Contig 009104:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS060F05+                                                                  TCCCG
                      ____________________________________________________________
consensus                                                                    TCCCG
 
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JMFS060F05+           AAATGATGAGACCTAAGCCAGCATGGAACACATAGTATAAGATAAGAATATTATGTTCTC
JMFS097E11+                                          ATAGTATAAGATAAGAATATTATGTTCTC
                      ____________________________________________________________
consensus             AAATGATGAGACCTAAGCCAGCATGGAACACATAGTATAAGATAAGAATATTATGTTCTC
 
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JMFS060F05+           TTCCTTTTTTACAATACTGATCACCCAACCATTTGATGCTCAAACTGGCTTAGCTCCCAT
JMFS097E11+           TTCCTTTTTTACAATACTGATCACCCAACCATTTGATGCTCAAACTGGCTTAGCTCCCAT
                      ____________________________________________________________
consensus             TTCCTTTTTTACAATACTGATCACCCAACCATTTGATGCTCAAACTGGCTTAGCTCCCAT
 
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JMFS060F05+           AAAATCAGACGTCTTAGAGGTGAATAATATGAAGTGAAATAGCCAAAAAAAAAAAAAACA
JMFS097E11+           AAAATCAGACGTCTTAGAGGTGAATAATATGAAGTGAAATAGCCAAAAAAAAAAAAAACA
JMFS129H04+                                                                      A
                      ____________________________________________________________
consensus             AAAATCAGACGTCTTAGAGGTGAATAATATGAAGTGAAATAGCCAAAAAAAAAAAAAACA
 
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JMFS060F05+           AACACTTGTTCTAGACATAGTAGGAGAAAGAAAGGTAGAAAGTAGAAACAGATCTCTCCA
JMFS097E11+           AACACTTGTTCTAGACATAGTAGGAGAAAGAAAGGTAGAAAGTAGAAACAGATCTCTCCA
JMFS129H04+           AACACTTGTTCTAGACATAGTAGGAGAAAGAAAGGTAGAAAGTAGAAACAGATCTCTCCA
                      ____________________________________________________________
consensus             AACACTTGTTCTAGACATAGTAGGAGAAAGAAAGGTAGAAAGTAGAAACAGATCTCTCCA
 
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JMFS060F05+           CCATTCTTTACTGTTTCACGCTTACAATTCTAACCAAGAAAAGAACATTGCTTTCTTGCC
JMFS097E11+           CCATTCTTTACTGTTTCACGCTTACAATTCTAACCAAGAAAAGAACATTGCTTTCTTGCC
JMFS129H04+           CCATTCTTTACTGTTTCACGCTTACAATTCTAACCAAGAAAAGAACATTGCTTTCTTGCC
                      ____________________________________________________________
consensus             CCATTCTTTACTGTTTCACGCTTACAATTCTAACCAAGAAAAGAACATTGCTTTCTTGCC
 
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JMFS060F05+           AACAGAAGCAAAGGAGGAGACTTGTCAACACAGAGAACTAAAGAAACCCAGCCAAAAAAA
JMFS097E11+           AACAGAAGCAAAGGAGGAGACTTGTCAACACAGAGAACTAAAGAAACCCAGCCAAAAAAA
JMFS129H04+           AACAGAAGCAAAGGAGGAGACTTGTCAACACAGAGAACTAAAGAAACCCAGCCAAAAAAA
                      ____________________________________________________________
consensus             AACAGAAGCAAAGGAGGAGACTTGTCAACACAGAGAACTAAAGAAACCCAGCCAAAAAAA
 
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JMFS060F05+           ATAAAAAATAAAAAATAAAACAGGAAGCCAAGCTGACAAGGGCTTTTTGCTAGTTTGAAA
JMFS097E11+           ATAAAAAATAAAAAATAAAACAGGAAGCCAAGCTGACAAGGGCTTTTTGCTAGTTTGAAA
JMFS129H04+           ATAAAAAATAAAAAATAAAACAGGAAGCCAAGCTGACAAGGGCTTTTTGCTAGTTTGAAA
                      ____________________________________________________________
consensus             ATAAAAAATAAAAAATAAAACAGGAAGCCAAGCTGACAAGGGCTTTTTGCTAGTTTGAAA
 
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JMFS060F05+           ATGAAGTAAAAGGGTCACCGTTAACCAGAGGCAAATCAACCCAATCACACCGCAGGATTT
JMFS097E11+           ATGAAGTAAAAGGGTCACCGTTAACCAGAGGCAAATCAACCCAATCACACCGCAGGATTT
JMFS129H04+           ATGAAGTAAAAGGGTCACCGTTAACCAGAGGCAAATCAACCCAATCACACCGCAGGATTT
                      ____________________________________________________________
consensus             ATGAAGTAAAAGGGTCACCGTTAACCAGAGGCAAATCAACCCAATCACACCGCAGGATTT
 
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JMFS060F05+           CCTTTTTAAAGAGCGCGAATCATGGCTTTTACCACAAAACCTAAAGCCCAAACCTAAATA
JMFS097E11+           CCTTTTTAAAGAGCGCGAATCATGGCTTTTACCACAAAACCTAAAGCCCAAACCTAAATA
JMFS129H04+           CCTTTTTAAAGAGCGCGAATCATGGCTTTTACCACAAAACCTAAAGCCCAAACCTAAATA
                      ____________________________________________________________
consensus             CCTTTTTAAAGAGCGCGAATCATGGCTTTTACCACAAAACCTAAAGCCCAAACCTAAATA
 
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JMFS060F05+           AAGCCACTTCTCTAATTACTGTGATGTGACTAACTAAAGATTAACAAACAGTTAAATACT
JMFS097E11+           AAGCCACTTCTCTAATTACTGTGATGTGACTAACTAAAGATTAACAAACAGTTAAATACT
JMFS129H04+           AAGCCACTTCTCTAATTACTGTGATGTGACTAACTAAAGATTAACAAACAGTTAAATACT
                      ____________________________________________________________
consensus             AAGCCACTTCTCTAATTACTGTGATGTGACTAACTAAAGATTAACAAACAGTTAAATACT
 
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JMFS060F05+           TAAATCCAATGGTAAAATGGC                                       
JMFS097E11+           TAAATCCAATGGTAAAATGGCAAGAACATTCAAAGA                        
JMFS129H04+           TAAATCCAATGGTAAAATGGCAAGAACATTCAAAGACCGCCGGACTATAGATTCTACGAA
                      ____________________________________________________________
consensus             TAAATCCAATGGTAAAATGGCAAGAACATTCAAAGACCGCCGGACTATAGATTCTACGAA
 
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JMFS129H04+           AAACTCAGATATCTATGCTATTAGGTGGCAGTGGTGACAACAAAGTTTTCACTGAGATGG
                      ____________________________________________________________
consensus             AAACTCAGATATCTATGCTATTAGGTGGCAGTGGTGACAACAAAGTTTTCACTGAGATGG
 
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JMFS129H04+           AAATGGTAGCAATCGGAGTAAATGCGCCCCATTGATTGAGCTGCCGATATGGGAAAGTTT
                      ____________________________________________________________
consensus             AAATGGTAGCAATCGGAGTAAATGCGCCCCATTGATTGAGCTGCCGATATGGGAAAGTTT