_009621460.1|155PREDICTED: uncharacterized protein LOC104113074 [Nicotiana tomentosiformis]
JMSF033J17Sequence617009156 (5)ref|XP_009770473.1|131PREDICTED: WD repeat-containing protein 44-like [Nicotiana sylvestris] ref|XP_00658005741 (5)ref|XP_009621460.1|167PREDICTED: uncharacterized protein LOC104113074 [Nicotiana tomentosiformis]
JMSF034D23Sequence529009156 (5)ref|XP_011101012.1|4e-16PREDICTED: protein tipD-like [Sesamum indicum]618005741 (5)ref|XP_009621460.1|168PREDICTED: uncharacterized protein LOC104113074 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF033J17+                                                                 CCCCAA
JMSF032P23+                     TTCTTTCTCATGGTATCAACAATTCGAAATCCCTCTGAATCTTTCCCCAA
                      ____________________________________________________________
consensus                       TTCTTTCTCATGGTATCAACAATTCGAAATCCCTCTGAATCTTTCCCCAA
 
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JMSF033J17+           TAATCGCTGAACCAACGATGAAGAGCCTAACCGGCTAACTGTACCATCCTGACCCAACTC
JMSF032P23+           TAATCGCTGAACCAACGATGAAGAGCCTAACCGGCTAACTGTACCATCCTGACCCAACTC
                      ____________________________________________________________
consensus             TAATCGCTGAACCAACGATGAAGAGCCTAACCGGCTAACTGTACCATCCTGACCCAACTC
 
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JMSF033J17+           ATCAACCATGAACTCTGTTCCATTGTCCAGATTCCTAATTTTCTCCTCCAGAGAATCGTT
JMSF032P23+           ATCAACCATGAACTCTGTTCCATTGTCCAGATTCCTAATTTTCTCCTCCAGAGAATCGTT
                      ____________________________________________________________
consensus             ATCAACCATGAACTCTGTTCCATTGTCCAGATTCCTAATTTTCTCCTCCAGAGAATCGTT
 
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JMSF033J17+           CTCGTCTGATTGGGAAGATCGACCCGAGAAGAAATGGTCCTCGGAATCCGAGTTTGCCAG
JMSF032P23+           CTCGTCTGATTGGGAAGATCGACCCGAGAAGAAATGGTCCTCGGAATCCGAGTTTGCCAG
JMSF034D23+                  GATTGGGAAGATCGACCCGAGAAGAAATGGTCCTCGGAATCCGAGTTTGCCAG
                      ____________________________________________________________
consensus             CTCGTCTGATTGGGAAGATCGACCCGAGAAGAAATGGTCCTCGGAATCCGAGTTTGCCAG
 
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JMSF033J17+           CATGGCCTCACCATTGTCACTAATCCTATTATCATCCCCAGCTTTGAACTTATCACAACA
JMSF032P23+           CATGGCCTCACCATTGTCACTAATCCTATTATCATCCCCAGCTTTGAACTTATCACAACA
JMSF034D23+           CATGGCCTCACCATTGTCACTAATCCTATTATCATACCCAGCTTTGAACTTATCACAACA
JMSF013E16+                                        TATCATCCCCAGCTTTGAACTTATCACAACA
JMSF001H13+                                                               TCACAACA
                      ____________________________________________________________
consensus             CATGGCCTCACCATTGTCACTAATCCTATTATCATCCCCAGCTTTGAACTTATCACAACA
 
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JMSF033J17+           TTCATCATTCAATTCATCTCTATTCATTACTTCCCATTCAGGACTCAATCCCATCCATTT
JMSF032P23+           TTCATCATTCAATTCATCTCTATTCATTACTTCCCATTCAGGACTCAATCCCATCCATTT
JMSF034D23+           TTCATCATTCAATTCATCTCTATTCATTACTTCCCATTCAGGACTCAATCCCATCCATTT
JMSF013E16+           TTCATCATTCAATTCATCTCTATTCATTACTTCCCATTCAGGACTCAATCCCATCCATTT
JMSF001H13+           TTCATCATTCAATTCATCTCTATTCATTACTTCCCATTCAGGACTCAATCCCATCCATTT
                      ____________________________________________________________
consensus             TTCATCATTCAATTCATCTCTATTCATTACTTCCCATTCAGGACTCAATCCCATCCATTT
 
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JMSF033J17+           CAAAAGCCTAGTTCGCCGTTCACTCACACTTTCTAAGTTCTTCGCCCAGAATTCATAACC
JMSF032P23+           CAAAAGCCTAGTTCGCCGTTCACTCACACTTTCTAAGTTCTTCGCCCAGAATTCATAACC
JMSF034D23+           CAAAAGCCTAGTTNGCCGTTCACTCACACTTTNTAAGTTNTTCGCCCAGAATTCATAACC
JMSF013E16+           CAAAAGCCTAGTTCGCCGTTCACTCACACTTTCTAAGTTCTTCGCCCAGAATTCATAACC
JMSF001H13+           CAAAAGCCTAGTTCGCCGTTCACTCACACTTTCTAAGTTCTTCGCCCAGAATTCATAACC
                      ____________________________________________________________
consensus             CAAAAGCCTAGTTCGCCGTTCACTCACACTTTCTAAGTTCTTCGCCCAGAATTCATAACC
 
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JMSF033J17+           TAAAGAACCAGAACTAGTATAAAAACAATCAGACAAAGAACTTATCTCATCACCAGTGTC
JMSF032P23+           TAAAGAACCAGAACTAGTATAAAAACAATCAGACAAAGAACTTATCTCATCACCAGTGTC
JMSF034D23+           TAAAGAACCAGAACTAGTATAAAAACAATCAGACAAAGAACTTATCTCATCACCAGTGTC
JMSF013E16+           TAAAGAACCAGAACTAGTATAAAAACAATCAGACAAAGAACTTATCTCATCACCAGTGTC
JMSF001H13+           TAAAGAACCAGAACTAGTATAAAAACAATCAGACAAAGAACTTATCTCATCACCAGTGTC
                      ____________________________________________________________
consensus             TAAAGAACCAGAACTAGTATAAAAACAATCAGACAAAGAACTTATCTCATCACCAGTGTC
 
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JMSF033J17+           AAAGAACTGATCCTCGTTTCTTTCGCCACAACTTCCCATCATTCCTTAAACCTTAAAATC
JMSF032P23+           AAAGAACTGATCCTCGTTTCTTTCGCCACAACTTCCCATCATTCCTTAAACCTTAAAATC
JMSF034D23+           AAAGAACTGATCCTCGTTTCTTTCGCCACAACTTCCCATCATTCCTTAAACCTTAAAATC
JMSF013E16+           AAAGAACTGATCCTCGTTTCTTTCGCCACAACTTCCCATCATTCCTTAAACCTTAAAATC
JMSF001H13+           AAAGAACTGATCCTCGTTTCTTTCGCCACAACTTCCCATCATTCCTTAAACCTTAAAATC
                      ____________________________________________________________
consensus             AAAGAACTGATCCTCGTTTCTTTCGCCACAACTTCCCATCATTCCTTAAACCTTAAAATC
 
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JMSF033J17+           CTCAATTTTCCATAAATTACGAGAACTAGAAACACAGTTCGCCTTNTTAGTCCTCGAATA
JMSF032P23+           CTCAATTTTCCATAAATTACGAGAACTAGAAACACAGTTCGCCTTCTTAGTCCTCGAATA
JMSF034D23+           CTCAATTTTCCATAAATTACGAGAACTNGAAACACAGTTCGCCTTNTTAGTCCTCGAATA
JMSF013E16+           CTCAATTTTCCATAAATTACGAGAACTAGAAACACAGTTCGCCTTNTTAGTCCTCGAATA
JMSF001H13+           CTCAATTTTCCATAAATTACGAGAACTAGAAACACAGTTCGCCTTCTTAGTCCTCGAATA
                      ____________________________________________________________
consensus             CTCAATTTTCCATAAATTACGAGAACTAGAAACACAGTTCGCCTTCTTAGTCCTCGAATA
 
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JMSF033J17+           CCACGAAAAAGGGAACATGCAGAAAGAAAAAAAAACACGAAATTTGGGAGTAGAACAAAC
JMSF032P23+           CCACGAAAAAGGGAACATGCAGAAAGAAAAAAAAACACGAAATTTGGGAGTAGAACAAAC
JMSF034D23+           CCACGAAAAAGGGAACATGCAGAAAGAAAAAAAAACACGAAATTTGGGAGTAGAACAAAC
JMSF013E16+           CCACGAAAAAGGGAACATGCAGAAAGAAAAAAAAACACGAAATTTGGGAGTAGAACAAAC
JMSF001H13+           CCACGAAAAAGGGAACATGCAGAAAGAAAAAAAAACACGAAATTTGGGAGTAGAACAAAC
                      ____________________________________________________________
consensus             CCACGAAAAAGGGAACATGCAGAAAGAAAAAAAAACACGAAATTTGGGAGTAGAACAAAC
 
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JMSF033J17+           GAGTCAAAC                                                   
JMSF032P23+           GAGTCAAAC                                                   
JMSF034D23+           GAGTCAAACTGGAATTTATAACAAAAATGGCGAAAGGATCAACGGGTGTGTC        
JMSF013E16+           GAGTCAAACTGGAATTTATAACAAAAATGGCGAAAGGATCAACGGGTGTGTC        
JMSF001H13+           GAGTCAAACTGGAATTTATAACAAAAATGGCGAAAGGATCAACGGGTGTGTCTCCGACCC
                      ____________________________________________________________
consensus             GAGTCAAACTGGAATTTATAACAAAAATGGCGAAAGGATCAACGGGTGTGTCTCCGACCC