Contig 009110:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS033A08Sequence653009110 (2)
JMFS135A04Sequence635009110 (2)emb|CAN78407.1|8e-57hypothetical protein VITISV_023176 [Vitis vinifera]

Alignment

This contig is upended


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JMFS033A08+                                   CTTAAATCATCAAAGTCGCCAAAGAGGAGCCGCTCA
                      ____________________________________________________________
consensus                                     CTTAAATCATCAAAGTCGCCAAAGAGGAGCCGCTCA
 
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JMFS033A08+           TCTTCCCCTTCCTCCGAGCTTACTGATGTTACAGTGCTGTGGAAGGAACAAAGACGATCA
                      ____________________________________________________________
consensus             TCTTCCCCTTCCTCCGAGCTTACTGATGTTACAGTGCTGTGGAAGGAACAAAGACGATCA
 
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JMFS033A08+           GATTCAAGACGACGAAGCTGGCTACTTCTATCGTCTTTTGTACTACTTTTCTCGACTTGT
                      ____________________________________________________________
consensus             GATTCAAGACGACGAAGCTGGCTACTTCTATCGTCTTTTGTACTACTTTTCTCGACTTGT
 
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JMFS033A08+           GCCTCGTGAGTCGAGTTAATAATACTCGGGATGGCAAAAATGCCCGGCACTTCTCCATCC
                      ____________________________________________________________
consensus             GCCTCGTGAGTCGAGTTAATAATACTCGGGATGGCAAAAATGCCCGGCACTTCTCCATCC
 
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JMFS033A08+           TCGTGAGAACAATTAATCGGATGGGAATAGAGAGGCGGGGAATAAGCTTCAGTATCGTGA
                      ____________________________________________________________
consensus             TCGTGAGAACAATTAATCGGATGGGAATAGAGAGGCGGGGAATAAGCTTCAGTATCGTGA
 
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JMFS033A08+           TTTGGTGTGTTTGAAGAAGTCACATCACTTTCGATAGGTTCTTGATCATGGAACGAACTT
                      ____________________________________________________________
consensus             TTTGGTGTGTTTGAAGAAGTCACATCACTTTCGATAGGTTCTTGATCATGGAACGAACTT
 
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JMFS033A08+           TTGTCCCCGATACTGACTTCAATAGCAGAAGTTTCAGTATTCTCTAATGCCGGGAAACTA
                      ____________________________________________________________
consensus             TTGTCCCCGATACTGACTTCAATAGCAGAAGTTTCAGTATTCTCTAATGCCGGGAAACTA
 
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JMFS033A08+           TCAACGCTTTTATGATCCAGCAAAGCGTTTTCCAGAGAATCCAATTTATCTGATACGCTT
                      ____________________________________________________________
consensus             TCAACGCTTTTATGATCCAGCAAAGCGTTTTCCAGAGAATCCAATTTATCTGATACGCTT
 
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JMFS033A08+           TTATTGTCATTTTTCGAGTCCCCCTTTGACACATCTTGTGAAGAAAGATTTGATGCATTA
                      ____________________________________________________________
consensus             TTATTGTCATTTTTCGAGTCCCCCTTTGACACATCTTGTGAAGAAAGATTTGATGCATTA
 
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JMFS033A08+           TTATCTTTAATGCATTTGGGGGCTTCGTAATTGGTAGTCCATTTCATCTCCAGAAGATCA
JMFS135A04+                                    CGTAATTGGTAGTCCATTTCATCTCCAGAAGATCA
                      ____________________________________________________________
consensus             TTATCTTTAATGCATTTGGGGGCTTCGTAATTGGTAGTCCATTTCATCTCCAGAAGATCA
 
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JMFS033A08+           GCAGCAATCTCGGCATGCTCCAAATGATTATCCTTAACACCACTATCCTCCTTCTCGTTC
JMFS135A04+           GCAGCAATCTCGGCATGCTCCAAATGATTATCCTTAACACCACTATCCTCCTTCTCGTTC
                      ____________________________________________________________
consensus             GCAGCAATCTCGGCATGCTCCAAATGATTATCCTTAACACCACTATCCTCCTTCTCGTTC
 
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JMFS033A08+           TCCGAAAGACTGCCTTC                                           
JMFS135A04+           TCCGAAAGACTGCCTTCTTTGACACTCGTTTTCCTGCCAAAAACATACCCAAGAAACCCC
                      ____________________________________________________________
consensus             TCCGAAAGACTGCCTTCTTTGACACTCGTTTTCCTGCCAAAAACATACCCAAGAAACCCC
 
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JMFS135A04+           GTTCGTTGCCACTTTGTCCTAACCACGCCATTCCCATTCCCCAAATCAATCTTGGTAGCT
                      ____________________________________________________________
consensus             GTTCGTTGCCACTTTGTCCTAACCACGCCATTCCCATTCCCCAAATCAATCTTGGTAGCT
 
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JMFS135A04+           GCAACCGTGTCCACACCTTCAAAACTGCAACTTTTCGACTTCACTGACAGTCTAGTATCC
                      ____________________________________________________________
consensus             GCAACCGTGTCCACACCTTCAAAACTGCAACTTTTCGACTTCACTGACAGTCTAGTATCC
 
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JMFS135A04+           GCCAGTTCCTCGGCATCATCACCATCCCAAGGCGGGGGAGACGAGGGGCTCTCCTCCCCG
                      ____________________________________________________________
consensus             GCCAGTTCCTCGGCATCATCACCATCCCAAGGCGGGGGAGACGAGGGGCTCTCCTCCCCG
 
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JMFS135A04+           TCCTCTACATCCACCTCGGTTAGAAAACACGCCTGCCCATCGTTCTCCAGACACATATGG
                      ____________________________________________________________
consensus             TCCTCTACATCCACCTCGGTTAGAAAACACGCCTGCCCATCGTTCTCCAGACACATATGG
 
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JMFS135A04+           AAATCCATTTCCACACCATTCACACATATCTTAACCACCTTCTCTTTTGCCTTCAGGACG
                      ____________________________________________________________
consensus             AAATCCATTTCCACACCATTCACACATATCTTAACCACCTTCTCTTTTGCCTTCAGGACG
 
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JMFS135A04+           CCCTGAAACTTCCCAAACCGAACATACCAAGGAGAGGATTTGAAACTATCGTCCTGTTGC
                      ____________________________________________________________
consensus             CCCTGAAACTTCCCAAACCGAACATACCAAGGAGAGGATTTGAAACTATCGTCCTGTTGC
 
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JMFS135A04+           CTCACCACAATGATATCCACAGCCCCACCAAACGGATGGAATGGCGTGGAAACAGTATAC
                      ____________________________________________________________
consensus             CTCACCACAATGATATCCACAGCCCCACCAAACGGATGGAATGGCGTGGAAACAGTATAC
 
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JMFS135A04+           ACGCTTCGAGAAATATAGCTGCCAAGCCTCCCCACTGCATTCATCTTCTCACAATATTCG
                      ____________________________________________________________
consensus             ACGCTTCGAGAAATATAGCTGCCAAGCCTCCCCACTGCATTCATCTTCTCACAATATTCG