Contig 009106:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF044N11+                                               ATGCCGACCGGGCAGCTTGGCAAT
                      ____________________________________________________________
consensus                                                 ATGCCGACCGGGCAGCTTGGCAAT
 
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JMFF044N11+           CNAGTAGGTGCAGGCATAGCAGGAGATACACCAGAAAGATCTGGTTCAGCACATACATCA
                      ____________________________________________________________
consensus             CNAGTAGGTGCAGGCATAGCAGGAGATACACCAGAAAGATCTGGTTCAGCACATACATCA
 
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JMFF044N11+           TCATTATCCCAATCTTCCTCAATAAATGGCCTTCCATACTGTGAGCCATTTTTGGGGCCA
                      ____________________________________________________________
consensus             TCATTATCCCAATCTTCCTCAATAAATGGCCTTCCATACTGTGAGCCATTTTTGGGGCCA
 
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JMFF044N11+           GATCCAGTCTTCTCAAATACTTTACAGATCACATATGAATCCTGAACAATTCTTGCATCT
                      ____________________________________________________________
consensus             GATCCAGTCTTCTCAAATACTTTACAGATCACATATGAATCCTGAACAATTCTTGCATCT
 
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JMFF044N11+           GCCAAATGCTTGTCCTCCATCCGGTACTCATGTATAACCCAATCTGTTCTTATCCCTTTG
JMSF009G01+                                                                      G
                      ____________________________________________________________
consensus             GCCAAATGCTTGTCCTCCATCCGGTACTCATGTATAACCCAATCTGTTCTTATCCCTTTG
 
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JMFF044N11+           CCCGCATGACCTTGGTGGAAAATTAAAGTTTTAATCTTTCCAACAGTTCGTCCTTTATAA
JMSF009G01+           CCCGCATGACCTTGGTGGAAAATTAAAGTTTTAATCTTTCCAACAGTTCGTCCTTTATAA
                      ____________________________________________________________
consensus             CCCGCATGACCTTGGTGGAAAATTAAAGTTTTAATCTTTCCAACAGTTCGTCCTTTATAA
 
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JMFF044N11+           GTAACAGTTCTATCATTCCCTGTGGCTTTCCAGAAACCAGTCTCATTTGCCCGCTTCATT
JMSF009G01+           GTAACAGTTCTATCATTCCCTGTGGCTTTCCAGAAACCAGTCTCATTTGCCCGCTTCATT
JMFS132F09+                                                      CATTTGCCCGCTTCATT
                      ____________________________________________________________
consensus             GTAACAGTTCTATCATTCCCTGTGGCTTTCCAGAAACCAGTCTCATTTGCCCGCTTCATT
 
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JMFF044N11+           CTAGACCCACTTGCATACTTCTTTTCTATTGGACAAAAGAAATACCACTCAAGATCTTTA
JMSF009G01+           CTAGACCCACTTGCATACTTCTTTTCTATTGGACAAAAGAAATACCACTCAAGATCTTTA
JMFS132F09+           CTAGACCCACTTGCATACTTCTTTTCTATTGGACAAAAGAAATACCACTCAAGATCTTTA
                      ____________________________________________________________
consensus             CTAGACCCACTTGCATACTTCTTTTCTATTGGACAAAAGAAATACCACTCAAGATCTTTA
 
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JMFF044N11+           CTTCTAGATTTTCCAGGAAGCTCCCATGGGGCATAAAGACGAATATTGAGCTCTGGTATA
JMSF009G01+           CTTCTAGATTTTCCAGGAAGCTCCCATGGGGCATAAAGACGAATATTGAGCTCTGGTATA
JMFS132F09+           CTTCTAGATTTTCCAGGAAGCTCCCATGGGGCATAAAGACGAATATTGAGCTCTGGTATA
                      ____________________________________________________________
consensus             CTTCTAGATTTTCCAGGAAGCTCCCATGGGGCATAAAGACGAATATTGAGCTCTGGTATA
 
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JMFF044N11+           GCACGCTTAGCTTCAGAATGAAGTTTTCTTCCTGTGACCTTGCGCTTTAGGTAGTACATG
JMSF009G01+           GCACGCTTAGCTTCAGAATGAAGTTTTCTTCCTGTGACCTTGCGCTTTAGGTAGTACATG
JMFS132F09+           GCACGCTTAGCTTCAGAATGAAGTTTTCTTCCTGTGACCTTGCGCTTTAGGTAGTACATG
                      ____________________________________________________________
consensus             GCACGCTTAGCTTCAGAATGAAGTTTTCTTCCTGTGACCTTGCGCTTTAGGTAGTACATG
 
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JMFF044N11+           ATCAGCTCTTCATCAGTTGGATGAAAGCGAAATCCTGGAGGAAGGGTTGTATTTGCCATA
JMSF009G01+           ATCAGCTCTTCATCAGTTGGATGAAAGCGAAATCCTGGAGGAAGGGTTGTATTTGCCATA
JMFS132F09+           ATCAGCTCTTCATCAGTTGGATGAAAGCGAAATCCTGGAGGAAGGGTTGTATTTGCCATA
                      ____________________________________________________________
consensus             ATCAGCTCTTCATCAGTTGGATGAAAGCGAAATCCTGGAGGAAGGGTTGTATTTGCCATA
 
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JMFF044N11+           CAGTA                                                       
JMSF009G01+           CAGTAATGGCGAAAGAACA                                         
JMFS132F09+           CAGTAATGGCGAAAGAACACCACGCAGCTGAGTGAAGTAAATGACCCTCCCTCCCCCCAA
                      ____________________________________________________________
consensus             CAGTAATGGCGAAAGAACACCACGCAGCTGAGTGAAGTAAATGACCCTCCCTCCCCCCAA
 
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JMFS132F09+           AAAAAGAAAAAGAAAAAGAATCTAAAGTTCGTTGAGAAGGGAAATACCAACTGACAACAG
                      ____________________________________________________________
consensus             AAAAAGAAAAAGAAAAAGAATCTAAAGTTCGTTGAGAAGGGAAATACCAACTGACAACAG
 
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JMFS132F09+           TATTGTCTCCCTTGCACACTGCAGTCAACTAATTGTCAAGTCCAATGCCGAAATAAGATC
                      ____________________________________________________________
consensus             TATTGTCTCCCTTGCACACTGCAGTCAACTAATTGTCAAGTCCAATGCCGAAATAAGATC
 
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JMFS132F09+           TTCAGTGCACACCACAACCTTCCCTGATTCATGAAAAAGAAAGAACCCCGAACAAAGAAT
                      ____________________________________________________________
consensus             TTCAGTGCACACCACAACCTTCCCTGATTCATGAAAAAGAAAGAACCCCGAACAAAGAAT
 
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JMFS132F09+           CGATGCTTCTCACAAGAATCAATAGACATTTGGAGCACAACACAGACCCGATAGAGGGAA
                      ____________________________________________________________
consensus             CGATGCTTCTCACAAGAATCAATAGACATTTGGAGCACAACACAGACCCGATAGAGGGAA
 
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JMFS132F09+           ATGGAGGGAGGAGGGTGACGCGGAAGAAGACGGCGAAAGGCGGAGGAGGGCTAATAGGAA
                      ____________________________________________________________
consensus             ATGGAGGGAGGAGGGTGACGCGGAAGAAGACGGCGAAAGGCGGAGGAGGGCTAATAGGAA