Contig 009133:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008F17Sequence471009133 (3)gb|KDP41450.1|2e-25hypothetical protein JCGZ_15857 [Jatropha curcas]794008294 (5)gb|KDO81095.1|4e-51hypothetical protein CISIN_1g035790mg [Citrus sinensis]
JMFN043O02Sequence627009133 (3)ref|NP_001234722.1|2e-77LeTIR [Solanum lycopersicum] gb|ACY26209.1| LeTIR [Solanum lycopersicum]
JMFS155E11Sequence559009133 (3)

Alignment

This contig is upended


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JMFN043O02-                                                           CCAAATGAATAG
                      ____________________________________________________________
consensus                                                             CCAAATGAATAG
 
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JMFN043O02-           ATAAAAAAGAAGGTGTTTTACTGACCTGCACTGACTAGCAACGACGGAGAGTCCACTGGT
                      ____________________________________________________________
consensus             ATAAAAAAGAAGGTGTTTTACTGACCTGCACTGACTAGCAACGACGGAGAGTCCACTGGT
 
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JMFN043O02-           ACCAAATCCTTCGCAGCAGACGAGAATCAGCTCCTTGAAGTTGGGGAAAGAGCGAGACAG
                      ____________________________________________________________
consensus             ACCAAATCCTTCGCAGCAGACGAGAATCAGCTCCTTGAAGTTGGGGAAAGAGCGAGACAG
 
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JMFN043O02-           CACGACAAGATCATCGTCCGTAACAAACATGCGTTTAAGGTACACCTTCTCCAGCGCACA
                      ____________________________________________________________
consensus             CACGACAAGATCATCGTCCGTAACAAACATGCGTTTAAGGTACACCTTCTCCAGCGCACA
 
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JMFN043O02-           ATAAGCCTCGGCCATGGCGGCGACCCAGCGGGAGAAGTAGGCGCCCCAGTCCGGCGGGAG
                      ____________________________________________________________
consensus             ATAAGCCTCGGCCATGGCGGCGACCCAGCGGGAGAAGTAGGCGCCCCAGTCCGGCGGGAG
 
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JMFN043O02-           CAAGCTGAAATCGGCAAACCGGGGCTTACCCTTTATGCTCACCGATTTCACCCGCCCGAA
                      ____________________________________________________________
consensus             CAAGCTGAAATCGGCAAACCGGGGCTTACCCTTTATGCTCACCGATTTCACCCGCCCGAA
 
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JMFN043O02-           CCGCCGCGAAACCCGCTGCGGCGACACGGCGTAGCAGTTCCCGATGAACACCTCCGATCT
JMFF008F17+                              GGCGACACGGCGTAGCAGTTCCCGATGAACACCTCCGATCT
                      ____________________________________________________________
consensus             CCGCCGCGAAACCCGCTGCGGCGACACGGCGTAGCAGTTCCCGATGAACACCTCCGATCT
 
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JMFN043O02-           CGTCATCGCCTCCACCCGGTACCACGCCTTGCACACCAGCGCCGCCGCGTTGCGGTCGCG
JMFF008F17+           CGTCATCGCCTCCACCCGGTACCACGCCTTGCACACCAGCGCCGCCGCGTTGCGGTCGCG
                      ____________________________________________________________
consensus             CGTCATCGCCTCCACCCGGTACCACGCCTTGCACACCAGCGCCGCCGCGTTGCGGTCGCG
 
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JMFN043O02-           CCGGTCGGTGAGAAAGCACAGCACGTTCTCCAGCACATTCTCCAGGACCTGATC      
JMFF008F17+           CCGGTCGGTGAGAAAGCACAGCACGTTCTCCAGCACATTCTCCAGGACCTGATCCGGGCA
JMFS155E11+                                                    CCAGGACCTGATCCGGGCA
                      ____________________________________________________________
consensus             CCGGTCGGTGAGAAAGCACAGCACGTTCTCCAGCACATTCTCCAGGACCTGATCCGGGCA
 
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JMFF008F17+           CGGCCGCGCGTAGTAGTGGTTTCCGGCGCCGGCGCCGTCGTCCCCGAGATCGGAATCAGA
JMFS155E11+           CGGCCGCGCGTAGTAGTGGTTTCCGGCGCCGGCGCCGTCGTCCCCGAGATCGGAATCAGA
                      ____________________________________________________________
consensus             CGGCCGCGCGTAGTAGTGGTTTCCGGCGCCGGCGCCGTCGTCCCCGAGATCGGAATCAGA
 
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JMFF008F17+           AGAAGAAGGTATCGGGATCGGCGCCTTTTCCTCCGGCGACATTTCTGAGCATACATCAGC
JMFS155E11+           AGAAGAAGGTATCGGGATCGGCGCCTTTTCCTCCGGCGACATTTCTGAGCATACATCAGC
                      ____________________________________________________________
consensus             AGAAGAAGGTATCGGGATCGGCGCCTTTTCCTCCGGCGACATTTCTGAGCATACATCAGC
 
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JMFF008F17+           ACCCATTCTACCACTAAAATCACTACTTCTCACTCAACAAATCTTCTTCTTCTTCTTCAA
JMFS155E11+           ACCCATTCTACCACTAAAATCACTACTTCTCACTCAACAAATCTTCTTCTTCTTCTTCAA
                      ____________________________________________________________
consensus             ACCCATTCTACCACTAAAATCACTACTTCTCACTCAACAAATCTTCTTCTTCTTCTTCAA
 
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JMFF008F17+           TTCCTTCTCCCCAGATTCAATGATTCATCAACAACATTCCCAGAGGGTGCCTGGAAATCT
JMFS155E11+           TTCCTTCTCCCCAGATTCAATGATTCATCAACAACATTCCCAGAGGGTGCCTGGAAATCT
                      ____________________________________________________________
consensus             TTCCTTCTCCCCAGATTCAATGATTCATCAACAACATTCCCAGAGGGTGCCTGGAAATCT
 
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JMFF008F17+           ATATAAACAACTAATTAAGTAAATCAAAACCTTCAAATATTCATACCTCTACCTAGAC  
JMFS155E11+           ATATAAACAACTAATTAAGTAAATCAAAACCTTCAAATATTCATACCTCTACCCAGACAA
                      ____________________________________________________________
consensus             ATATAAACAACTAATTAAGTAAATCAAAACCTTCAAATATTCATACCTCTACCTAGACAA
 
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JMFS155E11+           GAAATGATTTAAAAATCGCATCTTTTTCAGATTATGAGTGGACTGAGACTGAAAGTAAAC
                      ____________________________________________________________
consensus             GAAATGATTTAAAAATCGCATCTTTTTCAGATTATGAGTGGACTGAGACTGAAAGTAAAC
 
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JMFS155E11+           AGGTTCAACGCAAGCTGAGCTGTGTGTGATCATGGAGGGGAATTCCATGTTCCTTTACTT
                      ____________________________________________________________
consensus             AGGTTCAACGCAAGCTGAGCTGTGTGTGATCATGGAGGGGAATTCCATGTTCCTTTACTT
 
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JMFS155E11+           CTAAGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTGGCTCACAAGTCAGTATGTCACA
                      ____________________________________________________________
consensus             CTAAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTGGCTCACAAGTCAGTATGTCACA
 
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JMFS155E11+           ACACATCTGCTTCCATTATTTCGTGCACTCAAGCATTTTTTTTTTTTTTACTGAATTTTG
                      ____________________________________________________________
consensus             ACACATCTGCTTCCATTATTTCGTGCACTCAAGCATTTTTTTTTTTTTTACTGAATTTTG