Contig 009130:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF045P21Sequence633009130 (4)ref|XP_004173110.1|2e-117PREDICTED: uncharacterized LOC101221472, partial [Cucumis sativus]640004129 (2)ref|XP_006344223.1|79.7PREDICTED: uncharacterized protein LOC102606280 [Solanum tuberosum]
JMFS028F10Sequence662009130 (4)ref|XP_004173110.1|1e-129PREDICTED: uncharacterized LOC101221472, partial [Cucumis sativus]
JMFS153H06Sequence623009130 (4)ref|XP_004173110.1|7e-86PREDICTED: uncharacterized LOC101221472, partial [Cucumis sativus]
JMSF014J07Sequence228009130 (4)ref|XP_002271170.1|106PREDICTED: uncharacterized protein LOC100242361 [Vitis vinifera] emb|CBI17699.3|789004129 (2)ref|XP_009797525.1|5e-28PREDICTED: uncharacterized protein LOC104243941 isoform X1 [Nicotiana sylvestri

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS028F10+                                                   TATATATATCACCCGTATAG
                      ____________________________________________________________
consensus                                                     TATATATATCACCCGTATAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS028F10+           TTGGTGGCCCAGTGAGCTCTATCTTCCCTTACTTCCTCGGTTTTTGAAAGCCACATGGGT
JMFF045P21+                                        TACTTCCTCGGTTTTTGAAAGCCACATGGGT
                      ____________________________________________________________
consensus             TTGGTGGCCCAGTGAGCTCTATCTTCCCTTACTTCCTCGGTTTTTGAAAGCCACATGGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS028F10+           GCCAAAGCACGAAGATCATCTATATGCATCGCCAGAAGCCCCCCAACCTTGTCACAAAGT
JMFF045P21+           GCCAAAGCACGAAGATCATCTATATGCATCGCCAGAAGCCCCCCAACCTTGTCACAAAGT
                      ____________________________________________________________
consensus             GCCAAAGCACGAAGATCATCTATATGCATCGCCAGAAGCCCCCCAACCTTGTCACAAAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS028F10+           TCAGGGTGTGTCGTGTGCAGTTTGGCAAGAACATTGTCGCATCCAACCAAGTACCCATAA
JMFF045P21+           TCAGGGTGTGTCGTGTGCAGTTTGGCAAGAACATTGTCGCATCCAACCAAGTACCCATAA
JMFS153H06+                                                CGCATCCAACCAAGTACCCATAA
                      ____________________________________________________________
consensus             TCAGGGTGTGTCGTGTGCAGTTTGGCAAGAACATTGTCGCATCCAACCAAGTACCCATAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS028F10+           TATGCGGCAACAGGCTTGCCTTTCTCAGCACCAAGCTCCCATGGTATGATTGGGCCTCGG
JMFF045P21+           TATGCGGCAACAGGCTTGCCTTTCTCAGCACCAAGCTCCCATGGTATGATTGGGCCTCGG
JMFS153H06+           TATGCGGCAACAGGCTTGCCTTTCTCAGCACCAAGCTCCCATGGTATGATTGGGCCTCGG
                      ____________________________________________________________
consensus             TATGCGGCAACAGGCTTGCCTTTCTCAGCACCAAGCTCCCATGGTATGATTGGGCCTCGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS028F10+           ATAATCATGTCTGCATCTAGAATAACAACCCAATCAACATTTTCTGCCTCTTTACTGTGC
JMFF045P21+           ATAATCATGTCTGCATCTAGAATAACAACCCAATCAACATTTTCTGCCTCTTTACTGTGC
JMFS153H06+           ATAATCATGTCTGCATCTAGAATAACAACCCAATCAACATTTTCTGCCTCTTTACTGTGC
                      ____________________________________________________________
consensus             ATAATCATGTCTGCATCTAGAATAACAACCCAATCAACATTTTCTGCCTCTTTACTGTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS028F10+           TTAAGCCAGTGGACAACACCAGCTGGTTTGTTAATTGCGGGATACCAATCACCAGTCTTG
JMFF045P21+           TTAAGCCAGTGGACAACACCAGCTGGTTTGTTAATTGCGGGATACCAATCACCAGTCTTG
JMFS153H06+           TTAAGCCAGTGGACAACACCAGCTGGTTTGTTAATTGCGGGATACCAATCACCAGTCTTG
                      ____________________________________________________________
consensus             TTAAGCCAGTGGACAACACCAGCTGGTTTGTTAATTGCGGGATACCAATCACCAGTCTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS028F10+           GGGTGTCTGCTCATGGAAGGGACCTCAAGAGTGGGAGCCAAGTCCATGCCTCCATAACTC
JMFF045P21+           GGGTGTCTGCTCATGGAAGGGACCTCAAGAGTGGGAGCCAAGTCCATGCCTCCATAACTC
JMFS153H06+           GGGTGTCTGCTCATGGAAGGGACCTCAAGAGTGGGAGCCAAGTCCATGCCTCCATAACTC
                      ____________________________________________________________
consensus             GGGTGTCTGCTCATGGAAGGGACCTCAAGAGTGGGAGCCAAGTCCATGCCTCCATAACTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS028F10+           TTCTTCTCCTCATCGGTGCAGCTCAGGAGTCGGGTAATCGGGCCGGGCTGCCCCGCCTTC
JMFF045P21+           TTCTTCTTCTCATCGGTGCAGCTCAGGAGTCGGGTAATCGGGCCGGGCTGCCCCGCCTTC
JMSF014J07+                    TCATCGGTGCAGCTCAGGAGTCGGGTAATCGGGCCGGGCTGCCCCGCCTTC
JMFS153H06+           TTCTTCTCCTCATCGGTGCAGCTCAGGAGTCGGGTAATCGGGCCGGGCTGCCCCGCCTTC
                      ____________________________________________________________
consensus             TTCTTCTCCTCATCGGTGCAGCTCAGGAGTCGGGTAATCGGGCCGGGCTGCCCCGCCTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS028F10+           CTGAAGCTGTGCATGAGCCCCACCGTCTGCCAATCGAAGTAGTTCTGGCACTCCACCGAG
JMFF045P21+           CTGAAGCTGTGCATGAGCCCCACCGTCTGCCAATCGAAGTAGTTCTGGCACTCCACCGAG
JMSF014J07+           CTGAAGCTGTGCATGAGCCCCACCGTCTGCCAATNGAAGTAGTTCTGGCACTCCACCGAG
JMFS153H06+           CTGAAGCTGTGCATGAGCCCCACCGTCTGCCAATCGAAGTAGTTCTGGCACTCCACCGAG
                      ____________________________________________________________
consensus             CTGAAGCTGTGCATGAGCCCCACCGTCTGCCAATCGAAGTAGTTCTGGCACTCCACCGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS028F10+           AACAGCGTGTGGATCCTCCATGGCGCCTCCTGGGATTGCGCCCACCCGCCACTGATCAGC
JMFF045P21+           AACAGCGTGTGGATCCTCCATGGCGCCTCCTGGGATTGCGCCCACCCGCCACTGATCAGC
JMSF014J07+           AACAGCGTGTGGATCCTCCATGGCGCCTCCTGGGATTGCGCCCACCCGCCANTGATCAGC
JMFS153H06+           AACAGCGTGTGGATCCTCCATGGCGCCTCCTGGGATTGCGCCCACCCGCCACTGATCAGC
                      ____________________________________________________________
consensus             AACAGCGTGTGGATCCTCCATGGCGCCTCCTGGGATTGCGCCCACCCGCCACTGATCAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS028F10+           GCCACCGCCACAACCACCAAGAATGCGGCAATTCTCGCCATC                  
JMFF045P21+           GCCACCGCCACAACCACCAAGAATGCGGCAATTCTCGCCATC                  
JMSF014J07+           GCCACCGCCACAACCACCAAGAATGCGGCAATTCTCGCCATCAGACC             
JMFS153H06+           GCCACCGCCACAACCACCAAGAATGCGGCAATTCTCGCCATCAGACCGCCAGAAATGGAA
                      ____________________________________________________________
consensus             GCCACCGCCACAACCACCAAGAATGCGGCAATTCTCGCCATCAGACCGCCAGAAATGGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS153H06+           ATGGGTATTGCTCAAACGATCTTAATTTCATGGTTTTGGCATTTTGTGCAAAAAAGTCAA
                      ____________________________________________________________
consensus             ATGGGTATTGCTCAAACGATCTTAATTTCATGGTTTTGGCATTTTGTGCAAAAAAGTCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS153H06+           TGCCTTTTTTTGGTGTTATTTTTTTTTTCTCAATCAAGTTCTTTTTCCCTGGTAAACTCA
                      ____________________________________________________________
consensus             TGCCTTTTTTTGGTGTTATTTTTTTTTTCTCAATCAAGTTCTTTTTCCCTGGTAAACTCA