Contig 009148:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS095E02+                 CAGCTGTCTGATAATTACCGGGATTGTAGTAAGTGCTTGAATAACTTGCAGTCC
                      ____________________________________________________________
consensus                   CAGCTGTCTGATAATTACCGGGATTGTAGTAAGTGCTTGAATAACTTGCAGTCC
 
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JMFS095E02+           CAGCATAAGATCCAGTATTCTGAAATGAGGAAAGAGGCTGATAAGGAGCACCTGTATTTT
                      ____________________________________________________________
consensus             CAGCATAAGATCCAGTATTCTGAAATGAGGAAAGAGGCTGATAAGGAGCACCTGTATTTT
 
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JMFS095E02+           GATATGCTCCTACGGGTTGAGCATATGATTGATTAGACTGCTGATGATAGCCATTGTAGT
JMFS117D11+             TATGCTCCTACGGGTTGAGCATATGATTGATTAGACTGCTGATGATAGCCATTGTAGT
JMFS169A03+                                                                   TAGT
                      ____________________________________________________________
consensus             GATATGCTCCTACGGGTTGAGCATATGATTGATTAGACTGCTGATGATAGCCATTGTAGT
 
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JMFS095E02+           AAGCTGCATAACCCGCATTGTTGTAGCCATATGGATTGGTGCTTGGATAAGTGGAATAAT
JMFS117D11+           AAGCTGCATAACCCGCATTGTTGTAGCCATATGGATTGGTGCTTGGATAAGTGGAATAAT
JMFS169A03+           AAGCTGCATAACCNGCATTGTGNTAGCCATATGGATTGGTGCTTGGATAAGTGGAATAAT
                      ____________________________________________________________
consensus             AAGCTGCATAACCCGCATTGTTGTAGCCATATGGATTGGTGCTTGGATAAGTGGAATAAT
 
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JMFS095E02+           TACTGTAATCTTGAGGAACACCTGCTGCTACTGAACTCGAGGCCGCACTAGTAGATGCCA
JMFS117D11+           TACTGTAATCTTGAGGAACACCTGCTGCTACTGAACTCGAGGCCGCACTAGTAGATGCCA
JMFS169A03+           TACTGTAATCTTGAGGAACACCTGCTGCTACTGAACTCGAGGCCGCACTAGTAGATGCCA
                      ____________________________________________________________
consensus             TACTGTAATCTTGAGGAACACCTGCTGCTACTGAACTCGAGGCCGCACTAGTAGATGCCA
 
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JMFS095E02+           CACTTGATCCATCTTGGATGTTTGTAGAAGTAGTATTTGCTTGTTGATCATGGTGATAAC
JMFS117D11+           CACTTGATCCATCTTGGATGTTTGTAGAAGTAGTATTTGCTTGTTGATCATGGTGATAAC
JMFS169A03+           CACTTGATCCATCTTGGATGTTTGTAGAAGTAGTATTTGCTTGTTGATCATGGTGATAAC
                      ____________________________________________________________
consensus             CACTTGATCCATCTTGGATGTTTGTAGAAGTAGTATTTGCTTGTTGATCATGGTGATAAC
 
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JMFS095E02+           CGGGATTGGAAATAACACCATTCTCCCTGGCATAGTTATCAACTCCATGAGCAGTCCATG
JMFS117D11+           CGGGATTGGAAATAACACCATTCTCCCTGGCATAGTTATCAACTCCATGAGCAGTCCATG
JMFS169A03+           CGGGATTGGAAATAACACCATTCTCCCTGGCATAGTTATCAACTCCATGAGCAGTCCATG
                      ____________________________________________________________
consensus             CGGGATTGGAAATAACACCATTCTCCCTGGCATAGTTATCAACTCCATGAGCAGTCCATG
 
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JMFS095E02+           ATGCCGCTACAGAGGTAGGAGGGGCATAATACGACGATGCATAATGTTGGCTTGCATCAA
JMFS117D11+           ATGCCGCTACAGAGGTAGGAGGGGCATAATACGACGATGCATAATGTTGGCTTGCATCAA
JMFS169A03+           ATGCCGCTACAGAGGTAGGAGGGGCATAATACGACGATGCATAATGTTGGCTTGCATCAA
                      ____________________________________________________________
consensus             ATGCCGCTACAGAGGTAGGAGGGGCATAATACGACGATGCATAATGTTGGCTTGCATCAA
 
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JMFS095E02+           CAATCTGATGATTCTCCTGCAAATTGGGCATGAAGGTAGGTGCGGCGTCGGCAGCTTTGG
JMFS117D11+           CAATCTGATGATTCTCCTGCAAATTGGGCATGAAGGTAGGTGCGGCGTCGGCAGCTTTGG
JMFS169A03+           CAATCTGATGATTCTCCTGCAAATTGGGCATGAAGGTAGGTGCGGCGTCGGCAGCTTTGG
                      ____________________________________________________________
consensus             CAATCTGATGATTCTCCTGCAAATTGGGCATGAAGGTAGGTGCGGCGTCGGCAGCTTTGG
 
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JMFS095E02+           GTCCTTGATTCATCATCTCCTCGTTACATCCCCTGCAGAAAACTGTAAAAGAGAACAGTA
JMFS117D11+           GTCCTTGATTCATCATCTCCTCGTTACATCCCCTGCAGAAAACTGTAAAAGAGAACAGTA
JMFS169A03+           GTCCTTGATTCATCATCTCCTCGTTACATCCCCTGCAGAAAACTGTAAAAGAGAACAGTA
                      ____________________________________________________________
consensus             GTCCTTGATTCATCATCTCCTCGTTACATCCCCTGCAGAAAACTGTAAAAGAGAACAGTA
 
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JMFS095E02+           ACAAATCAGCTCGAACAAGTAA                                      
JMFS117D11+           ACAAATCAGCTCGAACAAGTAACTCCTCTTCCTTGCGTATTAACAACAGCAGATTGAGAC
JMFS169A03+           ACAAATCAGCTCGAACAAGTAACTCCTCTTCCTTGCGTATTAACAACAGCAGATTGAGAC
                      ____________________________________________________________
consensus             ACAAATCAGCTCGAACAAGTAACTCCTCTTCCTTGCGTATTAACAACAGCAGATTGAGAC
 
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JMFS117D11+           GAAAAAGGTATCAAAAAGATATGACACAGCAACAGGAAAAAATAAAATACAAATAAAGAA
JMFS169A03+           GAAAAAGGTATCAAAAAGATATGACACAGCAACAGGAAAAAATAAAATACAAATAAAGAA
                      ____________________________________________________________
consensus             GAAAAAGGTATCAAAAAGATATGACACAGCAACAGGAAAAAATAAAATACAAATAAAGAA
 
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JMFS117D11+           ACAACAAAAAGAAAACTGTCTGTATGC                                 
JMFS169A03+           ACAACAAAAAGAAAACTGTCTGTATGCGAATATGAATATCGGAGAATTTGCAAAACGGAA
                      ____________________________________________________________
consensus             ACAACAAAAAGAAAACTGTCTGTATGCGAATATGAATATCGGAGAATTTGCAAAACGGAA