Contig 009117:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012A17Sequence589009117 (12)emb|CDP09484.1|8e-106unnamed protein product [Coffea canephora]805002749 (10)dbj|BAC22124.1|2e-118t-complex polypeptide 1 [Bruguiera sexangula]
JMFF028J13Sequence560009117 (12)emb|CDP09484.1|5e-98unnamed protein product [Coffea canephora]628002749 (10)ref|XP_010089252.1|3e-77T-complex protein 1 subunit alpha [Morus notabilis] gb|EXB37577.1| T-complex pro
JMFF029K01Sequence437009117 (12)gb|KDO55004.1|3e-66hypothetical protein CISIN_1g015935mg [Citrus sinensis]747002749 (10)ref|XP_010089252.1|3e-101T-complex protein 1 subunit alpha [Morus notabilis] gb|EXB37577.1| T-complex pro
JMFF037N03Sequence597009117 (12)gb|KDO55004.1|6e-107hypothetical protein CISIN_1g015935mg [Citrus sinensis]762002749 (10)ref|XP_010089252.1|1e-112T-complex protein 1 subunit alpha [Morus notabilis] gb|EXB37577.1| T-complex pro
JMFF044A21Sequence628009117 (12)gb|KDO55004.1|3e-113hypothetical protein CISIN_1g015935mg [Citrus sinensis]582002749 (10)ref|XP_010089252.1|2e-64T-complex protein 1 subunit alpha [Morus notabilis] gb|EXB37577.1| T-complex pro
JMFS139C12Sequence627009117 (12)gb|KDO55004.1|8e-118hypothetical protein CISIN_1g015935mg [Citrus sinensis]
JMFS140B07Sequence623009117 (12)emb|CDP09484.1|1e-104unnamed protein product [Coffea canephora]
JMSF002F16Sequence264009117 (12)gb|KDO55004.1|1e-24hypothetical protein CISIN_1g015935mg [Citrus sinensis]769002749 (10)ref|XP_010089252.1|8e-104T-complex protein 1 subunit alpha [Morus notabilis] gb|EXB37577.1| T-complex pro
JMSF019H12Sequence541009117 (12)emb|CDP09484.1|2e-93unnamed protein product [Coffea canephora]774002749 (10)dbj|BAC22124.1|1e-118t-complex polypeptide 1 [Bruguiera sexangula]
JMSF021D05Sequence664009117 (12)emb|CDP09484.1|3e-123unnamed protein product [Coffea canephora]588015026ref|XP_002265581.2|159PREDICTED: uncharacterized protein LOC100263463 [Vitis vinifera]
JMSF029G02Sequence661009117 (12)gb|KDO55004.1|7e-120hypothetical protein CISIN_1g015935mg [Citrus sinensis]755002749 (10)ref|XP_010089252.1|2e-115T-complex protein 1 subunit alpha [Morus notabilis] gb|EXB37577.1| T-complex pro
JMSF052C06Sequence664009117 (12)emb|CDP09484.1|2e-123unnamed protein product [Coffea canephora]896002749 (10)dbj|BAC22124.1|1e-133t-complex polypeptide 1 [Bruguiera sexangula]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS139C12+ GCTTGTACTGC
JMFF044A21+ ACTGC
JMSF021D05+ TCGGGCATTAGTCATCTTAACCGCTTGTACTGC
JMSF052C06+ TCGGGCATTAGTCATCTTAACCGCTTGTACTGC
JMSF029G02+ GCTTGTACTGC
                      ____________________________________________________________
consensus TCGGGCATTAGTCATCTTAACCGCTTGTACTGC
 
. : . : . : . : . : . :
JMFS139C12+ TTCAACAACCAGGTTTGCAAAGAAATCACTGTCACCAGAAATCAACTTTGATGACATGCT
JMFF044A21+ TTCAACAACCAGGTTGCANAAGAAATCACTGTCACCAGAAATCAACTNTGATGACATGCT
JMFF012A17+ TCAACTTTGATGACATGCT
JMSF021D05+ TTCAACAACCAGGTTTGCAAAGAAATCACTGTCACCAGAAATCAACTTTGATGACATGCT
JMFF037N03+ ACCAGAAATCAACTTTGATGACATGCT
JMSF052C06+ TTCAACAACCAGGTTTGCAAAGAAATCACTGTCACCAGAAATCAACTTTGATGACATGCT
JMSF029G02+ TTCAACAACCAGGTTTGCAAAGAAATCACTGTCACCAGAAATCAACTTTGATGACATGCT
JMFS140B07+ GAAATCAACTTTGATGACATGCT
                      ____________________________________________________________
consensus TTCAACAACCAGGTTTGCAAAGAAATCACTGTCACCAGAAATCAACTTTGATGACATGCT
 
. : . : . : . : . : . :
JMFS139C12+ TGTCTTGGCACAATTTATGAGGGAATCCTTTCCAAGTTTTTCAACCTTCACAGCCAGTTT
JMFF044A21+ TGTCTTGGCACAATTTATGAGGGAATCCTTTCCAAGTTTTTCAACCTTCACAGCCAGTTT
JMFF012A17+ TGTCTTGGCACAATTTATGAGGGAATCCTTTCCAAGTTTTTCAACCTTCACAGCCAGTTT
JMSF021D05+ TGTCTTGGCACAATTTATGAGGGAATCCTTTCCAAGTTTTTCAACCTTCACAGCCAGTTT
JMFF037N03+ TGTCTTGGCACAATTTATGAGGGAATCCTTTCCAAGTTTTTCAACCTTCACAGCCAGTTT
JMFF028J13+ CAATTTATGAGGGAATCCTTTCCAAGTTTTTCAACCTTCACAGCCAGTTT
JMSF019H12+ TCCAAGTTTTTCAACCTTCACAGCCAGTTT
JMSF052C06+ TGTCTTGGCACAATTTATGAGGGAATCCTTTCCAAGTTTTTCAACCTTCACAGCCAGTTT
JMSF029G02+ TGTCTTGGCACAATTTATGAGGGAATCCTTTCCAAGTTTTTCAACCTTCACAGCCAGTTT
JMFS140B07+ TGTCTTGGCACAATNTATGAGGGAATCCTTTCCAAGTTTTTCAACCTTCACAGCCAGTTT
                      ____________________________________________________________
consensus TGTCTTGGCACAATTTATGAGGGAATCCTTTCCAAGTTTTTCAACCTTCACAGCCAGTTT
 
. : . : . : . : . : . :
JMFS139C12+ CTCTTCAACATACTTACAAGCTTCTCTCATTGCAAGTCTGTATCCACTGATTATTGAAGT
JMFF044A21+ CTCTTCAACATACTTACAAGCTTCTCTCATTGCAAGTCTGTATCCACTGATTATTGAAGT
JMFF012A17+ CTCTTCAACATACTTACAAGCTTCTCTCATTGCAAGTCTGTATCCACTGATTATTGAAGT
JMSF021D05+ CTCTTCAACATACTTACAAGCTTCTCTCATTGCAAGTCTGTATCCACTGATTATTGAAGT
JMFF037N03+ CTCTTCAACATACTTACAAGCTTCTCTCATTGCAAGTCTGTATCCACTGATTATTGAAGT
JMFF028J13+ CTCTTCAACATACTTACAAGCTTCTCTCATTGCAAGTCTGTATCCACTGATTATTGAAGT
JMSF019H12+ CTCTTCAACATACTTACAAGCTTCTCTCATTGCAAGTCTGTATCCACTGATTATTGAAGT
JMSF052C06+ CTCTTCAACATACTTACAAGCTTCTCTCATTGCAAGTCTGTATCCACTGATTATTGAAGT
JMSF029G02+ CTCTTCAACATACTTACAAGCTTCTCTCATTGCAAGTCTGTATCCACTGATTATTGAAGT
JMFS140B07+ CTCTTCAACATACTTACAAGCTTCTCTCATTGCAAGTCTGTATCCACTGATTATTGAAGT
                      ____________________________________________________________
consensus CTCTTCAACATACTTACAAGCTTCTCTCATTGCAAGTCTGTATCCACTGATTATTGAAGT
 
. : . : . : . : . : . :
JMFS139C12+ GGGGTGAATTTTGTTCCGCACCAAGTCATTTGCTCTCTTGAGCAACTCTGCAGCTATGAT
JMFF044A21+ GGGGTGAATTTTGTTCCGCACCAAGTCATTTGCTCTCTTGAGCAACTCTGCAGCTATGAT
JMFF012A17+ GGGGTGAATTTTGTTCCGCACCAAGTCATTTGCTCTCTTGAGCAACTCTGCAGCTATGAT
JMSF021D05+ GGGGTGAATTTTGTTCCGCACCAAGTCATTTGCTCTCTTGAGCAACTCTGCAGCTATGAT
JMFF037N03+ GGGGTGAATTTTGTTCCGCACCAAGTCATTTGCTCTCTTGAGCAACTCTGCAGCTATGAT
JMFF028J13+ GGGGTGAATTTTGTTCCGCACCAAGTCATTTGCTCTCTTGAGCAACTCTGCAGCTATGAT
JMSF019H12+ GGGGTGAATTTTGTTCCGCACCAAGTCATTTGCTCTCTTGAGCAACTCTGCAGCTATGAT
JMFF029K01+ TTCCGCACCAAGTCATTTGCTCTCTTGAGCAACTCTGCAGCTATGAT
JMSF052C06+ GGGGTGAATTTTGTTCCGCACCAAGTCATTTGCTCTCTTGAGCAACTCTGCAGCTATGAT
JMSF029G02+ GGGGTGAATTTTGTTCCGCACCAAGTCATTTGCTCTCTTGAGCAACTCTGCAGCTATGAT
JMFS140B07+ GGGGTGAATTTTGTTCCGCACCAAGTCATTTGCTCTCTTGAGCAACTCTGCAGCTATGAT
                      ____________________________________________________________
consensus GGGGTGAATTTTGTTCCGCACCAAGTCATTTGCTCTCTTGAGCAACTCTGCAGCTATGAT
 
. : . : . : . : . : . :
JMFS139C12+ GACTACAGAAGTAGTTCCATCACCAACTTCCCGGTCTTGAAGCTCCGCCAACTCAACAAG
JMFF044A21+ GACTACAGAAGTAGTTCCATCACCAACTTCCCGGTCTTGAAGCTCCGCCAACTCAACAAG
JMFF012A17+ GACTACAGAAGTAGTTCCATCACCAACTTCCCGGTCTTGAAGCTCCGCCAACTCAACAAG
JMSF021D05+ GACTACAGAAGTAGTTCCATCACCAACTTCCCGGTCTTGAAGCTCCGCCAACTCAACAAG
JMFF037N03+ GACTACAGAAGTAGTTCCATCACCAACTTCCCGGTCTTGAAGCTCCGCCAACTCAACAAG
JMFF028J13+ GACTACAGAAGTAGTTCCATCACCAACTTCCCGGTCTTGAAGCTCCGCCAACTCAACAAG
JMSF019H12+ GACTACAGAAGTAGTTCCATCACCAACTTCCCGGTCTTGAAGCTCCGCCAACTCAACAAG
JMFF029K01+ GACTACAGAAGTAGTTCCATCACCAACTTCCCGGTCTTGAAGCTCCGCCAACTCAACAAG
JMSF052C06+ GACTACAGAAGTAGTTCCATCACCAACTTCCCGGTCTTGAAGCTCCGCCAACTCAACAAG
JMSF029G02+ GACTACAGAAGTAGTTCCATCACCAACTTCCCGGTCTTGAAGCTCCGCCAACTCAACAAG
JMFS140B07+ GACTACAGAAGTAGTTCCATCACCAACTTCCCGGTCTTGAAGCTCCGCCAACTCAACAAG
                      ____________________________________________________________
consensus GACTACAGAAGTAGTTCCATCACCAACTTCCCGGTCTTGAAGCTCCGCCAACTCAACAAG
 
. : . : . : . : . : . :
JMFS139C12+ AACCTTGGCTGCTGGATGCTCAACTTCTAACATCTTCAGAATAGTAGCACCATCATTTGT
JMFF044A21+ AACCTTGGCTGCTGGATGCTCAACTTCTAACATCTTCAGAATAGTAGCACCATCATTTGT
JMFF012A17+ AACCTTGGCTGCTGGATGCTCAACTTCTAACATCTTCAGAATAGTAGCACCATCATTTGT
JMSF021D05+ AACCTTGGCTGCTGGATGCTCAACTTCTAACATCTTCAGAATAGTAGCACCATCATTTGT
JMFF037N03+ AACCTTGGCTGCTGGATGCTCAACTTCTAACATCTTCAGAATAGTAGCACCATCATTTGT
JMFF028J13+ AACCTTGGCTGCTGGATGCTCAACTTCTAACATCTTCAGAATAGTAGCACCATCATTTGT
JMSF019H12+ AACCTTGGCTGCTGGATGCTCAACTTCTAACATCTTCAGAATAGTAGCACCATCATTTGT
JMFF029K01+ AACCTTGGCTGCTGGATGCTCAACTTCTAACATCTTCAGAATAGTAGCACCATCATTTGT
JMSF052C06+ AACCTTGGCTGCTGGATGCTCAACTTCTAACATCTTCAGAATAGTAGCACCATCATTTGT
JMSF029G02+ AACCTTGGCTGCTGGATGCTCAACTTCTAACATCTTCAGAATAGTAGCACCATCATTTGT
JMFS140B07+ AACCTTGGCTGCTGGATGCTCAACTTCTAACATCTTCAGAATAGTAGCACCATCATTTGT
                      ____________________________________________________________
consensus AACCTTGGCTGCTGGATGCTCAACTTCTAACATCTTCAGAATAGTAGCACCATCATTTGT
 
. : . : . : . : . : . :
JMFS139C12+ GATTGTTACATCACCAATATCATCAACAAGCATCTTATCGAGCCCGACGGGACCAAGTGA
JMFF044A21+ GATTGTTACATCACCAATATCATCAACAAGCATCTTATCGAGCCCGACGGGACCAAGTGA
JMFF012A17+ GATTGTTACATCACCAATATCATCAACAAGCATCTTATCGAGCCCGACGGGACCAAGTGA
JMSF021D05+ GATTGTTACATCACCAATATCATCAACAAGCATCTTATCGAGCCCGACGGGACCAAGTGA
JMFF037N03+ GATTGTTACATCACCAATATCATCAACAAGCATCTTATCGAGCCCGACGGGACCAAGTGA
JMFF028J13+ GATTGTTACATCACCAATATCATCAACAAGCATCTTATCGAGCCCGACGGGACCAAGTGA
JMSF019H12+ GATTGTTACATCACCAATATCATCAACAAGCATCTTATCGAGCCCGACGGGACCAAGTGA
JMFF029K01+ GATTGTTACATCACCAATATCATCAACAAGCATCTTATCGAGCCCGACGGGACCAAGTGA
JMSF002F16+ ACATCACCAATATCATCAACAAGCATCTTATCGAGCCCGACGGGACCAAGTGA
JMSF052C06+ GATTGTTACATCACCAATATCATCAACAAGCATCTTATCGAGCCCGACGGGACCAAGTGA
JMSF029G02+ GATTGTTACATCACCAATATCATCAACAAGCATCTTATCGAGCCCGACGGGACCAAGTGA
JMFS140B07+ GATTGTTACATCACCAATATCATCAACAAGCATCTTATCGAGCCCGGCGGGACCAAGTGA
                      ____________________________________________________________
consensus GATTGTTACATCACCAATATCATCAACAAGCATCTTATCGAGCCCGACGGGACCAAGTGA
 
. : . : . : . : . : . :
JMFS139C12+ CGACTTAACGATGTTTGCCACTGCTTGGCATGCCATTACATTTTGGGTTCGGACATCCTG
JMFF044A21+ CGACTTAACGATGTTTGCCACTGCTTGGCATGCCATTACATTTTGGGTTCGGACATCCTG
JMFF012A17+ CGACTTAACGATGTTTGCCACTGCTTGGCATGCCATTACATTTTGGGTTCGGACATCCTG
JMSF021D05+ CGACTTAACGATGTTTGCCACTGCTTGGCATGCCATTACATTTTGGGTTCGGACATCCTG
JMFF037N03+ CGACTTAACGATGTTTGCCACTGCTTGGCATGCCATTACATTTTGGGTTCGGACATCCTG
JMFF028J13+ CGACTTAACGATGTTTGCCACTGCTTGGCATGCCATTACATTTTGGGTTCGGACATCCTG
JMSF019H12+ CGACTTAACGATGTTTGCCACTGCTTGGCATGCCATTACATTTTGGGTTCGGACATCCTG
JMFF029K01+ CGACTTAACGATGTTTGCCACTGCTTGGCATGCCATTACATTTTGGGTTCGGACATCCTG
JMSF002F16+ CGACTTAACGATGTTTGCCACTGCTTGGCATGCCATTACATTTTGGGTTCGGACATCCTG
JMSF052C06+ CGACTTAACGATGTTTGCCACTGCTTGGCATGCCATTACATTTTGGGTTCGGACATCCTG
JMSF029G02+ CGACTTAACGATGTTTGCCACTGCTTGGCATGCCATTACATTTTGGGTTCGGACATCCTG
JMFS140B07+ CGACTTAACGATGTTTGCCACTGCTTGGCATGCCATTACATTTTGGGTTCGGACATCCTG
                      ____________________________________________________________
consensus CGACTTAACGATGTTTGCCACTGCTTGGCATGCCATTACATTTTGGGTTCGGACATCCTG
 
. : . : . : . : . : . :
JMFS139C12+ GCCGGACTGCCGTTCGCCGGAAATATCGAGAGTTTGGCCCGCAAGCGCCATCCGTGTGAA
JMFF044A21+ GCCGGACTGCCGTTCGCCGGAAATATCGAGAGTTTGGCCCGCAAGCGCCATCCGTGTGAA
JMFF012A17+ GCCGGACTGCCGTTCGCCGGAAATATCGAGAGTTTGGCCCGCAAGCGCCATCCGTGTGAA
JMSF021D05+ GCCGGACTGCCGTTCGCCGGAAATATCGAGAGTTTGGCCCGCAAGCGCCATCCGTGTGAA
JMFF037N03+ GCCGGACTGCCGTTCGCCGGAAATATCGAGAGTTTGGCCCGCAAGCGCCATCCGTGTGAA
JMFF028J13+ GCCGGACTGCCGTTCGCCGGAAATATCGAGAGTTTGGCCCGCAAGCGCCATCCGTGTGAA
JMSF019H12+ GCCGGACTGCCGTTCGCCGGAAATATCGAGAGTTTGGCCCGCAAGCGCCATCCGTGTGAA
JMFF029K01+ GCCGGACTGCCGTTCGCCGGAAATATCGAGAGTTTGGCCCGCAAGCGCCATCCGTGTGAA
JMSF002F16+ GCCGGACTGCCGTTCGCCGGAAATATCGAGAGTTTGGCCCGCAAGCGCCATCCGTGTGAA
JMSF052C06+ GCCGGACTGCCGTTCGCCGGAAATATCGAGAGTTTGGCCCGCAAGCGCCATCCGTGTGAA
JMSF029G02+ GCCGGACTGCCGTTCGCCGGAAATATCGAGAGTTTGGCCCGCAAGCGCCATCCGTGTGAA
JMFS140B07+ GCCGGACTGCCGTTCGCCGGAAATATCGAGAGTTTGGCCCGCAAGCGCCATCCGTGTGAA
                      ____________________________________________________________
consensus GCCGGACTGCCGTTCGCCGGAAATATCGAGAGTTTGGCCCGCAAGCGCCATCCGTGTGAA
 
. : . : . : . : . : . :
JMFS139C12+ GATCGAGAGAGTGAGTGTTGGTGGAGACGGTTCTGGAAGGATGGAAAAACCCTGGATCGA
JMFF044A21+ GATCGAGAGAGTGAGTGTTGGTGGAGACGGTTCTGGAAGGATGGAAAAACCCTGGATCGA
JMFF012A17+ GATCGAGAGAGTGAGTGTTGGTGGAGACGGTTCTGGAAGGATGGAAAAACCCTGGATCGA
JMSF021D05+ GATCGAGAGAGTGAGTGTTGGTGGAGACGGTTCTGGAAGGATGGAAAAACCCTGGATCGA
JMFF037N03+ GATCGAGAGAGTGAGTGTTGGTGGAGACGGTTCTGGAAGGATGGAAAAACCCTGGATCGA
JMFF028J13+ GATCGAGAGAGTGAGTGTTGGTGGAGACGGTTCTGGAAGGATGGAAAAACCCTGGATCGA
JMSF019H12+ GATCGAGAGAGTGAGTGTTGGTGGAGACGGTTCTGGAAGGATGGAAAAACCCTGGATCGA
JMFF029K01+ GATCGAGAGAGTGAGTGTTGGTGGAGACGGTTCTGGAAGGATGGAAAAACCCTGGATCGA
JMSF002F16+ GATCGAGAGAGTGAGTGTTGGTGGAGACGGTTCTGGAAGGATGGAAAAACCCTGGATCGA
JMSF052C06+ GATCGAGAGAGTGAGTGTTGGTGGAGACGGTTCTGGAAGGATGGAAAAACCCTGGATCGA
JMSF029G02+ GATCGAGAGAGTGAGTGTTGGTGGAGACGGTTCTGGAAGGATGGAAAAACCCTGGATCGA
JMFS140B07+ GATCGAGAGAGTGAGTGTTGGTGGAGACGGTTCTGGAAGGATGGAAAAACCCTGGATCGA
                      ____________________________________________________________
consensus GATCGAGAGAGTGAGTGTTGGTGGAGACGGTTCTGGAAGGATGGAAAAACCCTGGATCGA
 
. : . : . : . : . : . :
JMFS139C12+ CCTTTGAAAGAAATAA
JMFF044A21+ CCTTTGAAAGAAATAAGCGCTGT
JMFF012A17+ CCTTTGAAAGAAATAAGCGCTGTGTA
JMSF021D05+ CCTTTGAAAGAAATAAGCGCTGTGTATAC
JMFF037N03+ CCTTTGAAAGAAATAAGCGCTGTGTATACT
JMFF028J13+ CCTTTGAAAGAAATAAGCGCTGTGTATACT
JMSF019H12+ CCTTTGAAAGAAATAAGCGCTGTGTATAC
JMFF029K01+ CCTTTGAAAGAAATAAGCGCTGTGTATACT
JMSF002F16+ CCTTTGAAAGAAATAAGCGCTGTGTATACT
JMSF052C06+ CCTTTGAAAGAAATAAGCGCTGTGTATACT
JMSF029G02+ CCTTTGAAAGAAATAAGCGCTGTGTATACTGAAAACCTCGG
JMFS140B07+ CCTTTGAAAGAAATAAGCGCTGTGTATACTGAAAACCTCGGCAGAGCAACTGAGGTTTTT
                      ____________________________________________________________
consensus CCTTTGAAAGAAATAAGCGCTGTGTATACTGAAAACCTCGGCAGAGCAACTGAGGTTTTT