Contig 009112:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF045A23+                                                                  GCCG
rJMFF008K18+            CCCCATGCTGCACTCAAACTACAAATTCAGTNTCCTCAGCTNTGNTAATCCAGCGCCG
                      ____________________________________________________________
consensus               CCCCATGCTGCACTCAAACTACAAATTCAGTNTCCTCAGCTNTGNTAATCCAGCGCCG
 
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rJMFF045A23+          CCCGCCGCCGTTTTATACCCTCAGAACCTCCCAGCT-CCGACGGGTGGCTTCGCCAGCGA
rJMFF008K18+          CCCGCCGCCGTTTTATACCCTCAGAACCTCCCAGCTNCCGACGGGTGGCTTCGCCAGCGA
                      ____________________________________________________________
consensus             CCCGCCGCCGTTTTATACCCTCAGAACCTCCCAGCTNCCGACGGGTGGCTTCGCCAGCGA
 
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rJMFF045A23+          CGGCCTCTTTTACTCGGCTTTCATGGACAACGCTACTGTTGCGAAGCAGCAGGTGAACAC
rJMFF008K18+          CGGCCTCTTCTACTCGGCTTTCATGGACAACGCTACTGTTGCGAAGCAGCAGGTGAACAC
JMFS137B11-                                     ACAACACTACTGTTGCGAAGCAGCAGGTGAACAC
                      ____________________________________________________________
consensus             CGGCCTCTTTTACTCGGCTTTCATGGACAACGCTACTGTTGCGAAGCAGCAGGTGAACAC
 
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rJMFF045A23+          TCCCGCGTTGAAAGTGGAACAGACATCGTACAACAACGTCAGCGGGTCGCAGGAGACGGG
rJMFF008K18+          TCCCGCGTTGAAAGTGGAACAGACATCGTACAACAACGTCAGCGGGTCGCAGGAGACGGG
JMFS137B11-           TCCCGCGTTGAAAGTGGAACAGACATCGTACAACAACGTCAGCGGGTCGCAGGAGACGGG
                      ____________________________________________________________
consensus             TCCCGCGTTGAAAGTGGAACAGACATCGTACAACAACGTCAGCGGGTCGCAGGAGACGGG
 
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rJMFF045A23+          GCTCAGCATGGAGGTGATGGCGGCCAACACAGAGACAACCTCGGCGCTGTCCAAGTTGAA
rJMFF008K18+          GCTCAGCATGGAGGTGATGGCGGCCAACACAGAGACAACCTCGGCGCTGTCCAAGTTGAA
JMFS137B11-           GCTCAGCATGGAGGTGATGGCGGCCAACACAGAGACAACCTCGGCGCTGTCCAAGTTGAA
                      ____________________________________________________________
consensus             GCTCAGCATGGAGGTGATGGCGGCCAACACAGAGACAACCTCGGCGCTGTCCAAGTTGAA
 
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rJMFF045A23+          GCAGATAATCGTCGCCGATGATCAGAGCAGCCCTAGGCCGTTCGATGATCTGGACACCGA
rJMFF008K18+          GCAGATAATCGTCGCCGATGATCAGAGCAGCCCTAGGCCGTTCGATGATCTGGACACCGA
JMFS137B11-           GCAGATAATCGTCGCCGATGATCAGAGCAGCCCTAGGCCGTTCGATGATCTGGACACCGA
                      ____________________________________________________________
consensus             GCAGATAATCGTCGCCGATGATCAGAGCAGCCCTAGGCCGTTCGATGATCTGGACACCGA
 
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rJMFF045A23+          CCCAAGCTATCACGACGGCGACATGGACGACGATCTCGATCCTTACTCATTTTGGGACGA
rJMFF008K18+          CCCAAGCTATCACGACGGCGACATGGACGACGATCTCGATCCTTACTCATTTTGGGACGA
JMFS137B11-           CCCAAGCTATCACGACGGCGACATGGACGACGATCTCGATCCTTACTTATTTTGGGACGA
                      ____________________________________________________________
consensus             CCCAAGCTATCACGACGGCGACATGGACGACGATCTCGATCCTTACTCATTTTGGGACGA
 
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rJMFF045A23+          CGATCTCCACTACGGCCCTGAAGATCCATGAAGAATACAATAGAATTACCGGCCAACGCA
rJMFF008K18+          CGATCTCCACTACGGCCCTGAAGATCCATGAAGAATACAATAGAATTACCGGCCAACGCA
JMFS137B11-           CGATCTCCACTACGGCCCTGAAGATCCATGAAGAATACAATAGAATTACCGGCCAACGCA
                      ____________________________________________________________
consensus             CGATCTCCACTACGGCCCTGAAGATCCATGAAGAATACAATAGAATTACCGGCCAACGCA
 
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rJMFF045A23+          TACAGACAACAAAAAACAAAAAATAAAAATCAGTGCTGTTAATTAATTAATTCATACATG
rJMFF008K18+          TACAGACAACAAAAAACAAAAAATAAAAATCAGTGCTGTTAATTAATTAATTCATACATG
JMFS137B11-           TACAGACAACAAAAAACAAAAAATAAAAATCAGTGCTGTTAATTAATTAATTCATACATG
                      ____________________________________________________________
consensus             TACAGACAACAAAAAACAAAAAATAAAAATCAGTGCTGTTAATTAATTAATTCATACATG
 
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rJMFF045A23+          TTTCAAAAAAAATAAAAAATAAAAAAATTCAGA                           
rJMFF008K18+          TTTCAAAAAAAATAAAAAATAAAAAAATTCAGACATTGTACGTACATAGGTGGTAGTTAT
JMFS137B11-           TTTCAAAAAAAATAAAAAATAAAAAAATTCAGACATTGTACGTACATAGGTGGTAGTTAT
                      ____________________________________________________________
consensus             TTTCAAAAAAAATAAAAAATAAAAAAATTCAGACATTGTACGTACATAGGTGGTAGTTAT
 
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rJMFF008K18+          TCTCAATTATTCGTTTAATTTTTCAAAGATGGAAAATGATTTATTTTCGACCTACTCGCT
JMFS137B11-           TCTCAATTATTCGTTTAATTTTTCAAAGATGGAAAATGATTTATTTTCGACCTACTCGCT
                      ____________________________________________________________
consensus             TCTCAATTATTCGTTTAATTTTTCAAAGATGGAAAATGATTTATTTTCGACCTACTCGCT
 
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rJMFF008K18+          GCATATATAATTATGCTTGTGTAGTTGTGTTACCTCAATATATTTGCATGCATGC     
JMFS137B11-           GCATATATAATTATGCTTGTGTAGTTGTGTTACCTCAATATATTTGCATGCATGCATGCA
                      ____________________________________________________________
consensus             GCATATATAATTATGCTTGTGTAGTTGTGTTACCTCAATATATTTGCATGCATGCATGCA