Contig 009149:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS169F11+                                         AATAACATTCGATTACATGCACCTTGTACA
                      ____________________________________________________________
consensus                                           AATAACATTCGATTACATGCACCTTGTACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN004D14+                                          TTAAAAAAATAAAAATAAAAAGAATTTAT
JMFS169F11+           ATCAGTACAATATATATAGGTAATTCATAATTTAAAAAAATAAGAATAAAAAGAATTTAT
                      ____________________________________________________________
consensus             ATCAGTACAATATATATAGGTAATTCATAATTTAAAAAAATAAGAATAAAAAGAATTTAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN004D14+           TCGCCTAAATAACTACATTATTATTCAATTCACCTCAGACCGGATGCCTATCATCATCAT
JMFS169F11+           TCGACTAAATAACTACATTATTATTGAATTCACCTCAGACCAGATGCC---AATCATCAT
                      ____________________________________________________________
consensus             TCGCCTAAATAACTACATTATTATTGAATTCACCTCAGACCGGATGCCTATCATCATCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN004D14+           CATCATCATCTATCTTCTTCCCTTATAAGTCAAATCATCAGCTAAACCTGGAATGTCTTT
JMFS169F11+           CATCATCATCTATCTTCTTCCCTTATAAGTCAAATCATCAGCTAAACCTGGAATGTCTTT
                      ____________________________________________________________
consensus             CATCATCATCTATCTTCTTCCCTTATAAGTCAAATCATCAGCTAAACCTGGAATGTCTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN004D14+           CAATTTATCCTCCGTATCCTTGCGAACGCACTCAGTGTCGCACTGCATCTCGCAGTCGGT
JMFS169F11+           CAATTTATCCTCCGTATCCTTGCGAACGCACTCAGTGTCGCACTGCATCTCGCAGTCGGT
                      ____________________________________________________________
consensus             CAATTTATCCTCCGTATCCTTGCGAACGCACTCAGTGTCGCACTGCATCTCGCAGTCGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN004D14+           GTATTTCCTGCCTCCCGCTTTCATGTCTATGCCTTCTTTCGTGCCTTTTTCCGTGCAGCT
JMFS169F11+           GTATTTCCTGCCTCCCGCTTTCATGTCTATGCCTTCTTTCGTGCCTTTTTCCGTGCAGCT
                      ____________________________________________________________
consensus             GTATTTCCTGCCTCCCGCTTTCATGTCTATGCCTTCTTTCGTGCCTTTTTCCGTGCAGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN004D14+           CTCCTTCTTCGTGCACGCCGCGAAACAATCCTTGTACAGCTGGGTTTCTTCGCCGGCTTC
JMFS169F11+           CTCCTTCTTCGTGCACGCCGCGAAACAATCCTTGTACAGCTGGGTTTCTTCGCCGGCTTC
                      ____________________________________________________________
consensus             CTCCTTCTTCGTGCACGCCGCGAAACAATCCTTGTACAGCTGGGTTTCTTCGCCGGCTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN004D14+           CGCCGGACTGCCAGCTTCCGCCTCGCTGCCGGCTTCCGCCGGGCTGCCGGCTTCCGCCGG
JMFS169F11+           CGCCGGACTGCCAGCTTCCGCCTCGCTGCCGGCTTCCGCCGGGCTGCCGGCTTCCGCCGG
                      ____________________________________________________________
consensus             CGCCGGACTGCCAGCTTCCGCCTCGCTGCCGGCTTCCGCCGGGCTGCCGGCTTCCGCCGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN004D14+           GCTGCCAGCTTCCGCCGGGCTGCCAGCTGGCGCCTCGCTGCCGGCTTCCGCCTTGGGAAC
JMFS169F11+           GCTGCCAGCTTCCGCCGGGCTGCCAGCTGGCGCCTCGCTGCCGGCTTCCGCCTTGGGAAC
                      ____________________________________________________________
consensus             GCTGCCAGCTTCCGCCGGGCTGCCAGCTGGCGCCTCGCTGCCGGCTTCCGCCTTGGGAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN004D14+           GCCGTCGTTCACGACGGACAGGACCACCATGCATACCACAAACACTGCAACCAATTTTGT
JMFS169F11+           GCCGTCGTTCACGACGGACAGGACCACCATGCATACCACAAACACTGCAACCAATTTTGT
                      ____________________________________________________________
consensus             GCCGTCGTTCACGACGGACAGGACCACCATGCATACCACAAACACTGCAACCAATTTTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN004D14+           CATTTTTTCGATCTGATCTGATCTGTGCT                               
JMFS169F11+           CATTTTTTCGATCTGATCTGATCTGTGCTTTAATTAATATGATCGATTTATTTATTTCTT
                      ____________________________________________________________
consensus             CATTTTTTCGATCTGATCTGATCTGTGCTTTAATTAATATGATCGATTTATTTATTTCTT