Contig 009140:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS105F02+                                            CAATATCCTGATGAGGTTTAGGTGTGG
JMFS150F11+                                                               AGGTGTGG
                      ____________________________________________________________
consensus                                              CAATATCCTGATGAGGTTTAGGTGTGG
 
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JMFS105F02+           GAGTGGGATTGGACTTTACCGTGGGAGGCTGAGGAGGAAGGCTTGAAGTAGTTCGTAAGC
JMFS150F11+           GAGTGGGATTGGACTTTACCGTGGGAGGCTGAGGAGGAAGGCTTGAAGTAGTTCGTAAGC
                      ____________________________________________________________
consensus             GAGTGGGATTGGACTTTACCGTGGGAGGCTGAGGAGGAAGGCTTGAAGTAGTTCGTAAGC
 
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JMFS105F02+           TAACTGTCTTCACTGTTCTACTCACTTCCTTATCATCTCTATCCCAAATGATAGGAGAGA
JMFS150F11+           TAACTGTCTTCACTGTTCTACTCACTTCCTTATCATCTCTATCCCAAATGATAGGAGAGA
                      ____________________________________________________________
consensus             TAACTGTCTTCACTGTTCTACTCACTTCCTTATCATCTCTATCCCAAATGATAGGAGAGA
 
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JMFS105F02+           ATTTCCTCTTCTTACTCTGGACAGGTGACTGATTTCCATTAACCAACTTCTTTGCCACAA
JMFS015D02+                                                                    CAA
JMFS150F11+           ATTTCCTCTTCTTACTCTGGACAGGTGACTGATTTCCATTAACCAACTTCTTTGCCACAA
                      ____________________________________________________________
consensus             ATTTCCTCTTCTTACTCTGGACAGGTGACTGATTTCCATTAACCAACTTCTTTGCCACAA
 
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JMFS105F02+           CATCTTTCAACTCTGAATCTGTATCCACAGCACCATCAGAACCACTATCGCTAGACAGCT
JMFS015D02+           CATCTTTCAACTCTGAATCTGTATCCACAGCACCATCAGAACCACTATCGCTAGACAGCT
JMFS150F11+           CATCTTTCAACTCTGAATCTGTATCCACAGCACCATCAGAACCACTATCGCTAGACAGCT
                      ____________________________________________________________
consensus             CATCTTTCAACTCTGAATCTGTATCCACAGCACCATCAGAACCACTATCGCTAGACAGCT
 
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JMFS105F02+           CCCCTGGCTCCCGGTCAACATCCCTGACTACAAACCCAGATCTCTCAGCTTCACCAGCAC
JMFS015D02+           CCCCTGGCTCCCGGTCAACATCCCTGACTACAAACCCAGATCTCTCAGCTTCACCAGCAC
JMFS150F11+           CCCCTGGCTCCCGGTCAACATCCCTGACTACAAACCCAGATCTCTCAGCTTCACCAGCAC
                      ____________________________________________________________
consensus             CCCCTGGCTCCCGGTCAACATCCCTGACTACAAACCCAGATCTCTCAGCTTCACCAGCAC
 
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JMFS105F02+           TCCCACCGCTTCCACCTTCGCTACTGCCAGAGTCACTCCTACTAGACACAGAACGACGCT
JMFS015D02+           TCCCACCGCTTCCACCTTCGCTACTGCCAGAGTCACTCCTACTAGACACAGAACGACGCT
JMFS150F11+           TCCCACCGCTTCCACCTTCGCTACTGCCAGAGTCACTCCTACTAGACACAGAACGACGCT
                      ____________________________________________________________
consensus             TCCCACCGCTTCCACCTTCGCTACTGCCAGAGTCACTCCTACTAGACACAGAACGACGCT
 
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JMFS105F02+           CTCCATTCATCACTTCCCTTTCTTTTACCTCCTTCTGTCTGACCCTACCCCTATCACGGC
JMFS015D02+           CTCCATTCATCACTTCCCTTTCTTTTACCTCCTTCTGTCTGACCCTACCCCTATCACGGC
JMFS150F11+           CTCCATTCATCACTTCCCTTTCTTTTACCTCCTTCTGTCTGACCCTACCCCTATCACGGC
                      ____________________________________________________________
consensus             CTCCATTCATCACTTCCCTTTCTTTTACCTCCTTCTGTCTGACCCTACCCCTATCACGGC
 
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JMFS105F02+           TATTCCTGTCACGAACTCGAACCCTCTCATAATCCTGATTCCCATCCCTGATTCGATCAT
JMFS015D02+           TATTCCTGTCACGAACTCGAACCCTCTCATAATCCTGATTCCCATCCCTGATTCGATCAT
JMFS150F11+           TATTCCTGTCACGAACTCGAACCCTCTCATAATCCTGATTCCCATCCCTGATTCGATCAT
JMFS161C03+                                           TCCTGATTCCCATCCCTGATTCGATCAT
                      ____________________________________________________________
consensus             TATTCCTGTCACGAACTCGAACCCTCTCATAATCCTGATTCCCATCCCTGATTCGATCAT
 
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JMFS105F02+           AATCCCTCTTGGAATACCCAAATTCCCTCCTGGGCACATCCAAATCTGACTCCCGGCTCC
JMFS015D02+           AATCCCTCTTGGAATACCCAAATTCCCTCCTGGGCACATCCAAATCTGACTCCCGGCTCC
JMFS150F11+           AATCCCTCTTGGAATACCCAAATTCCCTCCTGGGCACATCCAAATCTGACTCCCGGCTCC
JMFS161C03+           AATCCCTCTTGGAATACCCAAATTCCCTCCTGGGCACATCCAAATCTGACTCCCGGCTCC
                      ____________________________________________________________
consensus             AATCCCTCTTGGAATACCCAAATTCCCTCCTGGGCACATCCAAATCTGACTCCCGGCTCC
 
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JMFS105F02+           TGAACTCATTATCTCTGTAACCTCCGTGCCTTCCAGCAGCCATACGGAAGTTAACGCAAA
JMFS015D02+           TGAACTCATTATCTCTGTAACCTCCGTGCCTTCCAGCAGCCATACGGAAGTTAACGCAAA
JMFS150F11+           TGAACTCATTATCTCTGTAACCTCCGTGCCTTCCAGCAGCCATACGGAAGTTAACGCAAA
JMFS161C03+           TGAACTCATTATCTCTGTAACCTCCGTGCCTTCCAGCAGCCATACGGAAGTTAACGCAAA
                      ____________________________________________________________
consensus             TGAACTCATTATCTCTGTAACCTCCGTGCCTTCCAGCAGCCATACGGAAGTTAACGCAAA
 
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JMFS015D02+           CAAAACCCT                                                   
JMFS150F11+           CAAAACCCT                                                   
JMFS161C03+           CAAAACCCTAAATTCAACCTCAAAACCAAAAACCCTAACCCTAAAATCCCCCCCAAAAAA
                      ____________________________________________________________
consensus             CAAAACCCTAAATTCAACCTCAAAACCAAAAACCCTAACCCTAAAATCCCCCCCAAAAAA
 
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JMFS161C03+           AAGTCAATTCAATCTCCTACCGACCAAACCCTAAATCGACCCAACAAATCGAACCAATAA
                      ____________________________________________________________
consensus             AAGTCAATTCAATCTCCTACCGACCAAACCCTAAATCGACCCAACAAATCGAACCAATAA
 
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JMFS161C03+           AATCAGAAACCACAATCAAATTCAAAAGCAGCAACAAATCGAACTTTTTTTTTTTTTTTT
                      ____________________________________________________________
consensus             AATCAGAAACCACAATCAAATTCAAAAGCAGCAACAAATCGAACTTTTTTTTTTTTTTTT
 
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JMFS161C03+           TTGCTTTTTCGGAATCGCAAAATACAGAAATCGCAGAAACAGAAACCCTAGGAGTCTGAA
                      ____________________________________________________________
consensus             TTGCTTTTTCGGAATCGCAAAATACAGAAATCGCAGAAACAGAAACCCTAGGAGTCTGAA
 
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JMFS161C03+           GTCGAAAAGTTTCTCTATCGAACGCGATTGAGATCGAAAAACGCCTTACCGCAGCGAAGA
                      ____________________________________________________________
consensus             GTCGAAAAGTTTCTCTATCGAACGCGATTGAGATCGAAAAACGCCTTACCGCAGCGAAGA
 
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JMFS161C03+           TAGAGATATATGTGTATATATATTAGGAGGGATGGAGAGGCGGCGGCGGCGACGCGGCTT
                      ____________________________________________________________
consensus             TAGAGATATATGTGTATATATATTAGGAGGGATGGAGAGGCGGCGGCGGCGACGCGGCTT
 
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JMFS161C03+           CTGTAGAGAGAGAGATATGGGGGCTATTCTCCTTCTCTCGCGTATTCGCACGATGATAAA
                      ____________________________________________________________
consensus             CTGTAGAGAGAGAGATATGGGGGCTATTCTCCTTCTCTCGCGTATTCGCACGATGATAAA