Contig 009121:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS019F01Sequence557009121 (7)
JMFS023D07Sequence611009121 (7)
JMFS100H06Sequence609009121 (7)
JMFS130D04Sequence562009121 (7)
JMFS131C10Sequence618009121 (7)
JMFS144A11Sequence616009121 (7)
JMFS153F05Sequence616009121 (7)

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS130D04+                                   CTCTGCTTTCTCAACACACACTCAGAGGGGGAAGTT
                      ____________________________________________________________
consensus                                     CTCTGCTTTCTCAACACACACTCAGAGGGGGAAGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS130D04+           TGGACCTGGGAAGTCGCCATTTTTGTTCTCCTCAACAAATTTCTACGCAGAAAACAAGAT
JMFS131C10+                                              CAAATTTCTACGCAGAAAACAAGAT
JMFS153F05+                                                       ACGCAGAAAACAAGAT
JMFS100H06+                                                       ACGCAGAAAACAAGAT
JMFS023D07+                                                         GCAGAAAACAAGAT
JMFS144A11+                                                       ACGCAGAAAACAAGAT
                      ____________________________________________________________
consensus             TGGACCTGGGAAGTCGCCATTTTTGTTCTCCTCAACAAATTTCTACGCAGAAAACAAGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS130D04+           TATCAACAATGGTGTACGGCAGCCTCAAGATTTCAAACAGTTAATGCAGAGACTACAAAC
JMFS131C10+           TATCAACAATGGTGTACGGCAGCCTCAAGATTTCAAACAGTTAATGCAGAGACTACAAAC
JMFS153F05+           TATCAACAATGGTGTACGGCAGCCTCAAGATTTCAAACAGTTAATGCAGAGACTACAAAC
JMFS100H06+           TATCAACAATGGTGTACGGCAGCCTCAAGATTTCAAACAGTTAATGCAGAGACTACAAAC
JMFS023D07+           TATCAACAATGGTGTACGGCAGCCTCAAGATTTCAAACAGTTAATGCAGAGACTACAAAC
JMFS019F01+                                     AAGATTTCAAACAGTTAATGCAGAGACTACAAAC
JMFS144A11+           TATCAACAATGGGGTACGGCAGCCTCAAGATTTCAAACAGTTAATGCAGAGACTACAAAC
                      ____________________________________________________________
consensus             TATCAACAATGGTGTACGGCAGCCTCAAGATTTCAAACAGTTAATGCAGAGACTACAAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS130D04+           ATCCATCCTGAAAACCAAAGCTTCTTCTTCTCAGGTAAAAAAGGAAGGAAAATTTATCCA
JMFS131C10+           ATCCATCCTGAAAACCAAAGCTTCTTCTTCTCAGGTAAAAAAGGAAGGAAAATTTATCCA
JMFS153F05+           ATCCATCCTGAAAACCAAAGCTTCTTCTTCTCAGGTAAAAAAGGAAGGAAAATTTATCCA
JMFS100H06+           ATCCATCCTGAAAACCAAAGCTTCTTCTTCTCAGGTAAAAAAGGAAGGAAAATTTATCCA
JMFS023D07+           ATCCATCCTGAAAACCAAAGCTTCTTCTTCTCAGGTAAAAAAGGAAGGAAAATTTATCCA
JMFS019F01+           ATCCATCCTGAAAACCANAGCTTCTTCTTCTCAGGTAAAAAAGGAAGGAAAATTTATCCA
JMFS144A11+           ATCCATCCTGAAAACCAAAGCTTCTTCTTCTCAGGTAAAAAAGGAAGGAAAATTTATCCA
                      ____________________________________________________________
consensus             ATCCATCCTGAAAACCAAAGCTTCTTCTTCTCAGGTAAAAAAGGAAGGAAAATTTATCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS130D04+           TTCTTCTCTCCCCCTCCAGAAACCCGAAATTCGAACGAGAAACAGAGATTTCCGTGTTTC
JMFS131C10+           TTCTTCTCTCCCCCTCCAGAAACCCGAAATTCGAACGAGAAACAGAGATTTCCGTGTTTC
JMFS153F05+           TTCTTCTCTCCCCCTCCAGAAACCCGAAATTCGAACGAGAAACAGAGATTTCCGTGTTTC
JMFS100H06+           TTCTTCTCTCCCCCTCCAGAAACCCGAAATTCGAACGAGAAACAGAGATTTCCGTGTTTC
JMFS023D07+           TTCTTCTCTCCCCCTCCAGAAACCCGAAATTCGAACGAGAAACAGAGATTTCCGTGTTTC
JMFS019F01+           TTCTTCTCTCCCCCTCCAGAAACCCGAAATTCGAACGAGAAACAGAGATTTCCGTGTTTC
JMFS144A11+           TTCTTCTCTCCCCCTCCAGAAACCCGAAATTCGAACGAGAAACAGAGATTTCCGTGTTTC
                      ____________________________________________________________
consensus             TTCTTCTCTCCCCCTCCAGAAACCCGAAATTCGAACGAGAAACAGAGATTTCCGTGTTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS130D04+           TTTTCTTTATTTCTTGGAGCATTCATCAAATGTTCCCAGCTCAATTAGCTCCAGCACTTG
JMFS131C10+           TTTTCTTTATTTCTTGGAGCATTCATCAAATGTTCCCAGCTCAATTAGCTCCAGCACTTG
JMFS153F05+           TTTTCTTTATTTCTTGGAGCATTCATCAAATGTTCCCAGCTCAATTAGCTCCAGCACTTG
JMFS100H06+           TTTTCTTTATTTCTTGGAGCATTCATCAAATGTTCCCAGCTCAATTAGCTCCAGCACTTG
JMFS023D07+           TTTTCTTTATTTCTTGGAGGATTCATCAAATGTTCCCAGCTCAATTAGCTCCAGCACTTG
JMFS019F01+           TTTTCTTTATTTCTTGGAGCATTCATCAAATGTTCCCAGCTCAATTAGCTCCAGCACTTG
JMFS144A11+           TTTTCTTTATTTCTTGGAGCATTCATCAAATGTTCCCAGCTCAATTAGCTCCAGCACTTG
                      ____________________________________________________________
consensus             TTTTCTTTATTTCTTGGAGCATTCATCAAATGTTCCCAGCTCAATTAGCTCCAGCACTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS130D04+           CGCCGCAGCATGTTTAAGGATTTCCCCCATTACCATTCCCTGATTTGACCATTTTCTGAA
JMFS131C10+           CGCCGCAGCATGTTTAAGGATTTCCCCCATTACCATTCCCTGATTTGACCATTTTCTGAA
JMFS153F05+           CGCCGCAGCATGTTTAAGGATTTCCCCCATTACCATTCCCTGATTTGACCATTTTCTGAA
JMFS100H06+           CGCCGCAGCATGTTTAAGGATTTCCCCCATTACCATTCCCTGATTTGACCATTTTCTGAA
JMFS023D07+           CGCCGCAGCATGTTTAAGGATTTCCCCCATTACCATTCCCTGATTTGACCATTTTCTGAA
JMFS019F01+           CGCCGCAGCATGTTTAAGGATTTCCCCCATTACCATTCCCTGATTTGACCATTTTCTGAA
JMFS144A11+           CGCCGCAGCATGTTTAAGGATTTCCCCCATTACCATTCCCTGATTTGACCATTTTCTGAA
                      ____________________________________________________________
consensus             CGCCGCAGCATGTTTAAGGATTTCCCCCATTACCATTCCCTGATTTGACCATTTTCTGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS130D04+           TTTTCCAAGGAGAGAGAAAGAGAGAGAGGGAAACCAAACAGAAAATGTCAAAATTGAAAA
JMFS131C10+           TTTTCCAAGGAGAGAGAAAGAGAGAGAGGGAAACCAAACAGAAAATGTCAAAATTGAAAA
JMFS153F05+           TTTTCCAAGGAGAGAGAAAGAGAGAGAGGGAAACCAAACAGAAAATGTCAAAATTGAAAA
JMFS100H06+           TTTTCCAAGGAGAGAGAAAGAGAGAGAGGGAAACCAAACAGAAAATGTCAAAATTGAAAA
JMFS023D07+           TTTTCCAAGGAGAGAGAAAGAGAGAGAGGGAAACCAAACAGAAAATGTCAAAATTGAAAA
JMFS019F01+           TTTTCCAAGGAGAGAGAAAGAGAGAGAGGGAAACCAAACAGAAAATGTCAAAATTGAAAA
JMFS144A11+           TTTTCCAAGGAGAGAGAAAGAGAGAGAGGGAAACCAAACAGAAAATGTCAAAATTGAAAA
                      ____________________________________________________________
consensus             TTTTCCAAGGAGAGAGAAAGAGAGAGAGGGAAACCAAACAGAAAATGTCAAAATTGAAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS130D04+           CAAATGAAAGAAAGAGAAGGCTGCATATTGGACAGAAAAGTGCGGTTGTGGCGGGAATTC
JMFS131C10+           CAAATGAAAGAAAGAGAAGGCTGCATATTGGACAGAAAAGTGCGGTTGTGGCGGGAATTC
JMFS153F05+           CAAATGAAAGAAAGAGAAGGCTGCATATTGGACAGAAAAGTGCGGTTGTGGCGGGAATTC
JMFS100H06+           CAAATGAAAGAAAGAGAAGGCTGCATATTGGACAGAAAAGTGCGGTTGTGGCGGGAATTC
JMFS023D07+           CAAATGAAAGAAAGAGAAGGCTGCATATTGGACAGAAAAGTGCGGTTGTGGCGGGAATTC
JMFS019F01+           CAAATGAAAGAAAGAGAAGGCTGCATATTGGACAGAAAAGTGCGGTTGTGGCGGGAATTC
JMFS144A11+           CAAATGAAAGAAAGAGAAGGCTGCATATTGGACAGAAAAGTGCGGTTGTGGCGGGAATTC
                      ____________________________________________________________
consensus             CAAATGAAAGAAAGAGAAGGCTGCATATTGGACAGAAAAGTGCGGTTGTGGCGGGAATTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS130D04+           ACAGAAGACTCCATGGGTATAGCCCAGAAAACGAACACAAACAAAC              
JMFS131C10+           ACAGAAGACTCCATGGGTATAGCCCAGAAAACGAACACAAACAAACAAAAAATCAAAGAG
JMFS153F05+           ACAGAAGACTCCATGGGTATAGCCCAGAAAACGAACACAAACAAACAAAAAATCAAAGAG
JMFS100H06+           ACAGAAGACTCCATGGGTATAGCCCAGAAAACGAACACAAACAAACAAAAAATCAAAGAG
JMFS023D07+           ACAGAAGACTCCATGGGTATAGCCCAGAAAACGAACACAAACAAACAAAAAATCAAAGAG
JMFS019F01+           ACAGAAGACTCCATGGGTATAGCCCAGAAAACGAACACAAACAAACAAAAAATCAAAGAG
JMFS144A11+           ACAGAAGACTCCATGGGTATAGCCCAGAAAACGAACACAAACAAACAAAAAATCAAAGAG
                      ____________________________________________________________
consensus             ACAGAAGACTCCATGGGTATAGCCCAGAAAACGAACACAAACAAACAAAAAATCAAAGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS131C10+           CTTTCCGACGAAAGATCTCAGGGAAGACGAAGGCAAAGGACAATGGGGAAATTGCTGCGT
JMFS153F05+           CTTTCCGACGAAAGATCTCAGGGAAGACGAAGGCAAAGGACAATGGGGAAATTGCTGCGT
JMFS100H06+           CTTTCCGACGAAAGATCTCAGGGAAGACGAAGGCAAAGGACAATGGGGAAATTGCTGCGT
JMFS023D07+           CTTTCCGACGAAAGATCTCAGGGAAGACGAAGGCAAAGGACAATGGGGAAATTGCTGCGT
JMFS019F01+           CTTTCCGACGAAAGATCTCAGGGAAGACGAAGGCAAAGGACAATGGGGAAATTGCTGCGT
JMFS144A11+           CTTTCCGACGAAAGATCTCAGGGAAGACGAAGGCAAAGGACAATGGGGAAATTGCTGCGT
                      ____________________________________________________________
consensus             CTTTCCGACGAAAGATCTCAGGGAAGACGAAGGCAAAGGACAATGGGGAAATTGCTGCGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS131C10+           TTAAGTCCAAAAATGTTAGGCATGCGCCGGGGTGGGTGGGTGGGTAGATCATA       
JMFS153F05+           TTAAGTCCAAAAATGTTAGGCATGCGCCGGGGTGGGTGGGTGGGTAGATCATA       
JMFS100H06+           TTAAGTCCAAAAATGTTAGGCATGCGCCGGGGTGGGTGGGTGGGTAGATCATA       
JMFS023D07+           TTAAGTCCAAAAATGTTAGGCATGCGCCGGGGTGGGTGGGTGGGTAGATCATA       
JMFS019F01+           TTAAGTCCAAAAATGTTAGGCATGCGCCGGGGTGGGTGGGTGG                 
JMFS144A11+           TTAAGTCCAAAAATGTTAGGCATGCGCCGGGGTGGGTGGGTGGGTAGATCATAGATGTAA
                      ____________________________________________________________
consensus             TTAAGTCCAAAAATGTTAGGCATGCGCCGGGGTGGGTGGGTGGGTAGATCATAGATGTAA